RNA–Protein interactions for RNA: ENST00000485403.6

ERCC2-205, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-205ENST00000485403 NISCHQ9Y2I1 1504 aa44.24■■■■■ 4.67
ERCC2-205ENST00000485403 CCDC180Q9P1Z9 1646 aa39.23■■■■□ 3.87
ERCC2-205ENST00000485403 ABCC9O60706 1549 aa37.99■■■■□ 3.67
ERCC2-205ENST00000485403 ZCCHC6Q5VYS8 1495 aaKnown RBP36.94■■■■□ 3.5
ERCC2-205ENST00000485403 NACADO15069 1562 aa36.78■■■■□ 3.48
ERCC2-205ENST00000485403 RB1CC1Q8TDY2 1594 aa36.73■■■■□ 3.47
ERCC2-205ENST00000485403 MYO15BQ96JP2 1530 aa36.72■■■■□ 3.47
ERCC2-205ENST00000485403 DCAF8L2P0C7V8 631 aa36.67■■■■□ 3.46
ERCC2-205ENST00000485403 DCAF1Q9Y4B6 1507 aa36.66■■■■□ 3.46
ERCC2-205ENST00000485403 UNC13AQ9UPW8 1703 aa35.97■■■■□ 3.35
ERCC2-205ENST00000485403 SCRIBQ14160 1630 aa35.75■■■■□ 3.31
ERCC2-205ENST00000485403 BICRAQ9NZM4 1560 aa35.65■■■■□ 3.3
ERCC2-205ENST00000485403 PABPN1Q86U42 306 aaKnown RBP eCLIP35.52■■■■□ 3.28
ERCC2-205ENST00000485403 SHROOM4Q9ULL8 1493 aa35.32■■■■□ 3.24
ERCC2-205ENST00000485403 EIF4G1Q04637 1599 aaKnown RBP34.66■■■■□ 3.14
ERCC2-205ENST00000485403 DNAJC5BQ9UF47 199 aa34.6■■■■□ 3.13
ERCC2-205ENST00000485403 CC2D2AQ9P2K1 1620 aa34.43■■■■□ 3.1
ERCC2-205ENST00000485403 CECR2Q9BXF3 1484 aa34.41■■■■□ 3.1
ERCC2-205ENST00000485403 SMARCA4P51532 1647 aa34.27■■■■□ 3.08
ERCC2-205ENST00000485403 BAZ1AQ9NRL2 1556 aaPredicted RBP34.27■■■■□ 3.08
ERCC2-205ENST00000485403 MROH2BQ7Z745 1585 aa34.08■■■■□ 3.05
ERCC2-205ENST00000485403 ATAD2BQ9ULI0 1458 aa33.99■■■■□ 3.03
ERCC2-205ENST00000485403 PEG3Q9GZU2 1588 aa33.98■■■■□ 3.03
ERCC2-205ENST00000485403 SMARCA2P51531 1590 aa33.97■■■■□ 3.03
ERCC2-205ENST00000485403 NCAPD3P42695 1498 aa33.94■■■■□ 3.02
ERCC2-205ENST00000485403 HMGXB3Q12766 1538 aa33.82■■■■□ 3
ERCC2-205ENST00000485403 RSF1Q96T23 1441 aaPredicted RBP33.81■■■■□ 3
ERCC2-205ENST00000485403 WIZO95785 1651 aa33.74■■■□□ 2.99
ERCC2-205ENST00000485403 BAZ1BQ9UIG0 1483 aaKnown RBP33.71■■■□□ 2.99
ERCC2-205ENST00000485403 TOP2AP11388 1531 aaKnown RBP33.41■■■□□ 2.94
ERCC2-205ENST00000485403 SUPT5HO00267 1087 aaKnown RBP33.07■■■□□ 2.89
ERCC2-205ENST00000485403 CCDC88BA6NC98 1476 aa32.99■■■□□ 2.87
ERCC2-205ENST00000485403 NESP48681 1621 aa32.99■■■□□ 2.87
ERCC2-205ENST00000485403 LAMC3Q9Y6N6 1575 aa32.99■■■□□ 2.87
ERCC2-205ENST00000485403 CADPSQ9ULU8 1353 aa32.93■■■□□ 2.86
ERCC2-205ENST00000485403 CFTRP13569 1480 aa32.83■■■□□ 2.85
ERCC2-205ENST00000485403 PDS5BQ9NTI5 1447 aa32.72■■■□□ 2.83
ERCC2-205ENST00000485403 ERCC6Q03468 1493 aa32.71■■■□□ 2.83
ERCC2-205ENST00000485403 PRDM2Q13029 1718 aa32.66■■■□□ 2.82
ERCC2-205ENST00000485403 KIF21AQ7Z4S6 1674 aa32.65■■■□□ 2.82
ERCC2-205ENST00000485403 FANCD2Q9BXW9 1451 aa32.56■■■□□ 2.8
ERCC2-205ENST00000485403 CEP164Q9UPV0 1460 aa32.49■■■□□ 2.79
ERCC2-205ENST00000485403 THOC2Q8NI27 1593 aaKnown RBP32.47■■■□□ 2.79
ERCC2-205ENST00000485403 MRC2Q9UBG0 1479 aa32.38■■■□□ 2.77
ERCC2-205ENST00000485403 CUX2O14529 1486 aa32.31■■■□□ 2.76
ERCC2-205ENST00000485403 WDR62O43379 1518 aa32.3■■■□□ 2.76
ERCC2-205ENST00000485403 URB2Q14146 1524 aaKnown RBP32.23■■■□□ 2.75
ERCC2-205ENST00000485403 ABCC8Q09428 1581 aa32.1■■■□□ 2.73
ERCC2-205ENST00000485403 DNMBPQ6XZF7 1577 aa32.09■■■□□ 2.73
ERCC2-205ENST00000485403 TOPBP1Q92547 1522 aa32.08■■■□□ 2.73
ERCC2-205ENST00000485403 CUX1P39880 1505 aa31.97■■■□□ 2.71
ERCC2-205ENST00000485403 WRNQ14191 1432 aaPredicted RBP eCLIP31.85■■■□□ 2.69
ERCC2-205ENST00000485403 POLA1P09884 1462 aaPredicted RBP31.84■■■□□ 2.69
ERCC2-205ENST00000485403 IFT140Q96RY7 1462 aa31.8■■■□□ 2.68
ERCC2-205ENST00000485403 BIVM-ERCC5R4GMW8 1640 aa31.8■■■□□ 2.68
ERCC2-205ENST00000485403 FGD5Q6ZNL6 1462 aa31.79■■■□□ 2.68
ERCC2-205ENST00000485403 SYNJ1O43426 1573 aa31.79■■■□□ 2.68
ERCC2-205ENST00000485403 TOP2BQ02880 1626 aa31.79■■■□□ 2.68
ERCC2-205ENST00000485403 TARBP1Q13395 1621 aaKnown RBP31.74■■■□□ 2.67
ERCC2-205ENST00000485403 SOGA1O94964 1423 aa31.67■■■□□ 2.66
ERCC2-205ENST00000485403 RAD54L2Q9Y4B4 1467 aa31.66■■■□□ 2.66
ERCC2-205ENST00000485403 ZNF608Q9ULD9 1512 aaPredicted RBP31.62■■■□□ 2.65
ERCC2-205ENST00000485403 WDR97A6NE52 1622 aa31.57■■■□□ 2.64
ERCC2-205ENST00000485403 EIF4G3O43432 1585 aaKnown RBP31.54■■■□□ 2.64
ERCC2-205ENST00000485403 ABCA10Q8WWZ4 1543 aa31.53■■■□□ 2.64
ERCC2-205ENST00000485403 AQRO60306 1485 aaKnown RBP eCLIP31.47■■■□□ 2.632e-8■■■■■ 44.4
ERCC2-205ENST00000485403 TDRD9Q8NDG6 1382 aaKnown RBP31.44■■■□□ 2.62
ERCC2-205ENST00000485403 ABCA5Q8WWZ7 1642 aa31.39■■■□□ 2.62
ERCC2-205ENST00000485403 GAPVD1Q14C86 1478 aa31.33■■■□□ 2.61
ERCC2-205ENST00000485403 GRIN2BQ13224 1484 aa31.29■■■□□ 2.6
ERCC2-205ENST00000485403 PBRM1Q86U86 1689 aa31.28■■■□□ 2.6
ERCC2-205ENST00000485403 CHIC1Q5VXU3 224 aa31.26■■■□□ 2.59
ERCC2-205ENST00000485403 TRIM41Q8WV44 630 aa31.24■■■□□ 2.59
ERCC2-205ENST00000485403 SNAPC4Q5SXM2 1469 aa31.19■■■□□ 2.58
ERCC2-205ENST00000485403 MAGI1Q96QZ7 1491 aaPredicted RBP31.19■■■□□ 2.58
ERCC2-205ENST00000485403 KIF27Q86VH2 1401 aa31.16■■■□□ 2.58
ERCC2-205ENST00000485403 ERICH3Q5RHP9 1530 aa31.15■■■□□ 2.58
ERCC2-205ENST00000485403 CHD1O14646 1710 aa31.09■■■□□ 2.57
ERCC2-205ENST00000485403 SYNJ2O15056 1496 aa31.06■■■□□ 2.56
ERCC2-205ENST00000485403 ADAMTS12P58397 1594 aa31.05■■■□□ 2.56
ERCC2-205ENST00000485403 IGF1RP08069 1367 aa31■■■□□ 2.55
ERCC2-205ENST00000485403 FHAD1B1AJZ9 1412 aa30.98■■■□□ 2.55
ERCC2-205ENST00000485403 OSCARQ8IYS5 282 aa30.98■■■□□ 2.55
ERCC2-205ENST00000485403 RUSC2Q8N2Y8 1516 aa30.97■■■□□ 2.55
ERCC2-205ENST00000485403 FBLN2P98095 1184 aa30.95■■■□□ 2.55
ERCC2-205ENST00000485403 CHMP7Q8WUX9 453 aaPredicted RBP30.95■■■□□ 2.55
ERCC2-205ENST00000485403 CUL7Q14999 1698 aa30.94■■■□□ 2.54
ERCC2-205ENST00000485403 DNAJC5Q9H3Z4 198 aa30.92■■■□□ 2.54
ERCC2-205ENST00000485403 GRIN2AQ12879 1464 aa30.9■■■□□ 2.54
ERCC2-205ENST00000485403 CARMIL1Q5VZK9 1371 aa30.81■■■□□ 2.52
ERCC2-205ENST00000485403 EEA1Q15075 1411 aa30.78■■■□□ 2.52
ERCC2-205ENST00000485403 NUP160Q12769 1436 aa30.77■■■□□ 2.52
ERCC2-205ENST00000485403 CLASP1Q7Z460 1538 aa30.76■■■□□ 2.52
ERCC2-205ENST00000485403 CEP170Q5SW79 1584 aa30.74■■■□□ 2.51
ERCC2-205ENST00000485403 PRXQ9BXM0 1461 aa30.67■■■□□ 2.5
ERCC2-205ENST00000485403 RAPGEF2Q9Y4G8 1499 aa30.67■■■□□ 2.5
ERCC2-205ENST00000485403 CSRNP3Q8WYN3 585 aa30.66■■■□□ 2.5
ERCC2-205ENST00000485403 FAM9AQ8IZU1 332 aaPredicted RBP30.55■■■□□ 2.48
ERCC2-205ENST00000485403 KIAA0586Q9BVV6 1533 aa30.53■■■□□ 2.48
ERCC2-205ENST00000485403 SHROOM2Q13796 1616 aa30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms