RNA–Protein interactions for RNA: ENST00000255152.2

ZSWIM3-201, Transcript of zinc finger SWIM-type containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZSWIM3, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3-201ENST00000255152 NISCHQ9Y2I1 1504 aa26.46■■□□□ 1.83
ZSWIM3-201ENST00000255152 CCDC180Q9P1Z9 1646 aa22.99■■□□□ 1.27
ZSWIM3-201ENST00000255152 DCAF8L2P0C7V8 631 aa22.38■■□□□ 1.17
ZSWIM3-201ENST00000255152 ABCC9O60706 1549 aa22.29■■□□□ 1.16
ZSWIM3-201ENST00000255152 PELP1Q8IZL8 1130 aaKnown RBP22.19■■□□□ 1.14
ZSWIM3-201ENST00000255152 ZCCHC6Q5VYS8 1495 aaKnown RBP22.15■■□□□ 1.14
ZSWIM3-201ENST00000255152 HRCP23327 699 aa22.09■■□□□ 1.13
ZSWIM3-201ENST00000255152 SHROOM4Q9ULL8 1493 aa21.84■■□□□ 1.09
ZSWIM3-201ENST00000255152 DCAF1Q9Y4B6 1507 aa21.69■■□□□ 1.06
ZSWIM3-201ENST00000255152 MYT1Q01538 1121 aa21.53■■□□□ 1.04
ZSWIM3-201ENST00000255152 NACADO15069 1562 aa21.53■■□□□ 1.04
ZSWIM3-201ENST00000255152 PPARGC1BQ86YN6 1023 aaKnown RBP21.48■■□□□ 1.03
ZSWIM3-201ENST00000255152 MYO15BQ96JP2 1530 aa21.47■■□□□ 1.03
ZSWIM3-201ENST00000255152 RB1CC1Q8TDY2 1594 aa21.44■■□□□ 1.02
ZSWIM3-201ENST00000255152 SCRIBQ14160 1630 aa21.4■■□□□ 1.02
ZSWIM3-201ENST00000255152 PCGF6Q9BYE7 350 aa21.31■■□□□ 1
ZSWIM3-201ENST00000255152 SCAF1Q9H7N4 1312 aaKnown RBP21.12■□□□□ 0.97
ZSWIM3-201ENST00000255152 PABPN1Q86U42 306 aaKnown RBP eCLIP21.1■□□□□ 0.97
ZSWIM3-201ENST00000255152 UNC13AQ9UPW8 1703 aa21.02■□□□□ 0.96
ZSWIM3-201ENST00000255152 SUPT5HO00267 1087 aaKnown RBP20.92■□□□□ 0.94
ZSWIM3-201ENST00000255152 BICRAQ9NZM4 1560 aa20.84■□□□□ 0.93
ZSWIM3-201ENST00000255152 CECR2Q9BXF3 1484 aa20.72■□□□□ 0.91
ZSWIM3-201ENST00000255152 CHIC1Q5VXU3 224 aa20.69■□□□□ 0.9
ZSWIM3-201ENST00000255152 ZEB1P37275 1124 aaPredicted RBP20.66■□□□□ 0.9
ZSWIM3-201ENST00000255152 TRIM26Q12899 539 aaPredicted RBP20.58■□□□□ 0.89
ZSWIM3-201ENST00000255152 RSF1Q96T23 1441 aaPredicted RBP20.53■□□□□ 0.88
ZSWIM3-201ENST00000255152 MROH2BQ7Z745 1585 aa20.52■□□□□ 0.88
ZSWIM3-201ENST00000255152 ACIN1Q9UKV3 1341 aaKnown RBP20.51■□□□□ 0.87
ZSWIM3-201ENST00000255152 BAZ1AQ9NRL2 1556 aaPredicted RBP20.42■□□□□ 0.86
ZSWIM3-201ENST00000255152 SMARCA4P51532 1647 aa20.37■□□□□ 0.85
ZSWIM3-201ENST00000255152 NEUROD1Q13562 356 aa20.37■□□□□ 0.85
ZSWIM3-201ENST00000255152 TTBK1Q5TCY1 1321 aaPredicted RBP20.36■□□□□ 0.85
ZSWIM3-201ENST00000255152 WIZO95785 1651 aa20.35■□□□□ 0.85
ZSWIM3-201ENST00000255152 GTF3C3Q9Y5Q9 886 aa20.32■□□□□ 0.84
ZSWIM3-201ENST00000255152 EIF4G1Q04637 1599 aaKnown RBP20.24■□□□□ 0.83
ZSWIM3-201ENST00000255152 CENPBP07199 599 aaPredicted RBP20.21■□□□□ 0.83
ZSWIM3-201ENST00000255152 LOC105371045A0A1W2PR82 267 aa20.2■□□□□ 0.82
ZSWIM3-201ENST00000255152 ATAD2BQ9ULI0 1458 aa20.13■□□□□ 0.81
ZSWIM3-201ENST00000255152 CC2D2AQ9P2K1 1620 aa20.03■□□□□ 0.8
ZSWIM3-201ENST00000255152 SMARCA2P51531 1590 aa20.03■□□□□ 0.8
ZSWIM3-201ENST00000255152 BAZ1BQ9UIG0 1483 aaKnown RBP20.03■□□□□ 0.8
ZSWIM3-201ENST00000255152 TOP2AP11388 1531 aaKnown RBP20.01■□□□□ 0.79
ZSWIM3-201ENST00000255152 PEG3Q9GZU2 1588 aa20.01■□□□□ 0.79
ZSWIM3-201ENST00000255152 DNAJC5BQ9UF47 199 aa19.93■□□□□ 0.78
ZSWIM3-201ENST00000255152 NCAPD3P42695 1498 aa19.93■□□□□ 0.78
ZSWIM3-201ENST00000255152 CCDC88BA6NC98 1476 aa19.92■□□□□ 0.78
ZSWIM3-201ENST00000255152 BCL11AQ9H165 835 aa19.9■□□□□ 0.78
ZSWIM3-201ENST00000255152 DIEXFQ68CQ4 756 aaKnown RBP19.87■□□□□ 0.77
ZSWIM3-201ENST00000255152 HMGXB3Q12766 1538 aa19.82■□□□□ 0.76
ZSWIM3-201ENST00000255152 FAM9AQ8IZU1 332 aaPredicted RBP19.71■□□□□ 0.75
ZSWIM3-201ENST00000255152 ANP32EQ9BTT0 268 aa19.63■□□□□ 0.73
ZSWIM3-201ENST00000255152 CCER1Q8TC90 406 aaPredicted RBP19.59■□□□□ 0.73
ZSWIM3-201ENST00000255152 TRIM41Q8WV44 630 aa19.56■□□□□ 0.72
ZSWIM3-201ENST00000255152 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.55■□□□□ 0.72
ZSWIM3-201ENST00000255152 ABCC8Q09428 1581 aa19.52■□□□□ 0.72
ZSWIM3-201ENST00000255152 YTHDC1Q96MU7 727 aaKnown RBP19.5■□□□□ 0.71
ZSWIM3-201ENST00000255152 NESP48681 1621 aa19.5■□□□□ 0.71
ZSWIM3-201ENST00000255152 CADPSQ9ULU8 1353 aa19.49■□□□□ 0.71
ZSWIM3-201ENST00000255152 CFTRP13569 1480 aa19.46■□□□□ 0.71
ZSWIM3-201ENST00000255152 PRKCSHP14314 528 aaPredicted RBP19.45■□□□□ 0.7
ZSWIM3-201ENST00000255152 ZNF316A6NFI3 1004 aaPredicted RBP19.38■□□□□ 0.69
ZSWIM3-201ENST00000255152 CSRNP3Q8WYN3 585 aa19.37■□□□□ 0.69
ZSWIM3-201ENST00000255152 CLSPNQ9HAW4 1339 aa19.34■□□□□ 0.69
ZSWIM3-201ENST00000255152 WRNQ14191 1432 aaPredicted RBP eCLIP19.34■□□□□ 0.69
ZSWIM3-201ENST00000255152 TSHZ2Q9NRE2 1034 aa19.3■□□□□ 0.68
ZSWIM3-201ENST00000255152 FANCD2Q9BXW9 1451 aa19.29■□□□□ 0.68
ZSWIM3-201ENST00000255152 EHMT2Q96KQ7 1210 aa19.28■□□□□ 0.68
ZSWIM3-201ENST00000255152 MIER1Q8N108 512 aa19.27■□□□□ 0.68
ZSWIM3-201ENST00000255152 SYNJ1O43426 1573 aa19.25■□□□□ 0.67
ZSWIM3-201ENST00000255152 LAMC3Q9Y6N6 1575 aa19.25■□□□□ 0.67
ZSWIM3-201ENST00000255152 SUPT16HQ9Y5B9 1047 aaKnown RBP19.24■□□□□ 0.67
ZSWIM3-201ENST00000255152 PRDM2Q13029 1718 aa19.2■□□□□ 0.66
ZSWIM3-201ENST00000255152 PDS5BQ9NTI5 1447 aa19.19■□□□□ 0.66
ZSWIM3-201ENST00000255152 CUX1P39880 1505 aa19.18■□□□□ 0.66
ZSWIM3-201ENST00000255152 SLC24A1O60721 1099 aa19.16■□□□□ 0.66
ZSWIM3-201ENST00000255152 ERICH6Q7L0X2 663 aa19.16■□□□□ 0.66
ZSWIM3-201ENST00000255152 CEP164Q9UPV0 1460 aa19.16■□□□□ 0.66
ZSWIM3-201ENST00000255152 KIF21AQ7Z4S6 1674 aa19.13■□□□□ 0.65
ZSWIM3-201ENST00000255152 SOGA1O94964 1423 aa19.13■□□□□ 0.65
ZSWIM3-201ENST00000255152 TOP2BQ02880 1626 aa19.1■□□□□ 0.65
ZSWIM3-201ENST00000255152 RUSC2Q8N2Y8 1516 aa19.1■□□□□ 0.65
ZSWIM3-201ENST00000255152 ERCC6Q03468 1493 aa19.09■□□□□ 0.65
ZSWIM3-201ENST00000255152 URB2Q14146 1524 aaKnown RBP19.05■□□□□ 0.64
ZSWIM3-201ENST00000255152 BIVM-ERCC5R4GMW8 1640 aa19.03■□□□□ 0.64
ZSWIM3-201ENST00000255152 TOPBP1Q92547 1522 aa19.03■□□□□ 0.64
ZSWIM3-201ENST00000255152 FGD5Q6ZNL6 1462 aa19.02■□□□□ 0.64
ZSWIM3-201ENST00000255152 DNMBPQ6XZF7 1577 aa18.98■□□□□ 0.63
ZSWIM3-201ENST00000255152 RAD54L2Q9Y4B4 1467 aa18.98■□□□□ 0.63
ZSWIM3-201ENST00000255152 POLA1P09884 1462 aaPredicted RBP18.94■□□□□ 0.62
ZSWIM3-201ENST00000255152 MRC2Q9UBG0 1479 aa18.94■□□□□ 0.62
ZSWIM3-201ENST00000255152 CUX2O14529 1486 aa18.9■□□□□ 0.62
ZSWIM3-201ENST00000255152 APLP2Q06481 763 aa18.89■□□□□ 0.62
ZSWIM3-201ENST00000255152 TDRD9Q8NDG6 1382 aaKnown RBP18.86■□□□□ 0.61
ZSWIM3-201ENST00000255152 KIF27Q86VH2 1401 aa18.84■□□□□ 0.61
ZSWIM3-201ENST00000255152 UBTFP17480 764 aaKnown RBP18.81■□□□□ 0.6
ZSWIM3-201ENST00000255152 EEA1Q15075 1411 aa18.81■□□□□ 0.6
ZSWIM3-201ENST00000255152 RBM19Q9Y4C8 960 aaKnown RBP18.8■□□□□ 0.6
ZSWIM3-201ENST00000255152 THOC2Q8NI27 1593 aaKnown RBP18.8■□□□□ 0.6
ZSWIM3-201ENST00000255152 WDR62O43379 1518 aa18.79■□□□□ 0.6
ZSWIM3-201ENST00000255152 RANGAP1P46060 587 aaPredicted RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms