RNA–Protein interactions for RNA: ENST00000349553.9

CALB2-202, Transcript of calbindin 2, humanhuman

TSL 5 BASIC

Gene CALB2, Length 1,373 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALB2-202ENST00000349553 NISCHQ9Y2I1 1504 aa44.2■■■■■ 4.67
CALB2-202ENST00000349553 ABCC9O60706 1549 aa40.17■■■■■ 4.02
CALB2-202ENST00000349553 CCDC180Q9P1Z9 1646 aa39.7■■■■□ 3.95
CALB2-202ENST00000349553 RB1CC1Q8TDY2 1594 aa38.01■■■■□ 3.67
CALB2-202ENST00000349553 DNAJC5BQ9UF47 199 aa37.93■■■■□ 3.66
CALB2-202ENST00000349553 DCAF8L2P0C7V8 631 aa37.73■■■■□ 3.63
CALB2-202ENST00000349553 NACADO15069 1562 aa37.65■■■■□ 3.62
CALB2-202ENST00000349553 PABPN1Q86U42 306 aaKnown RBP eCLIP37.43■■■■□ 3.58
CALB2-202ENST00000349553 UNC13AQ9UPW8 1703 aa37.08■■■■□ 3.53
CALB2-202ENST00000349553 MYO15BQ96JP2 1530 aa36.96■■■■□ 3.51
CALB2-202ENST00000349553 BICRAQ9NZM4 1560 aa36.86■■■■□ 3.49
CALB2-202ENST00000349553 ZCCHC6Q5VYS8 1495 aaKnown RBP36.54■■■■□ 3.44
CALB2-202ENST00000349553 DCAF1Q9Y4B6 1507 aa36.4■■■■□ 3.42
CALB2-202ENST00000349553 SCRIBQ14160 1630 aa36.3■■■■□ 3.4
CALB2-202ENST00000349553 SHROOM4Q9ULL8 1493 aa36.28■■■■□ 3.4
CALB2-202ENST00000349553 CC2D2AQ9P2K1 1620 aa36.19■■■■□ 3.38
CALB2-202ENST00000349553 CECR2Q9BXF3 1484 aa36.18■■■■□ 3.38
CALB2-202ENST00000349553 EIF4G1Q04637 1599 aaKnown RBP36.02■■■■□ 3.36
CALB2-202ENST00000349553 DNAJC5Q9H3Z4 198 aa35.01■■■■□ 3.2
CALB2-202ENST00000349553 NCAPD3P42695 1498 aa34.77■■■■□ 3.16
CALB2-202ENST00000349553 ERCC6Q03468 1493 aa34.72■■■■□ 3.15
CALB2-202ENST00000349553 ATAD2BQ9ULI0 1458 aa34.66■■■■□ 3.14
CALB2-202ENST00000349553 CUX2O14529 1486 aa34.63■■■■□ 3.13
CALB2-202ENST00000349553 SMARCA2P51531 1590 aa34.53■■■■□ 3.12
CALB2-202ENST00000349553 SMARCA4P51532 1647 aa34.53■■■■□ 3.12
CALB2-202ENST00000349553 HMGXB3Q12766 1538 aa34.45■■■■□ 3.11
CALB2-202ENST00000349553 NESP48681 1621 aa34.39■■■■□ 3.1
CALB2-202ENST00000349553 BAZ1BQ9UIG0 1483 aaKnown RBP34.35■■■■□ 3.09
CALB2-202ENST00000349553 BAZ1AQ9NRL2 1556 aaPredicted RBP34.33■■■■□ 3.09
CALB2-202ENST00000349553 PEG3Q9GZU2 1588 aa34.12■■■■□ 3.05
CALB2-202ENST00000349553 MROH2BQ7Z745 1585 aa34.08■■■■□ 3.05
CALB2-202ENST00000349553 LAMC3Q9Y6N6 1575 aa34.02■■■■□ 3.04
CALB2-202ENST00000349553 THOC2Q8NI27 1593 aaKnown RBP34■■■■□ 3.03
CALB2-202ENST00000349553 PDS5BQ9NTI5 1447 aa33.92■■■■□ 3.02
CALB2-202ENST00000349553 KIF21AQ7Z4S6 1674 aa33.88■■■■□ 3.01
CALB2-202ENST00000349553 CADPSQ9ULU8 1353 aa33.77■■■■□ 3
CALB2-202ENST00000349553 WIZO95785 1651 aa33.66■■■□□ 2.98
CALB2-202ENST00000349553 MRC2Q9UBG0 1479 aa33.62■■■□□ 2.97
CALB2-202ENST00000349553 TRIM41Q8WV44 630 aa33.52■■■□□ 2.96
CALB2-202ENST00000349553 WDR62O43379 1518 aa33.48■■■□□ 2.95
CALB2-202ENST00000349553 CEP164Q9UPV0 1460 aa33.44■■■□□ 2.94
CALB2-202ENST00000349553 FANCD2Q9BXW9 1451 aa33.38■■■□□ 2.93
CALB2-202ENST00000349553 RSF1Q96T23 1441 aaPredicted RBP33.28■■■□□ 2.92
CALB2-202ENST00000349553 CFTRP13569 1480 aa33.27■■■□□ 2.92
CALB2-202ENST00000349553 TOP2AP11388 1531 aaKnown RBP33.19■■■□□ 2.9
CALB2-202ENST00000349553 OSCARQ8IYS5 282 aa33.13■■■□□ 2.89
CALB2-202ENST00000349553 URB2Q14146 1524 aaKnown RBP33.1■■■□□ 2.89
CALB2-202ENST00000349553 CCDC88BA6NC98 1476 aa32.87■■■□□ 2.85
CALB2-202ENST00000349553 PRDM2Q13029 1718 aa32.84■■■□□ 2.85
CALB2-202ENST00000349553 IFT140Q96RY7 1462 aa32.78■■■□□ 2.84
CALB2-202ENST00000349553 ZNF608Q9ULD9 1512 aaPredicted RBP32.77■■■□□ 2.84
CALB2-202ENST00000349553 TOPBP1Q92547 1522 aa32.7■■■□□ 2.83
CALB2-202ENST00000349553 RIMBP3CA6NJZ7 1639 aa32.63■■■□□ 2.81
CALB2-202ENST00000349553 RIMBP3BA6NNM3 1639 aa32.63■■■□□ 2.81
CALB2-202ENST00000349553 RIMBP3Q9UFD9 1639 aa32.63■■■□□ 2.81
CALB2-202ENST00000349553 ABCC8Q09428 1581 aa32.59■■■□□ 2.81
CALB2-202ENST00000349553 DNMBPQ6XZF7 1577 aa32.53■■■□□ 2.8
CALB2-202ENST00000349553 EIF4G3O43432 1585 aaKnown RBP32.53■■■□□ 2.8
CALB2-202ENST00000349553 ARHGEF11O15085 1522 aa32.51■■■□□ 2.79
CALB2-202ENST00000349553 AQRO60306 1485 aaKnown RBP eCLIP32.48■■■□□ 2.79
CALB2-202ENST00000349553 FBLN2P98095 1184 aa32.46■■■□□ 2.79
CALB2-202ENST00000349553 CYB5RLQ6IPT4 315 aa32.44■■■□□ 2.78
CALB2-202ENST00000349553 TARBP1Q13395 1621 aaKnown RBP32.38■■■□□ 2.77
CALB2-202ENST00000349553 POLA1P09884 1462 aaPredicted RBP32.35■■■□□ 2.77
CALB2-202ENST00000349553 CHD1O14646 1710 aa32.34■■■□□ 2.77
CALB2-202ENST00000349553 RAD54L2Q9Y4B4 1467 aa32.29■■■□□ 2.76
CALB2-202ENST00000349553 SOGA1O94964 1423 aa32.26■■■□□ 2.75
CALB2-202ENST00000349553 TDRD9Q8NDG6 1382 aaKnown RBP32.25■■■□□ 2.75
CALB2-202ENST00000349553 TRHP20396 242 aaPredicted RBP32.22■■■□□ 2.75
CALB2-202ENST00000349553 ARAP1Q96P48 1450 aa32.17■■■□□ 2.74
CALB2-202ENST00000349553 FGD5Q6ZNL6 1462 aa32.13■■■□□ 2.73
CALB2-202ENST00000349553 CHMP7Q8WUX9 453 aaPredicted RBP32.11■■■□□ 2.73
CALB2-202ENST00000349553 SNAPC4Q5SXM2 1469 aa32.11■■■□□ 2.73
CALB2-202ENST00000349553 CUX1P39880 1505 aa32.03■■■□□ 2.72
CALB2-202ENST00000349553 WDR97A6NE52 1622 aa31.98■■■□□ 2.71
CALB2-202ENST00000349553 GRIN2BQ13224 1484 aa31.97■■■□□ 2.71
CALB2-202ENST00000349553 MAGI1Q96QZ7 1491 aaPredicted RBP31.96■■■□□ 2.71
CALB2-202ENST00000349553 SYNJ1O43426 1573 aa31.94■■■□□ 2.7
CALB2-202ENST00000349553 CLASP1Q7Z460 1538 aa31.93■■■□□ 2.7
CALB2-202ENST00000349553 SYNJ2O15056 1496 aa31.88■■■□□ 2.69
CALB2-202ENST00000349553 GAPVD1Q14C86 1478 aa31.83■■■□□ 2.69
CALB2-202ENST00000349553 SUPT5HO00267 1087 aaKnown RBP31.82■■■□□ 2.69
CALB2-202ENST00000349553 PBRM1Q86U86 1689 aa31.76■■■□□ 2.68
CALB2-202ENST00000349553 ABCA10Q8WWZ4 1543 aa31.7■■■□□ 2.67
CALB2-202ENST00000349553 ABCA5Q8WWZ7 1642 aa31.65■■■□□ 2.66
CALB2-202ENST00000349553 WRNQ14191 1432 aaPredicted RBP eCLIP31.59■■■□□ 2.65
CALB2-202ENST00000349553 GRIN2AQ12879 1464 aa31.54■■■□□ 2.64
CALB2-202ENST00000349553 AEBP2Q6ZN18 517 aaPredicted RBP31.5■■■□□ 2.63
CALB2-202ENST00000349553 ERCC6L2Q5T890 1561 aa31.48■■■□□ 2.63
CALB2-202ENST00000349553 ADAMTS12P58397 1594 aa31.45■■■□□ 2.63
CALB2-202ENST00000349553 CEP170Q5SW79 1584 aa31.43■■■□□ 2.62
CALB2-202ENST00000349553 NUP160Q12769 1436 aa31.41■■■□□ 2.62
CALB2-202ENST00000349553 TOP2BQ02880 1626 aa31.41■■■□□ 2.62
CALB2-202ENST00000349553 FHAD1B1AJZ9 1412 aa31.4■■■□□ 2.62
CALB2-202ENST00000349553 BIVM-ERCC5R4GMW8 1640 aa31.38■■■□□ 2.61
CALB2-202ENST00000349553 ERICH3Q5RHP9 1530 aa31.29■■■□□ 2.6
CALB2-202ENST00000349553 SHROOM2Q13796 1616 aa31.26■■■□□ 2.59
CALB2-202ENST00000349553 PRG4Q92954 1404 aaPredicted RBP31.23■■■□□ 2.59
CALB2-202ENST00000349553 JPH4Q96JJ6 628 aa31.21■■■□□ 2.59
CALB2-202ENST00000349553 NPM1P06748 294 aaKnown RBP eCLIP31.07■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms