RNA–Protein interactions for RNA: ENST00000403490.2

IMP3-202, Transcript of IMP3, U3 small nucleolar ribonucleoprotein, humanhuman

APPRIS P1 BASIC

Gene IMP3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP3-202ENST00000403490 NISCHQ9Y2I1 1504 aa45.36■■■■■ 4.85
IMP3-202ENST00000403490 CCDC180Q9P1Z9 1646 aa40.46■■■■■ 4.07
IMP3-202ENST00000403490 ABCC9O60706 1549 aa40.06■■■■■ 4
IMP3-202ENST00000403490 RB1CC1Q8TDY2 1594 aa38.37■■■■□ 3.73
IMP3-202ENST00000403490 DCAF8L2P0C7V8 631 aa38.32■■■■□ 3.72
IMP3-202ENST00000403490 NACADO15069 1562 aa38.2■■■■□ 3.71
IMP3-202ENST00000403490 MYO15BQ96JP2 1530 aa37.81■■■■□ 3.64
IMP3-202ENST00000403490 ZCCHC6Q5VYS8 1495 aaKnown RBP37.68■■■■□ 3.62
IMP3-202ENST00000403490 DCAF1Q9Y4B6 1507 aa37.5■■■■□ 3.59
IMP3-202ENST00000403490 PABPN1Q86U42 306 aaKnown RBP eCLIP37.4■■■■□ 3.58
IMP3-202ENST00000403490 UNC13AQ9UPW8 1703 aa37.24■■■■□ 3.55
IMP3-202ENST00000403490 BICRAQ9NZM4 1560 aa37.06■■■■□ 3.52
IMP3-202ENST00000403490 DNAJC5BQ9UF47 199 aa37.02■■■■□ 3.52
IMP3-202ENST00000403490 SCRIBQ14160 1630 aa36.94■■■■□ 3.5
IMP3-202ENST00000403490 SHROOM4Q9ULL8 1493 aa36.79■■■■□ 3.48
IMP3-202ENST00000403490 EIF4G1Q04637 1599 aaKnown RBP36.2■■■■□ 3.39
IMP3-202ENST00000403490 CC2D2AQ9P2K1 1620 aa36.15■■■■□ 3.38
IMP3-202ENST00000403490 CECR2Q9BXF3 1484 aa36.05■■■■□ 3.36
IMP3-202ENST00000403490 SMARCA4P51532 1647 aa35.26■■■■□ 3.24
IMP3-202ENST00000403490 NCAPD3P42695 1498 aa35.24■■■■□ 3.23
IMP3-202ENST00000403490 BAZ1AQ9NRL2 1556 aaPredicted RBP35.24■■■■□ 3.23
IMP3-202ENST00000403490 ATAD2BQ9ULI0 1458 aa35.2■■■■□ 3.23
IMP3-202ENST00000403490 SMARCA2P51531 1590 aa35.19■■■■□ 3.22
IMP3-202ENST00000403490 HMGXB3Q12766 1538 aa35.02■■■■□ 3.2
IMP3-202ENST00000403490 BAZ1BQ9UIG0 1483 aaKnown RBP34.97■■■■□ 3.19
IMP3-202ENST00000403490 MROH2BQ7Z745 1585 aa34.92■■■■□ 3.18
IMP3-202ENST00000403490 PEG3Q9GZU2 1588 aa34.88■■■■□ 3.17
IMP3-202ENST00000403490 ERCC6Q03468 1493 aa34.66■■■■□ 3.14
IMP3-202ENST00000403490 WIZO95785 1651 aa34.51■■■■□ 3.12
IMP3-202ENST00000403490 NESP48681 1621 aa34.48■■■■□ 3.11
IMP3-202ENST00000403490 RSF1Q96T23 1441 aaPredicted RBP34.43■■■■□ 3.1
IMP3-202ENST00000403490 LAMC3Q9Y6N6 1575 aa34.39■■■■□ 3.1
IMP3-202ENST00000403490 CUX2O14529 1486 aa34.34■■■■□ 3.09
IMP3-202ENST00000403490 PDS5BQ9NTI5 1447 aa34.27■■■■□ 3.08
IMP3-202ENST00000403490 CADPSQ9ULU8 1353 aa34.24■■■■□ 3.07
IMP3-202ENST00000403490 TOP2AP11388 1531 aaKnown RBP34.18■■■■□ 3.06
IMP3-202ENST00000403490 KIF21AQ7Z4S6 1674 aa34.01■■■■□ 3.04
IMP3-202ENST00000403490 THOC2Q8NI27 1593 aaKnown RBP33.99■■■■□ 3.03
IMP3-202ENST00000403490 CFTRP13569 1480 aa33.91■■■■□ 3.02
IMP3-202ENST00000403490 MRC2Q9UBG0 1479 aa33.88■■■■□ 3.01
IMP3-202ENST00000403490 CEP164Q9UPV0 1460 aa33.87■■■■□ 3.01
IMP3-202ENST00000403490 FANCD2Q9BXW9 1451 aa33.85■■■■□ 3.01
IMP3-202ENST00000403490 CCDC88BA6NC98 1476 aa33.79■■■■□ 3
IMP3-202ENST00000403490 DNAJC5Q9H3Z4 198 aa33.75■■■□□ 2.99
IMP3-202ENST00000403490 WDR62O43379 1518 aa33.7■■■□□ 2.99
IMP3-202ENST00000403490 PRDM2Q13029 1718 aa33.5■■■□□ 2.95
IMP3-202ENST00000403490 URB2Q14146 1524 aaKnown RBP33.46■■■□□ 2.95
IMP3-202ENST00000403490 SUPT5HO00267 1087 aaKnown RBP33.45■■■□□ 2.95
IMP3-202ENST00000403490 ABCC8Q09428 1581 aa33.3■■■□□ 2.92
IMP3-202ENST00000403490 TOPBP1Q92547 1522 aa33.22■■■□□ 2.91
IMP3-202ENST00000403490 IFT140Q96RY7 1462 aa33.17■■■□□ 2.9
IMP3-202ENST00000403490 DNMBPQ6XZF7 1577 aa33.16■■■□□ 2.9
IMP3-202ENST00000403490 ZNF608Q9ULD9 1512 aaPredicted RBP32.97■■■□□ 2.87
IMP3-202ENST00000403490 OSCARQ8IYS5 282 aa32.96■■■□□ 2.87
IMP3-202ENST00000403490 POLA1P09884 1462 aaPredicted RBP32.91■■■□□ 2.86
IMP3-202ENST00000403490 SOGA1O94964 1423 aa32.85■■■□□ 2.85
IMP3-202ENST00000403490 TARBP1Q13395 1621 aaKnown RBP32.82■■■□□ 2.84
IMP3-202ENST00000403490 EIF4G3O43432 1585 aaKnown RBP32.82■■■□□ 2.84
IMP3-202ENST00000403490 FGD5Q6ZNL6 1462 aa32.8■■■□□ 2.84
IMP3-202ENST00000403490 CUX1P39880 1505 aa32.79■■■□□ 2.84
IMP3-202ENST00000403490 AQRO60306 1485 aaKnown RBP eCLIP32.79■■■□□ 2.84
IMP3-202ENST00000403490 RAD54L2Q9Y4B4 1467 aa32.78■■■□□ 2.84
IMP3-202ENST00000403490 TDRD9Q8NDG6 1382 aaKnown RBP32.7■■■□□ 2.83
IMP3-202ENST00000403490 FBLN2P98095 1184 aa32.65■■■□□ 2.82
IMP3-202ENST00000403490 WDR97A6NE52 1622 aa32.62■■■□□ 2.81
IMP3-202ENST00000403490 TRIM41Q8WV44 630 aa32.59■■■□□ 2.81
IMP3-202ENST00000403490 WRNQ14191 1432 aaPredicted RBP eCLIP32.54■■■□□ 2.8
IMP3-202ENST00000403490 GRIN2BQ13224 1484 aa32.5■■■□□ 2.79
IMP3-202ENST00000403490 SNAPC4Q5SXM2 1469 aa32.48■■■□□ 2.79
IMP3-202ENST00000403490 CHMP7Q8WUX9 453 aaPredicted RBP32.47■■■□□ 2.79
IMP3-202ENST00000403490 ABCA10Q8WWZ4 1543 aa32.45■■■□□ 2.78
IMP3-202ENST00000403490 GAPVD1Q14C86 1478 aa32.44■■■□□ 2.78
IMP3-202ENST00000403490 MAGI1Q96QZ7 1491 aaPredicted RBP32.44■■■□□ 2.78
IMP3-202ENST00000403490 TOP2BQ02880 1626 aa32.43■■■□□ 2.78
IMP3-202ENST00000403490 CHD1O14646 1710 aa32.43■■■□□ 2.78
IMP3-202ENST00000403490 BIVM-ERCC5R4GMW8 1640 aa32.39■■■□□ 2.78
IMP3-202ENST00000403490 SYNJ1O43426 1573 aa32.36■■■□□ 2.77
IMP3-202ENST00000403490 SYNJ2O15056 1496 aa32.32■■■□□ 2.76
IMP3-202ENST00000403490 RIMBP3CA6NJZ7 1639 aa32.29■■■□□ 2.76
IMP3-202ENST00000403490 RIMBP3BA6NNM3 1639 aa32.29■■■□□ 2.76
IMP3-202ENST00000403490 RIMBP3Q9UFD9 1639 aa32.29■■■□□ 2.76
IMP3-202ENST00000403490 ARHGEF11O15085 1522 aa32.29■■■□□ 2.76
IMP3-202ENST00000403490 ABCA5Q8WWZ7 1642 aa32.29■■■□□ 2.76
IMP3-202ENST00000403490 PBRM1Q86U86 1689 aa32.28■■■□□ 2.76
IMP3-202ENST00000403490 CYB5RLQ6IPT4 315 aa32.13■■■□□ 2.73
IMP3-202ENST00000403490 CLASP1Q7Z460 1538 aa32.1■■■□□ 2.73
IMP3-202ENST00000403490 ERICH3Q5RHP9 1530 aa32.08■■■□□ 2.73
IMP3-202ENST00000403490 FHAD1B1AJZ9 1412 aa32.07■■■□□ 2.72
IMP3-202ENST00000403490 GRIN2AQ12879 1464 aa32.04■■■□□ 2.72
IMP3-202ENST00000403490 ADAMTS12P58397 1594 aa32.03■■■□□ 2.72
IMP3-202ENST00000403490 ARAP1Q96P48 1450 aa31.97■■■□□ 2.71
IMP3-202ENST00000403490 KIF27Q86VH2 1401 aa31.93■■■□□ 2.7
IMP3-202ENST00000403490 NUP160Q12769 1436 aa31.88■■■□□ 2.69
IMP3-202ENST00000403490 CEP170Q5SW79 1584 aa31.83■■■□□ 2.69
IMP3-202ENST00000403490 IGF1RP08069 1367 aa31.78■■■□□ 2.68
IMP3-202ENST00000403490 TRHP20396 242 aaPredicted RBP31.72■■■□□ 2.67
IMP3-202ENST00000403490 CUL7Q14999 1698 aa31.7■■■□□ 2.67
IMP3-202ENST00000403490 JPH4Q96JJ6 628 aa31.67■■■□□ 2.66
IMP3-202ENST00000403490 CARMIL1Q5VZK9 1371 aa31.64■■■□□ 2.66
IMP3-202ENST00000403490 SHROOM2Q13796 1616 aa31.62■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms