RNA–Protein interactions for RNA: ENST00000630330.2

RAPH1-213, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RAPH1, Length 4,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-213ENST00000630330 NISCHQ9Y2I1 1504 aa25.44■■□□□ 1.66
RAPH1-213ENST00000630330 SUPT5HO00267 1087 aaKnown RBP23.95■■□□□ 1.42
RAPH1-213ENST00000630330 SHROOM4Q9ULL8 1493 aa23.92■■□□□ 1.42
RAPH1-213ENST00000630330 DCAF8L2P0C7V8 631 aa23.57■■□□□ 1.36
RAPH1-213ENST00000630330 PCGF6Q9BYE7 350 aa23.23■■□□□ 1.31
RAPH1-213ENST00000630330 PPARGC1BQ86YN6 1023 aaKnown RBP22.9■■□□□ 1.26
RAPH1-213ENST00000630330 HRCP23327 699 aa22.85■■□□□ 1.25
RAPH1-213ENST00000630330 EHMT2Q96KQ7 1210 aa22.79■■□□□ 1.24
RAPH1-213ENST00000630330 CHIC1Q5VXU3 224 aa22.58■■□□□ 1.2
RAPH1-213ENST00000630330 LOC105371045A0A1W2PR82 267 aa22.53■■□□□ 1.2
RAPH1-213ENST00000630330 FAM9AQ8IZU1 332 aaPredicted RBP22.4■■□□□ 1.18
RAPH1-213ENST00000630330 MYO15BQ96JP2 1530 aa22.12■■□□□ 1.13
RAPH1-213ENST00000630330 TTBK1Q5TCY1 1321 aaPredicted RBP22.08■■□□□ 1.12
RAPH1-213ENST00000630330 TRIM26Q12899 539 aaPredicted RBP22.04■■□□□ 1.12
RAPH1-213ENST00000630330 TRIM41Q8WV44 630 aa21.89■■□□□ 1.09
RAPH1-213ENST00000630330 ZEB1P37275 1124 aaPredicted RBP21.77■■□□□ 1.08
RAPH1-213ENST00000630330 CCER1Q8TC90 406 aaPredicted RBP21.72■■□□□ 1.07
RAPH1-213ENST00000630330 PELP1Q8IZL8 1130 aaKnown RBP21.7■■□□□ 1.06
RAPH1-213ENST00000630330 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.61■■□□□ 1.05
RAPH1-213ENST00000630330 YTHDC1Q96MU7 727 aaKnown RBP21.57■■□□□ 1.04
RAPH1-213ENST00000630330 SCAF1Q9H7N4 1312 aaKnown RBP21.54■■□□□ 1.04
RAPH1-213ENST00000630330 CENPBP07199 599 aaPredicted RBP21.42■■□□□ 1.02
RAPH1-213ENST00000630330 ZCCHC6Q5VYS8 1495 aaKnown RBP21.39■■□□□ 1.01
RAPH1-213ENST00000630330 DCAF1Q9Y4B6 1507 aa21.39■■□□□ 1.01
RAPH1-213ENST00000630330 GTF3C3Q9Y5Q9 886 aa21.34■■□□□ 1.01
RAPH1-213ENST00000630330 RANGAP1P46060 587 aaPredicted RBP21.27■■□□□ 1
RAPH1-213ENST00000630330 DIEXFQ68CQ4 756 aaKnown RBP21.27■■□□□ 1
RAPH1-213ENST00000630330 NEUROD1Q13562 356 aa21.24■□□□□ 0.99
RAPH1-213ENST00000630330 ACIN1Q9UKV3 1341 aaKnown RBP21.19■□□□□ 0.98
RAPH1-213ENST00000630330 UBTFP17480 764 aaKnown RBP21.12■□□□□ 0.97
RAPH1-213ENST00000630330 HNRNPUL2Q1KMD3 747 aaKnown RBP21.03■□□□□ 0.96
RAPH1-213ENST00000630330 APLP2Q06481 763 aa20.91■□□□□ 0.94
RAPH1-213ENST00000630330 CCDC180Q9P1Z9 1646 aa20.88■□□□□ 0.93
RAPH1-213ENST00000630330 MYT1Q01538 1121 aa20.74■□□□□ 0.91
RAPH1-213ENST00000630330 ZNF316A6NFI3 1004 aaPredicted RBP20.74■□□□□ 0.91
RAPH1-213ENST00000630330 RSF1Q96T23 1441 aaPredicted RBP20.65■□□□□ 0.9
RAPH1-213ENST00000630330 MIER1Q8N108 512 aa20.64■□□□□ 0.89
RAPH1-213ENST00000630330 ITGAEP38570 1179 aa20.61■□□□□ 0.89
RAPH1-213ENST00000630330 SCRIBQ14160 1630 aa20.6■□□□□ 0.89
RAPH1-213ENST00000630330 BCANQ96GW7 911 aa20.53■□□□□ 0.88
RAPH1-213ENST00000630330 ABCC9O60706 1549 aa20.41■□□□□ 0.86
RAPH1-213ENST00000630330 RB1CC1Q8TDY2 1594 aa20.41■□□□□ 0.86
RAPH1-213ENST00000630330 CSRNP3Q8WYN3 585 aa20.39■□□□□ 0.85
RAPH1-213ENST00000630330 ATP1B4Q9UN42 357 aaPredicted RBP20.35■□□□□ 0.85
RAPH1-213ENST00000630330 CECR2Q9BXF3 1484 aa20.29■□□□□ 0.84
RAPH1-213ENST00000630330 CEP162Q5TB80 1403 aa20.23■□□□□ 0.83
RAPH1-213ENST00000630330 PABPN1Q86U42 306 aaKnown RBP eCLIP20.23■□□□□ 0.83
RAPH1-213ENST00000630330 NEFLP07196 543 aa20.21■□□□□ 0.83
RAPH1-213ENST00000630330 SOGA1O94964 1423 aa20.11■□□□□ 0.81
RAPH1-213ENST00000630330 ERICH6Q7L0X2 663 aa20.11■□□□□ 0.81
RAPH1-213ENST00000630330 FKBP8Q14318 412 aa20.06■□□□□ 0.8
RAPH1-213ENST00000630330 HIRIP3Q9BW71 556 aaPredicted RBP20.05■□□□□ 0.8
RAPH1-213ENST00000630330 SUPT16HQ9Y5B9 1047 aaKnown RBP20.05■□□□□ 0.8
RAPH1-213ENST00000630330 MROH2BQ7Z745 1585 aa20.04■□□□□ 0.8
RAPH1-213ENST00000630330 CNGB1Q14028 1251 aaPredicted RBP20.03■□□□□ 0.8
RAPH1-213ENST00000630330 CCDC88BA6NC98 1476 aa20.02■□□□□ 0.8
RAPH1-213ENST00000630330 ABCC8Q09428 1581 aa20.01■□□□□ 0.79
RAPH1-213ENST00000630330 DDX10Q13206 875 aaKnown RBP20■□□□□ 0.79
RAPH1-213ENST00000630330 TRIM52Q96A61 297 aa19.98■□□□□ 0.79
RAPH1-213ENST00000630330 FAM50AQ14320 339 aaKnown RBP19.95■□□□□ 0.79
RAPH1-213ENST00000630330 TNIKQ9UKE5 1360 aa19.94■□□□□ 0.78
RAPH1-213ENST00000630330 KCNH8Q96L42 1107 aa19.91■□□□□ 0.78
RAPH1-213ENST00000630330 CLIP1P30622 1438 aa19.89■□□□□ 0.78
RAPH1-213ENST00000630330 RUSC2Q8N2Y8 1516 aa19.89■□□□□ 0.77
RAPH1-213ENST00000630330 WIZO95785 1651 aa19.87■□□□□ 0.77
RAPH1-213ENST00000630330 IRX6P78412 446 aaPredicted RBP19.83■□□□□ 0.77
RAPH1-213ENST00000630330 TSHZ2Q9NRE2 1034 aa19.83■□□□□ 0.76
RAPH1-213ENST00000630330 P3H3Q8IVL6 736 aa19.83■□□□□ 0.76
RAPH1-213ENST00000630330 ANP32EQ9BTT0 268 aa19.82■□□□□ 0.76
RAPH1-213ENST00000630330 GOLGA3Q08378 1498 aa19.77■□□□□ 0.76
RAPH1-213ENST00000630330 ANP32CO43423 234 aa19.75■□□□□ 0.75
RAPH1-213ENST00000630330 KANK4Q5T7N3 995 aaPredicted RBP19.73■□□□□ 0.75
RAPH1-213ENST00000630330 POLR3GLQ9BT43 218 aa19.72■□□□□ 0.75
RAPH1-213ENST00000630330 SIN3AQ96ST3 1273 aa19.71■□□□□ 0.75
RAPH1-213ENST00000630330 WRNQ14191 1432 aaPredicted RBP eCLIP19.69■□□□□ 0.74
RAPH1-213ENST00000630330 BCL11AQ9H165 835 aa19.66■□□□□ 0.74
RAPH1-213ENST00000630330 CLSPNQ9HAW4 1339 aa19.65■□□□□ 0.74
RAPH1-213ENST00000630330 HNRNPUQ00839 825 aaKnown RBP eCLIP19.63■□□□□ 0.73
RAPH1-213ENST00000630330 CDK11AQ9UQ88 783 aaPredicted RBP19.6■□□□□ 0.73
RAPH1-213ENST00000630330 SENP3-EIF4A1A0A087X0R7 540 aa19.59■□□□□ 0.73
RAPH1-213ENST00000630330 EEA1Q15075 1411 aa19.59■□□□□ 0.73
RAPH1-213ENST00000630330 RBM19Q9Y4C8 960 aaKnown RBP19.57■□□□□ 0.72
RAPH1-213ENST00000630330 CEP164Q9UPV0 1460 aa19.54■□□□□ 0.72
RAPH1-213ENST00000630330 VPS8Q8N3P4 1428 aa19.54■□□□□ 0.72
RAPH1-213ENST00000630330 BAZ1AQ9NRL2 1556 aaPredicted RBP19.52■□□□□ 0.72
RAPH1-213ENST00000630330 DHX57Q6P158 1386 aaKnown RBP19.51■□□□□ 0.71
RAPH1-213ENST00000630330 FAM9BQ8IZU0 186 aa19.48■□□□□ 0.71
RAPH1-213ENST00000630330 NBR1Q14596 966 aa19.46■□□□□ 0.71
RAPH1-213ENST00000630330 RAPGEF2Q9Y4G8 1499 aa19.45■□□□□ 0.7
RAPH1-213ENST00000630330 ARID3CA6NKF2 412 aa19.45■□□□□ 0.7
RAPH1-213ENST00000630330 NACADO15069 1562 aa19.42■□□□□ 0.7
RAPH1-213ENST00000630330 TONSLQ96HA7 1378 aa19.39■□□□□ 0.69
RAPH1-213ENST00000630330 CCNB3Q8WWL7 1395 aa19.37■□□□□ 0.69
RAPH1-213ENST00000630330 ZNF326Q5BKZ1 582 aaKnown RBP19.36■□□□□ 0.69
RAPH1-213ENST00000630330 CHIC2Q9UKJ5 165 aa19.35■□□□□ 0.69
RAPH1-213ENST00000630330 RAB3GAP2Q9H2M9 1393 aa19.33■□□□□ 0.69
RAPH1-213ENST00000630330 TOP2AP11388 1531 aaKnown RBP19.31■□□□□ 0.68
RAPH1-213ENST00000630330 B4GALNT3Q6L9W6 998 aa19.3■□□□□ 0.68
RAPH1-213ENST00000630330 NPM2Q86SE8 214 aaKnown RBP19.28■□□□□ 0.68
RAPH1-213ENST00000630330 RTL5Q5HYW3 569 aaPredicted RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms