RNA–Protein interactions for RNA: ENST00000354744.8

SEMA6D-202, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-202ENST00000354744 DCAF8L2P0C7V8 631 aa21.27■□□□□ 0.99
SEMA6D-202ENST00000354744 PELP1Q8IZL8 1130 aaKnown RBP20.64■□□□□ 0.89
SEMA6D-202ENST00000354744 SUPT5HO00267 1087 aaKnown RBP20.09■□□□□ 0.81
SEMA6D-202ENST00000354744 APLP2Q06481 763 aa19.88■□□□□ 0.77
SEMA6D-202ENST00000354744 FAM9AQ8IZU1 332 aaPredicted RBP19.83■□□□□ 0.76
SEMA6D-202ENST00000354744 ERICH6Q7L0X2 663 aa19.74■□□□□ 0.75
SEMA6D-202ENST00000354744 CCER1Q8TC90 406 aaPredicted RBP19.7■□□□□ 0.74
SEMA6D-202ENST00000354744 EHMT2Q96KQ7 1210 aa19.67■□□□□ 0.74
SEMA6D-202ENST00000354744 SHROOM4Q9ULL8 1493 aa19.49■□□□□ 0.71
SEMA6D-202ENST00000354744 CENPBP07199 599 aaPredicted RBP19.38■□□□□ 0.69
SEMA6D-202ENST00000354744 ZEB1P37275 1124 aaPredicted RBP19.19■□□□□ 0.66
SEMA6D-202ENST00000354744 MYT1Q01538 1121 aa19.17■□□□□ 0.66
SEMA6D-202ENST00000354744 NISCHQ9Y2I1 1504 aa19.15■□□□□ 0.66
SEMA6D-202ENST00000354744 NEFLP07196 543 aa19.13■□□□□ 0.65
SEMA6D-202ENST00000354744 TTBK1Q5TCY1 1321 aaPredicted RBP19.09■□□□□ 0.65
SEMA6D-202ENST00000354744 PCGF6Q9BYE7 350 aa19.06■□□□□ 0.64
SEMA6D-202ENST00000354744 ATP1B4Q9UN42 357 aaPredicted RBP18.95■□□□□ 0.62
SEMA6D-202ENST00000354744 RANGAP1P46060 587 aaPredicted RBP18.87■□□□□ 0.61
SEMA6D-202ENST00000354744 DAXXQ9UER7 740 aaPredicted RBP18.83■□□□□ 0.6
SEMA6D-202ENST00000354744 YTHDC1Q96MU7 727 aaKnown RBP18.72■□□□□ 0.59
SEMA6D-202ENST00000354744 TRIM41Q8WV44 630 aa18.71■□□□□ 0.59
SEMA6D-202ENST00000354744 UBTFP17480 764 aaKnown RBP18.66■□□□□ 0.58
SEMA6D-202ENST00000354744 MYT1LQ9UL68 1186 aa18.46■□□□□ 0.55
SEMA6D-202ENST00000354744 POLR3GLQ9BT43 218 aa18.35■□□□□ 0.53
SEMA6D-202ENST00000354744 ZNF316A6NFI3 1004 aaPredicted RBP18.33■□□□□ 0.53
SEMA6D-202ENST00000354744 RTL5Q5HYW3 569 aaPredicted RBP18.27■□□□□ 0.52
SEMA6D-202ENST00000354744 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.24■□□□□ 0.51
SEMA6D-202ENST00000354744 HNRNPUL2Q1KMD3 747 aaKnown RBP18.24■□□□□ 0.51
SEMA6D-202ENST00000354744 TRIM26Q12899 539 aaPredicted RBP18.19■□□□□ 0.5
SEMA6D-202ENST00000354744 CLSPNQ9HAW4 1339 aa18.18■□□□□ 0.5
SEMA6D-202ENST00000354744 SLC4A1APQ9BWU0 796 aaKnown RBP18.17■□□□□ 0.5
SEMA6D-202ENST00000354744 ITGAEP38570 1179 aa18.11■□□□□ 0.49
SEMA6D-202ENST00000354744 PPARGC1BQ86YN6 1023 aaKnown RBP18.07■□□□□ 0.48
SEMA6D-202ENST00000354744 CHIC1Q5VXU3 224 aa17.99■□□□□ 0.47
SEMA6D-202ENST00000354744 CNGB1Q14028 1251 aaPredicted RBP17.99■□□□□ 0.47
SEMA6D-202ENST00000354744 HRCP23327 699 aa17.98■□□□□ 0.47
SEMA6D-202ENST00000354744 ZBTB47Q9UFB7 747 aaPredicted RBP17.97■□□□□ 0.47
SEMA6D-202ENST00000354744 TRIM52Q96A61 297 aa17.73■□□□□ 0.43
SEMA6D-202ENST00000354744 CDK11AQ9UQ88 783 aaPredicted RBP17.73■□□□□ 0.43
SEMA6D-202ENST00000354744 DIEXFQ68CQ4 756 aaKnown RBP17.7■□□□□ 0.42
SEMA6D-202ENST00000354744 CANXP27824 592 aaKnown RBP17.69■□□□□ 0.42
SEMA6D-202ENST00000354744 FAM50AQ14320 339 aaKnown RBP17.68■□□□□ 0.42
SEMA6D-202ENST00000354744 NEFMP07197 916 aa17.66■□□□□ 0.42
SEMA6D-202ENST00000354744 ANP32CO43423 234 aa17.64■□□□□ 0.41
SEMA6D-202ENST00000354744 SLC24A1O60721 1099 aa17.61■□□□□ 0.41
SEMA6D-202ENST00000354744 NEUROD1Q13562 356 aa17.54■□□□□ 0.4
SEMA6D-202ENST00000354744 ANP32BQ92688 251 aaKnown RBP17.53■□□□□ 0.4
SEMA6D-202ENST00000354744 BCANQ96GW7 911 aa17.51■□□□□ 0.39
SEMA6D-202ENST00000354744 ANP32AP39687 249 aaKnown RBP17.5■□□□□ 0.39
SEMA6D-202ENST00000354744 ZNF326Q5BKZ1 582 aaKnown RBP17.48■□□□□ 0.39
SEMA6D-202ENST00000354744 LOC105371045A0A1W2PR82 267 aa17.46■□□□□ 0.39
SEMA6D-202ENST00000354744 BCL11AQ9H165 835 aa17.43■□□□□ 0.38
SEMA6D-202ENST00000354744 GTF3C3Q9Y5Q9 886 aa17.34■□□□□ 0.37
SEMA6D-202ENST00000354744 GLIPR1L2Q4G1C9 344 aa17.33■□□□□ 0.36
SEMA6D-202ENST00000354744 HSP90AA1P07900 732 aaKnown RBP17.32■□□□□ 0.36
SEMA6D-202ENST00000354744 UPF2Q9HAU5 1272 aaKnown RBP17.3■□□□□ 0.36
SEMA6D-202ENST00000354744 NPM2Q86SE8 214 aaKnown RBP17.26■□□□□ 0.35
SEMA6D-202ENST00000354744 ESF1Q9H501 851 aaKnown RBP17.2■□□□□ 0.34
SEMA6D-202ENST00000354744 CDK11BP21127 795 aaKnown RBP17.19■□□□□ 0.34
SEMA6D-202ENST00000354744 EIF5BO60841 1220 aaKnown RBP17.19■□□□□ 0.34
SEMA6D-202ENST00000354744 FBLN2P98095 1184 aa17.18■□□□□ 0.34
SEMA6D-202ENST00000354744 STAG3Q9UJ98 1225 aa17.09■□□□□ 0.33
SEMA6D-202ENST00000354744 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.08■□□□□ 0.33
SEMA6D-202ENST00000354744 ZNF777Q9ULD5 760 aaPredicted RBP17.03■□□□□ 0.32
SEMA6D-202ENST00000354744 ACIN1Q9UKV3 1341 aaKnown RBP17.02■□□□□ 0.32
SEMA6D-202ENST00000354744 CHGAP10645 457 aaKnown RBP16.98■□□□□ 0.31
SEMA6D-202ENST00000354744 FKBP8Q14318 412 aa16.97■□□□□ 0.31
SEMA6D-202ENST00000354744 MYH16Q9H6N6 1097 aa16.97■□□□□ 0.31
SEMA6D-202ENST00000354744 TONSLQ96HA7 1378 aa16.96■□□□□ 0.31
SEMA6D-202ENST00000354744 NCLP19338 710 aaKnown RBP16.92■□□□□ 0.3
SEMA6D-202ENST00000354744 WDR43Q15061 677 aaKnown RBP eCLIP16.92■□□□□ 0.3
SEMA6D-202ENST00000354744 ARID3CA6NKF2 412 aa16.9■□□□□ 0.3
SEMA6D-202ENST00000354744 PABPN1Q86U42 306 aaKnown RBP eCLIP16.9■□□□□ 0.3
SEMA6D-202ENST00000354744 P3H3Q8IVL6 736 aa16.89■□□□□ 0.3
SEMA6D-202ENST00000354744 HNRNPUQ00839 825 aaKnown RBP eCLIP16.89■□□□□ 0.29
SEMA6D-202ENST00000354744 CCDC136Q96JN2 1154 aa16.88■□□□□ 0.29
SEMA6D-202ENST00000354744 NPM1P06748 294 aaKnown RBP eCLIP16.87■□□□□ 0.29
SEMA6D-202ENST00000354744 ANP32EQ9BTT0 268 aa16.86■□□□□ 0.29
SEMA6D-202ENST00000354744 FAM9BQ8IZU0 186 aa16.86■□□□□ 0.29
SEMA6D-202ENST00000354744 DDRGK1Q96HY6 314 aa16.85■□□□□ 0.29
SEMA6D-202ENST00000354744 BECN1Q14457 450 aa16.83■□□□□ 0.29
SEMA6D-202ENST00000354744 TMC1Q8TDI8 760 aa16.83■□□□□ 0.28
SEMA6D-202ENST00000354744 TNNT2P45379 298 aaPredicted RBP16.81■□□□□ 0.28
SEMA6D-202ENST00000354744 GOLGA6L22H0YM25 854 aa16.8■□□□□ 0.28
SEMA6D-202ENST00000354744 PLPPR3Q6T4P5 718 aa16.8■□□□□ 0.28
SEMA6D-202ENST00000354744 NBR1Q14596 966 aa16.8■□□□□ 0.28
SEMA6D-202ENST00000354744 TRIM44Q96DX7 344 aaPredicted RBP16.8■□□□□ 0.28
SEMA6D-202ENST00000354744 ARXQ96QS3 562 aa16.79■□□□□ 0.28
SEMA6D-202ENST00000354744 SCAF1Q9H7N4 1312 aaKnown RBP16.78■□□□□ 0.28
SEMA6D-202ENST00000354744 ZRSR1Q15695 479 aaKnown RBP16.77■□□□□ 0.28
SEMA6D-202ENST00000354744 CSRNP3Q8WYN3 585 aa16.75■□□□□ 0.27
SEMA6D-202ENST00000354744 SALL2Q9Y467 1007 aaPredicted RBP16.75■□□□□ 0.27
SEMA6D-202ENST00000354744 ABCC9O60706 1549 aa16.74■□□□□ 0.27
SEMA6D-202ENST00000354744 CASC1Q6TDU7 716 aa16.74■□□□□ 0.27
SEMA6D-202ENST00000354744 A0A0G2JS52 829 aa16.71■□□□□ 0.27
SEMA6D-202ENST00000354744 DDX10Q13206 875 aaKnown RBP16.69■□□□□ 0.26
SEMA6D-202ENST00000354744 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.68■□□□□ 0.26
SEMA6D-202ENST00000354744 PTMAP06454 111 aaKnown RBP16.68■□□□□ 0.26
SEMA6D-202ENST00000354744 MRS2Q9HD23 443 aa16.66■□□□□ 0.26
SEMA6D-202ENST00000354744 GOLGA6L6A8MZA4 724 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms