RNA–Protein interactions for RNA: ENST00000615310.4

RET-205, Transcript of ret proto-oncogene, humanhuman

TSL 5 BASIC

Gene RET, Length 4,337 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-205ENST00000615310 NISCHQ9Y2I1 1504 aa25.99■■□□□ 1.75
RET-205ENST00000615310 DCAF8L2P0C7V8 631 aa25.19■■□□□ 1.62
RET-205ENST00000615310 SUPT5HO00267 1087 aaKnown RBP24.43■■□□□ 1.5
RET-205ENST00000615310 SHROOM4Q9ULL8 1493 aa24.36■■□□□ 1.49
RET-205ENST00000615310 EHMT2Q96KQ7 1210 aa23.3■■□□□ 1.32
RET-205ENST00000615310 FAM9AQ8IZU1 332 aaPredicted RBP22.91■■□□□ 1.26
RET-205ENST00000615310 PCGF6Q9BYE7 350 aa22.81■■□□□ 1.24
RET-205ENST00000615310 TRIM41Q8WV44 630 aa22.52■■□□□ 1.2
RET-205ENST00000615310 TTBK1Q5TCY1 1321 aaPredicted RBP22.47■■□□□ 1.19
RET-205ENST00000615310 CHIC1Q5VXU3 224 aa22.38■■□□□ 1.17
RET-205ENST00000615310 LOC105371045A0A1W2PR82 267 aa22.26■■□□□ 1.15
RET-205ENST00000615310 RANGAP1P46060 587 aaPredicted RBP22.16■■□□□ 1.14
RET-205ENST00000615310 APLP2Q06481 763 aa22.12■■□□□ 1.13
RET-205ENST00000615310 PPARGC1BQ86YN6 1023 aaKnown RBP22.12■■□□□ 1.13
RET-205ENST00000615310 UBTFP17480 764 aaKnown RBP21.97■■□□□ 1.11
RET-205ENST00000615310 CCER1Q8TC90 406 aaPredicted RBP21.91■■□□□ 1.1
RET-205ENST00000615310 HRCP23327 699 aa21.89■■□□□ 1.09
RET-205ENST00000615310 TRIM26Q12899 539 aaPredicted RBP21.85■■□□□ 1.09
RET-205ENST00000615310 ABCC9O60706 1549 aa21.82■■□□□ 1.08
RET-205ENST00000615310 ZEB1P37275 1124 aaPredicted RBP21.8■■□□□ 1.08
RET-205ENST00000615310 ZCCHC6Q5VYS8 1495 aaKnown RBP21.65■■□□□ 1.06
RET-205ENST00000615310 ATP1B4Q9UN42 357 aaPredicted RBP21.6■■□□□ 1.05
RET-205ENST00000615310 PABPN1Q86U42 306 aaKnown RBP eCLIP21.57■■□□□ 1.04
RET-205ENST00000615310 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.36■■□□□ 1.01
RET-205ENST00000615310 CENPBP07199 599 aaPredicted RBP21.35■■□□□ 1.01
RET-205ENST00000615310 HNRNPUL2Q1KMD3 747 aaKnown RBP21.34■■□□□ 1.01
RET-205ENST00000615310 YTHDC1Q96MU7 727 aaKnown RBP21.33■■□□□ 1
RET-205ENST00000615310 ITGAEP38570 1179 aa21.26■□□□□ 0.99
RET-205ENST00000615310 CCDC180Q9P1Z9 1646 aa21.24■□□□□ 0.99
RET-205ENST00000615310 SCRIBQ14160 1630 aa21.23■□□□□ 0.99
RET-205ENST00000615310 PELP1Q8IZL8 1130 aaKnown RBP21.16■□□□□ 0.98
RET-205ENST00000615310 MYO15BQ96JP2 1530 aa21.12■□□□□ 0.97
RET-205ENST00000615310 CSRNP3Q8WYN3 585 aa20.94■□□□□ 0.94
RET-205ENST00000615310 DIEXFQ68CQ4 756 aaKnown RBP20.91■□□□□ 0.94
RET-205ENST00000615310 RSF1Q96T23 1441 aaPredicted RBP20.88■□□□□ 0.93
RET-205ENST00000615310 DCAF1Q9Y4B6 1507 aa20.83■□□□□ 0.93
RET-205ENST00000615310 FAM50AQ14320 339 aaKnown RBP20.72■□□□□ 0.91
RET-205ENST00000615310 P3H3Q8IVL6 736 aa20.63■□□□□ 0.89
RET-205ENST00000615310 NEFLP07196 543 aa20.61■□□□□ 0.89
RET-205ENST00000615310 CECR2Q9BXF3 1484 aa20.58■□□□□ 0.89
RET-205ENST00000615310 NEUROD1Q13562 356 aa20.58■□□□□ 0.88
RET-205ENST00000615310 CNGB1Q14028 1251 aaPredicted RBP20.57■□□□□ 0.88
RET-205ENST00000615310 POLR3GLQ9BT43 218 aa20.55■□□□□ 0.88
RET-205ENST00000615310 ZNF316A6NFI3 1004 aaPredicted RBP20.52■□□□□ 0.88
RET-205ENST00000615310 GTF3C3Q9Y5Q9 886 aa20.48■□□□□ 0.87
RET-205ENST00000615310 NACADO15069 1562 aa20.44■□□□□ 0.86
RET-205ENST00000615310 RB1CC1Q8TDY2 1594 aa20.43■□□□□ 0.86
RET-205ENST00000615310 ARID3CA6NKF2 412 aa20.4■□□□□ 0.86
RET-205ENST00000615310 TRIM52Q96A61 297 aa20.39■□□□□ 0.85
RET-205ENST00000615310 MYT1Q01538 1121 aa20.36■□□□□ 0.85
RET-205ENST00000615310 ERICH6Q7L0X2 663 aa20.35■□□□□ 0.85
RET-205ENST00000615310 ACIN1Q9UKV3 1341 aaKnown RBP20.31■□□□□ 0.84
RET-205ENST00000615310 CEP162Q5TB80 1403 aa20.29■□□□□ 0.84
RET-205ENST00000615310 MROH2BQ7Z745 1585 aa20.29■□□□□ 0.84
RET-205ENST00000615310 FBLN2P98095 1184 aa20.29■□□□□ 0.84
RET-205ENST00000615310 MYT1LQ9UL68 1186 aa20.28■□□□□ 0.84
RET-205ENST00000615310 SCAF1Q9H7N4 1312 aaKnown RBP20.27■□□□□ 0.84
RET-205ENST00000615310 CLIP1P30622 1438 aa20.26■□□□□ 0.83
RET-205ENST00000615310 WRNQ14191 1432 aaPredicted RBP eCLIP20.23■□□□□ 0.83
RET-205ENST00000615310 BAZ1AQ9NRL2 1556 aaPredicted RBP20.2■□□□□ 0.82
RET-205ENST00000615310 BCANQ96GW7 911 aa20.19■□□□□ 0.82
RET-205ENST00000615310 SOGA1O94964 1423 aa20.17■□□□□ 0.82
RET-205ENST00000615310 ZNF326Q5BKZ1 582 aaKnown RBP20.15■□□□□ 0.82
RET-205ENST00000615310 GOLGA3Q08378 1498 aa20.13■□□□□ 0.81
RET-205ENST00000615310 TNIKQ9UKE5 1360 aa20.12■□□□□ 0.81
RET-205ENST00000615310 EEA1Q15075 1411 aa20.11■□□□□ 0.81
RET-205ENST00000615310 BAZ1BQ9UIG0 1483 aaKnown RBP20.11■□□□□ 0.81
RET-205ENST00000615310 ANP32CO43423 234 aa20.09■□□□□ 0.81
RET-205ENST00000615310 ABCC8Q09428 1581 aa20.06■□□□□ 0.8
RET-205ENST00000615310 CCDC88BA6NC98 1476 aa20.05■□□□□ 0.8
RET-205ENST00000615310 MIER1Q8N108 512 aa20.05■□□□□ 0.8
RET-205ENST00000615310 ZNF777Q9ULD5 760 aaPredicted RBP20.02■□□□□ 0.8
RET-205ENST00000615310 DDX10Q13206 875 aaKnown RBP20.01■□□□□ 0.79
RET-205ENST00000615310 WIZO95785 1651 aa20■□□□□ 0.79
RET-205ENST00000615310 CHIC2Q9UKJ5 165 aa20■□□□□ 0.79
RET-205ENST00000615310 HIRIP3Q9BW71 556 aaPredicted RBP19.97■□□□□ 0.79
RET-205ENST00000615310 CEP164Q9UPV0 1460 aa19.96■□□□□ 0.79
RET-205ENST00000615310 TONSLQ96HA7 1378 aa19.9■□□□□ 0.78
RET-205ENST00000615310 KIF27Q86VH2 1401 aa19.87■□□□□ 0.77
RET-205ENST00000615310 MTUS2Q5JR59 1369 aa19.85■□□□□ 0.77
RET-205ENST00000615310 SLC4A1APQ9BWU0 796 aaKnown RBP19.85■□□□□ 0.77
RET-205ENST00000615310 CDK11AQ9UQ88 783 aaPredicted RBP19.83■□□□□ 0.76
RET-205ENST00000615310 RRP7BPQ9NSQ0 103 aa19.78■□□□□ 0.76
RET-205ENST00000615310 KANK4Q5T7N3 995 aaPredicted RBP19.76■□□□□ 0.75
RET-205ENST00000615310 RUSC2Q8N2Y8 1516 aa19.74■□□□□ 0.75
RET-205ENST00000615310 FKBP8Q14318 412 aa19.74■□□□□ 0.75
RET-205ENST00000615310 TOP2AP11388 1531 aaKnown RBP19.73■□□□□ 0.75
RET-205ENST00000615310 SIN3AQ96ST3 1273 aa19.72■□□□□ 0.75
RET-205ENST00000615310 HNRNPUQ00839 825 aaKnown RBP eCLIP19.7■□□□□ 0.74
RET-205ENST00000615310 VPS8Q8N3P4 1428 aa19.68■□□□□ 0.74
RET-205ENST00000615310 CUX2O14529 1486 aa19.68■□□□□ 0.74
RET-205ENST00000615310 FAM9BQ8IZU0 186 aa19.66■□□□□ 0.74
RET-205ENST00000615310 CARMIL1Q5VZK9 1371 aa19.65■□□□□ 0.74
RET-205ENST00000615310 CHMP7Q8WUX9 453 aaPredicted RBP19.64■□□□□ 0.73
RET-205ENST00000615310 CCNB3Q8WWL7 1395 aa19.62■□□□□ 0.73
RET-205ENST00000615310 SMARCA4P51532 1647 aa19.6■□□□□ 0.73
RET-205ENST00000615310 DAXXQ9UER7 740 aaPredicted RBP19.6■□□□□ 0.73
RET-205ENST00000615310 ATAD2BQ9ULI0 1458 aa19.57■□□□□ 0.72
RET-205ENST00000615310 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.57■□□□□ 0.72
RET-205ENST00000615310 KDM2AQ9Y2K7 1162 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms