Protein–RNA interactions for Protein: Q8IYB3

SRRM1, Serine/arginine repetitive matrix protein 1, humanhuman

Known RBP Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1Q8IYB3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
SRRM1Q8IYB3 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SRRM1Q8IYB3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.08■□□□□ 0.32
SRRM1Q8IYB3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SRRM1Q8IYB3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRRM1Q8IYB3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRRM1Q8IYB3 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SRRM1Q8IYB3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.08■□□□□ 0.32
SRRM1Q8IYB3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRRM1Q8IYB3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.08■□□□□ 0.32
SRRM1Q8IYB3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SRRM1Q8IYB3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SRRM1Q8IYB3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.08■□□□□ 0.32
SRRM1Q8IYB3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRRM1Q8IYB3 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.08■□□□□ 0.32
SRRM1Q8IYB3 AL138831.2-201ENST00000606564 490 ntBASIC17.08■□□□□ 0.32
SRRM1Q8IYB3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SRRM1Q8IYB3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.08■□□□□ 0.32
SRRM1Q8IYB3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRRM1Q8IYB3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SRRM1Q8IYB3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRRM1Q8IYB3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRRM1Q8IYB3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM1Q8IYB3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 AC005332.1-201ENST00000577698 1310 ntBASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 RN7SL510P-201ENST00000581311 263 ntBASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 AC005336.2-201ENST00000593183 939 ntBASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM1Q8IYB3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.05■□□□□ 0.32
SRRM1Q8IYB3 AC144831.1-201ENST00000573312 2656 ntBASIC17.05■□□□□ 0.32
SRRM1Q8IYB3 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SRRM1Q8IYB3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms