RNA–Protein interactions for RNA: ENST00000301671.12

GHDC-201, Transcript of GH3 domain containing, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GHDC, Length 2,650 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-201ENST00000301671 NISCHQ9Y2I1 1504 aa32.08■■■□□ 2.73
GHDC-201ENST00000301671 SHROOM4Q9ULL8 1493 aa28.05■■■□□ 2.08
GHDC-201ENST00000301671 SUPT5HO00267 1087 aaKnown RBP27.64■■■□□ 2.02
GHDC-201ENST00000301671 ZCCHC6Q5VYS8 1495 aaKnown RBP27.16■■□□□ 1.94
GHDC-201ENST00000301671 DCAF8L2P0C7V8 631 aa27.03■■□□□ 1.92
GHDC-201ENST00000301671 CCDC180Q9P1Z9 1646 aa26.94■■□□□ 1.9
GHDC-201ENST00000301671 MYO15BQ96JP2 1530 aa26.87■■□□□ 1.89
GHDC-201ENST00000301671 CHIC1Q5VXU3 224 aa26.85■■□□□ 1.89
GHDC-201ENST00000301671 HRCP23327 699 aa26.56■■□□□ 1.84
GHDC-201ENST00000301671 PCGF6Q9BYE7 350 aa26.51■■□□□ 1.83
GHDC-201ENST00000301671 LOC105371045A0A1W2PR82 267 aa26.27■■□□□ 1.8
GHDC-201ENST00000301671 PPARGC1BQ86YN6 1023 aaKnown RBP26.22■■□□□ 1.79
GHDC-201ENST00000301671 DCAF1Q9Y4B6 1507 aa26.09■■□□□ 1.77
GHDC-201ENST00000301671 TRIM26Q12899 539 aaPredicted RBP25.72■■□□□ 1.71
GHDC-201ENST00000301671 ABCC9O60706 1549 aa25.66■■□□□ 1.7
GHDC-201ENST00000301671 SCRIBQ14160 1630 aa25.62■■□□□ 1.69
GHDC-201ENST00000301671 FAM9AQ8IZU1 332 aaPredicted RBP25.61■■□□□ 1.69
GHDC-201ENST00000301671 RSF1Q96T23 1441 aaPredicted RBP25.61■■□□□ 1.69
GHDC-201ENST00000301671 TRIM41Q8WV44 630 aa25.58■■□□□ 1.68
GHDC-201ENST00000301671 EHMT2Q96KQ7 1210 aa25.57■■□□□ 1.68
GHDC-201ENST00000301671 RB1CC1Q8TDY2 1594 aa25.41■■□□□ 1.66
GHDC-201ENST00000301671 CECR2Q9BXF3 1484 aa25.19■■□□□ 1.62
GHDC-201ENST00000301671 ZEB1P37275 1124 aaPredicted RBP25.17■■□□□ 1.62
GHDC-201ENST00000301671 MROH2BQ7Z745 1585 aa25.07■■□□□ 1.6
GHDC-201ENST00000301671 WIZO95785 1651 aa24.95■■□□□ 1.59
GHDC-201ENST00000301671 NACADO15069 1562 aa24.92■■□□□ 1.58
GHDC-201ENST00000301671 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.84■■□□□ 1.57
GHDC-201ENST00000301671 TTBK1Q5TCY1 1321 aaPredicted RBP24.78■■□□□ 1.56
GHDC-201ENST00000301671 SCAF1Q9H7N4 1312 aaKnown RBP24.78■■□□□ 1.56
GHDC-201ENST00000301671 CCER1Q8TC90 406 aaPredicted RBP24.71■■□□□ 1.55
GHDC-201ENST00000301671 BAZ1AQ9NRL2 1556 aaPredicted RBP24.65■■□□□ 1.54
GHDC-201ENST00000301671 ABCC8Q09428 1581 aa24.6■■□□□ 1.53
GHDC-201ENST00000301671 EIF4G1Q04637 1599 aaKnown RBP24.58■■□□□ 1.53
GHDC-201ENST00000301671 CCDC88BA6NC98 1476 aa24.56■■□□□ 1.52
GHDC-201ENST00000301671 SOGA1O94964 1423 aa24.45■■□□□ 1.51
GHDC-201ENST00000301671 CEP162Q5TB80 1403 aa24.41■■□□□ 1.5
GHDC-201ENST00000301671 TOP2AP11388 1531 aaKnown RBP24.41■■□□□ 1.5
GHDC-201ENST00000301671 NEUROD1Q13562 356 aa24.39■■□□□ 1.49
GHDC-201ENST00000301671 UBTFP17480 764 aaKnown RBP24.38■■□□□ 1.49
GHDC-201ENST00000301671 DIEXFQ68CQ4 756 aaKnown RBP24.37■■□□□ 1.49
GHDC-201ENST00000301671 RUSC2Q8N2Y8 1516 aa24.35■■□□□ 1.49
GHDC-201ENST00000301671 SMARCA2P51531 1590 aa24.35■■□□□ 1.49
GHDC-201ENST00000301671 SMARCA4P51532 1647 aa24.35■■□□□ 1.49
GHDC-201ENST00000301671 ACIN1Q9UKV3 1341 aaKnown RBP24.35■■□□□ 1.49
GHDC-201ENST00000301671 PELP1Q8IZL8 1130 aaKnown RBP24.32■■□□□ 1.48
GHDC-201ENST00000301671 WRNQ14191 1432 aaPredicted RBP eCLIP24.31■■□□□ 1.48
GHDC-201ENST00000301671 CSRNP3Q8WYN3 585 aa24.3■■□□□ 1.48
GHDC-201ENST00000301671 TNIKQ9UKE5 1360 aa24.27■■□□□ 1.48
GHDC-201ENST00000301671 PABPN1Q86U42 306 aaKnown RBP eCLIP24.23■■□□□ 1.47
GHDC-201ENST00000301671 GTF3C3Q9Y5Q9 886 aa24.18■■□□□ 1.46
GHDC-201ENST00000301671 UNC13AQ9UPW8 1703 aa24.14■■□□□ 1.46
GHDC-201ENST00000301671 HNRNPUL2Q1KMD3 747 aaKnown RBP24.1■■□□□ 1.45
GHDC-201ENST00000301671 CENPBP07199 599 aaPredicted RBP24.09■■□□□ 1.45
GHDC-201ENST00000301671 EEA1Q15075 1411 aa24.08■■□□□ 1.45
GHDC-201ENST00000301671 GOLGA3Q08378 1498 aa24.07■■□□□ 1.44
GHDC-201ENST00000301671 RANGAP1P46060 587 aaPredicted RBP24.05■■□□□ 1.44
GHDC-201ENST00000301671 ZNF316A6NFI3 1004 aaPredicted RBP24.05■■□□□ 1.44
GHDC-201ENST00000301671 YTHDC1Q96MU7 727 aaKnown RBP24.01■■□□□ 1.43
GHDC-201ENST00000301671 SYNJ1O43426 1573 aa23.91■■□□□ 1.42
GHDC-201ENST00000301671 CLIP1P30622 1438 aa23.89■■□□□ 1.42
GHDC-201ENST00000301671 CEP164Q9UPV0 1460 aa23.87■■□□□ 1.41
GHDC-201ENST00000301671 MIER1Q8N108 512 aa23.87■■□□□ 1.41
GHDC-201ENST00000301671 BICRAQ9NZM4 1560 aa23.86■■□□□ 1.41
GHDC-201ENST00000301671 APLP2Q06481 763 aa23.81■■□□□ 1.4
GHDC-201ENST00000301671 RAPGEF2Q9Y4G8 1499 aa23.79■■□□□ 1.4
GHDC-201ENST00000301671 KIF21BO75037 1637 aa23.76■■□□□ 1.39
GHDC-201ENST00000301671 VPS8Q8N3P4 1428 aa23.76■■□□□ 1.39
GHDC-201ENST00000301671 PEG3Q9GZU2 1588 aa23.71■■□□□ 1.39
GHDC-201ENST00000301671 ATAD2BQ9ULI0 1458 aa23.7■■□□□ 1.38
GHDC-201ENST00000301671 BAZ1BQ9UIG0 1483 aaKnown RBP23.67■■□□□ 1.38
GHDC-201ENST00000301671 KANK4Q5T7N3 995 aaPredicted RBP23.55■■□□□ 1.36
GHDC-201ENST00000301671 TOP2BQ02880 1626 aa23.47■■□□□ 1.35
GHDC-201ENST00000301671 DHX57Q6P158 1386 aaKnown RBP23.46■■□□□ 1.35
GHDC-201ENST00000301671 ARAP1Q96P48 1450 aa23.43■■□□□ 1.34
GHDC-201ENST00000301671 ITGAEP38570 1179 aa23.41■■□□□ 1.34
GHDC-201ENST00000301671 PRXQ9BXM0 1461 aa23.39■■□□□ 1.33
GHDC-201ENST00000301671 BIVM-ERCC5R4GMW8 1640 aa23.32■■□□□ 1.32
GHDC-201ENST00000301671 ERICH3Q5RHP9 1530 aa23.3■■□□□ 1.32
GHDC-201ENST00000301671 CLSPNQ9HAW4 1339 aa23.29■■□□□ 1.32
GHDC-201ENST00000301671 CUX1P39880 1505 aa23.28■■□□□ 1.32
GHDC-201ENST00000301671 KIF27Q86VH2 1401 aa23.23■■□□□ 1.31
GHDC-201ENST00000301671 RRBP1Q9P2E9 1410 aaKnown RBP23.22■■□□□ 1.31
GHDC-201ENST00000301671 CCNB3Q8WWL7 1395 aa23.2■■□□□ 1.3
GHDC-201ENST00000301671 ARHGAP35Q9NRY4 1499 aa23.18■■□□□ 1.3
GHDC-201ENST00000301671 SUPT16HQ9Y5B9 1047 aaKnown RBP23.15■■□□□ 1.3
GHDC-201ENST00000301671 KCNH8Q96L42 1107 aa23.15■■□□□ 1.3
GHDC-201ENST00000301671 NCAPD3P42695 1498 aa23.1■■□□□ 1.29
GHDC-201ENST00000301671 RAB3GAP2Q9H2M9 1393 aa23.09■■□□□ 1.29
GHDC-201ENST00000301671 MYT1Q01538 1121 aa23.06■■□□□ 1.28
GHDC-201ENST00000301671 HMGXB3Q12766 1538 aa23.05■■□□□ 1.28
GHDC-201ENST00000301671 CUX2O14529 1486 aa23.05■■□□□ 1.28
GHDC-201ENST00000301671 CFTRP13569 1480 aa23.04■■□□□ 1.28
GHDC-201ENST00000301671 P3H3Q8IVL6 736 aa23.04■■□□□ 1.28
GHDC-201ENST00000301671 ATP1B4Q9UN42 357 aaPredicted RBP23.03■■□□□ 1.28
GHDC-201ENST00000301671 SIN3AQ96ST3 1273 aa23.02■■□□□ 1.28
GHDC-201ENST00000301671 IGF1RP08069 1367 aa23.02■■□□□ 1.28
GHDC-201ENST00000301671 FAM50AQ14320 339 aaKnown RBP23.01■■□□□ 1.27
GHDC-201ENST00000301671 MAPKBP1O60336 1514 aa22.98■■□□□ 1.27
GHDC-201ENST00000301671 DDX10Q13206 875 aaKnown RBP22.95■■□□□ 1.27
GHDC-201ENST00000301671 HIRIP3Q9BW71 556 aaPredicted RBP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms