RNA–Protein interactions for RNA: ENST00000366999.8

NEK2-202, Transcript of NIMA related kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK2, Length 2,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-202ENST00000366999 NISCHQ9Y2I1 1504 aa37.38■■■■□ 3.57
NEK2-202ENST00000366999 CCDC180Q9P1Z9 1646 aa32.43■■■□□ 2.78
NEK2-202ENST00000366999 ZCCHC6Q5VYS8 1495 aaKnown RBP31.47■■■□□ 2.63
NEK2-202ENST00000366999 SHROOM4Q9ULL8 1493 aa30.81■■■□□ 2.52
NEK2-202ENST00000366999 DCAF1Q9Y4B6 1507 aa30.8■■■□□ 2.52
NEK2-202ENST00000366999 DCAF8L2P0C7V8 631 aa30.8■■■□□ 2.52
NEK2-202ENST00000366999 ABCC9O60706 1549 aa30.57■■■□□ 2.49
NEK2-202ENST00000366999 MYO15BQ96JP2 1530 aa30.3■■■□□ 2.44
NEK2-202ENST00000366999 NACADO15069 1562 aa30.09■■■□□ 2.41
NEK2-202ENST00000366999 SCRIBQ14160 1630 aa30■■■□□ 2.39
NEK2-202ENST00000366999 RB1CC1Q8TDY2 1594 aa29.8■■■□□ 2.36
NEK2-202ENST00000366999 SUPT5HO00267 1087 aaKnown RBP29.68■■■□□ 2.34
NEK2-202ENST00000366999 UNC13AQ9UPW8 1703 aa29.47■■■□□ 2.31
NEK2-202ENST00000366999 CECR2Q9BXF3 1484 aa29.15■■■□□ 2.26
NEK2-202ENST00000366999 RSF1Q96T23 1441 aaPredicted RBP29.12■■■□□ 2.25
NEK2-202ENST00000366999 BICRAQ9NZM4 1560 aa29.08■■■□□ 2.25
NEK2-202ENST00000366999 MROH2BQ7Z745 1585 aa28.98■■■□□ 2.23
NEK2-202ENST00000366999 PABPN1Q86U42 306 aaKnown RBP eCLIP28.9■■■□□ 2.22
NEK2-202ENST00000366999 WIZO95785 1651 aa28.8■■■□□ 2.2
NEK2-202ENST00000366999 BAZ1AQ9NRL2 1556 aaPredicted RBP28.78■■■□□ 2.2
NEK2-202ENST00000366999 SMARCA4P51532 1647 aa28.72■■■□□ 2.19
NEK2-202ENST00000366999 CHIC1Q5VXU3 224 aa28.54■■■□□ 2.16
NEK2-202ENST00000366999 TOP2AP11388 1531 aaKnown RBP28.37■■■□□ 2.13
NEK2-202ENST00000366999 PEG3Q9GZU2 1588 aa28.29■■■□□ 2.12
NEK2-202ENST00000366999 SMARCA2P51531 1590 aa28.19■■■□□ 2.1
NEK2-202ENST00000366999 ATAD2BQ9ULI0 1458 aa28.15■■■□□ 2.1
NEK2-202ENST00000366999 EIF4G1Q04637 1599 aaKnown RBP28.13■■■□□ 2.09
NEK2-202ENST00000366999 CCDC88BA6NC98 1476 aa28.13■■■□□ 2.09
NEK2-202ENST00000366999 BAZ1BQ9UIG0 1483 aaKnown RBP27.97■■■□□ 2.07
NEK2-202ENST00000366999 NCAPD3P42695 1498 aa27.8■■■□□ 2.04
NEK2-202ENST00000366999 HMGXB3Q12766 1538 aa27.8■■■□□ 2.04
NEK2-202ENST00000366999 TRIM41Q8WV44 630 aa27.77■■■□□ 2.04
NEK2-202ENST00000366999 ABCC8Q09428 1581 aa27.72■■■□□ 2.03
NEK2-202ENST00000366999 CC2D2AQ9P2K1 1620 aa27.66■■■□□ 2.02
NEK2-202ENST00000366999 LOC105371045A0A1W2PR82 267 aa27.54■■■□□ 2
NEK2-202ENST00000366999 FAM9AQ8IZU1 332 aaPredicted RBP27.43■■□□□ 1.98
NEK2-202ENST00000366999 SYNJ1O43426 1573 aa27.36■■□□□ 1.97
NEK2-202ENST00000366999 WRNQ14191 1432 aaPredicted RBP eCLIP27.35■■□□□ 1.97
NEK2-202ENST00000366999 CFTRP13569 1480 aa27.29■■□□□ 1.96
NEK2-202ENST00000366999 PRDM2Q13029 1718 aa27.23■■□□□ 1.95
NEK2-202ENST00000366999 SOGA1O94964 1423 aa27.2■■□□□ 1.95
NEK2-202ENST00000366999 RUSC2Q8N2Y8 1516 aa27.16■■□□□ 1.94
NEK2-202ENST00000366999 TOP2BQ02880 1626 aa27.14■■□□□ 1.93
NEK2-202ENST00000366999 BIVM-ERCC5R4GMW8 1640 aa27.13■■□□□ 1.93
NEK2-202ENST00000366999 EHMT2Q96KQ7 1210 aa27.12■■□□□ 1.93
NEK2-202ENST00000366999 CADPSQ9ULU8 1353 aa27.11■■□□□ 1.93
NEK2-202ENST00000366999 DNAJC5BQ9UF47 199 aa27.08■■□□□ 1.93
NEK2-202ENST00000366999 CUX1P39880 1505 aa27.07■■□□□ 1.92
NEK2-202ENST00000366999 NESP48681 1621 aa26.98■■□□□ 1.91
NEK2-202ENST00000366999 EEA1Q15075 1411 aa26.95■■□□□ 1.91
NEK2-202ENST00000366999 CSRNP3Q8WYN3 585 aa26.88■■□□□ 1.89
NEK2-202ENST00000366999 FANCD2Q9BXW9 1451 aa26.86■■□□□ 1.89
NEK2-202ENST00000366999 LAMC3Q9Y6N6 1575 aa26.82■■□□□ 1.88
NEK2-202ENST00000366999 KIF21BO75037 1637 aa26.74■■□□□ 1.87
NEK2-202ENST00000366999 GOLGA3Q08378 1498 aa26.71■■□□□ 1.87
NEK2-202ENST00000366999 FGD5Q6ZNL6 1462 aa26.69■■□□□ 1.86
NEK2-202ENST00000366999 CEP164Q9UPV0 1460 aa26.66■■□□□ 1.86
NEK2-202ENST00000366999 DNMBPQ6XZF7 1577 aa26.66■■□□□ 1.86
NEK2-202ENST00000366999 TNIKQ9UKE5 1360 aa26.66■■□□□ 1.86
NEK2-202ENST00000366999 KIF21AQ7Z4S6 1674 aa26.65■■□□□ 1.86
NEK2-202ENST00000366999 TOPBP1Q92547 1522 aa26.63■■□□□ 1.85
NEK2-202ENST00000366999 RAPGEF2Q9Y4G8 1499 aa26.62■■□□□ 1.85
NEK2-202ENST00000366999 CEP162Q5TB80 1403 aa26.6■■□□□ 1.85
NEK2-202ENST00000366999 URB2Q14146 1524 aaKnown RBP26.59■■□□□ 1.85
NEK2-202ENST00000366999 KIF27Q86VH2 1401 aa26.57■■□□□ 1.84
NEK2-202ENST00000366999 UBTFP17480 764 aaKnown RBP26.56■■□□□ 1.84
NEK2-202ENST00000366999 PRXQ9BXM0 1461 aa26.54■■□□□ 1.84
NEK2-202ENST00000366999 CUX2O14529 1486 aa26.54■■□□□ 1.84
NEK2-202ENST00000366999 PDS5BQ9NTI5 1447 aa26.54■■□□□ 1.84
NEK2-202ENST00000366999 POLA1P09884 1462 aaPredicted RBP26.53■■□□□ 1.84
NEK2-202ENST00000366999 RAD54L2Q9Y4B4 1467 aa26.5■■□□□ 1.83
NEK2-202ENST00000366999 ERICH3Q5RHP9 1530 aa26.47■■□□□ 1.83
NEK2-202ENST00000366999 PCGF6Q9BYE7 350 aa26.45■■□□□ 1.82
NEK2-202ENST00000366999 WDR97A6NE52 1622 aa26.41■■□□□ 1.82
NEK2-202ENST00000366999 ABCA10Q8WWZ4 1543 aa26.4■■□□□ 1.82
NEK2-202ENST00000366999 IGF1RP08069 1367 aa26.39■■□□□ 1.82
NEK2-202ENST00000366999 CLIP1P30622 1438 aa26.31■■□□□ 1.8
NEK2-202ENST00000366999 PPARGC1BQ86YN6 1023 aaKnown RBP26.27■■□□□ 1.8
NEK2-202ENST00000366999 MRC2Q9UBG0 1479 aa26.27■■□□□ 1.8
NEK2-202ENST00000366999 TRIM26Q12899 539 aaPredicted RBP26.27■■□□□ 1.8
NEK2-202ENST00000366999 TARBP1Q13395 1621 aaKnown RBP26.25■■□□□ 1.79
NEK2-202ENST00000366999 ABCA5Q8WWZ7 1642 aa26.24■■□□□ 1.79
NEK2-202ENST00000366999 CARMIL1Q5VZK9 1371 aa26.23■■□□□ 1.79
NEK2-202ENST00000366999 RANGAP1P46060 587 aaPredicted RBP26.2■■□□□ 1.79
NEK2-202ENST00000366999 TDRD9Q8NDG6 1382 aaKnown RBP26.18■■□□□ 1.78
NEK2-202ENST00000366999 WDR62O43379 1518 aa26.15■■□□□ 1.78
NEK2-202ENST00000366999 CUL7Q14999 1698 aa26.13■■□□□ 1.77
NEK2-202ENST00000366999 ARAP1Q96P48 1450 aa26.12■■□□□ 1.77
NEK2-202ENST00000366999 VPS8Q8N3P4 1428 aa26.1■■□□□ 1.77
NEK2-202ENST00000366999 GAPVD1Q14C86 1478 aa26.1■■□□□ 1.77
NEK2-202ENST00000366999 THOC2Q8NI27 1593 aaKnown RBP26.1■■□□□ 1.77
NEK2-202ENST00000366999 ERCC6Q03468 1493 aa26.06■■□□□ 1.76
NEK2-202ENST00000366999 ARHGAP35Q9NRY4 1499 aa26.04■■□□□ 1.76
NEK2-202ENST00000366999 PBRM1Q86U86 1689 aa26.04■■□□□ 1.76
NEK2-202ENST00000366999 TTBK1Q5TCY1 1321 aaPredicted RBP26■■□□□ 1.75
NEK2-202ENST00000366999 AQRO60306 1485 aaKnown RBP eCLIP25.98■■□□□ 1.752e-6■■■□□ 15.6
NEK2-202ENST00000366999 ZNF608Q9ULD9 1512 aaPredicted RBP25.97■■□□□ 1.75
NEK2-202ENST00000366999 CTTNBP2Q8WZ74 1663 aa25.97■■□□□ 1.75
NEK2-202ENST00000366999 IFT140Q96RY7 1462 aa25.95■■□□□ 1.74
NEK2-202ENST00000366999 ADAMTS12P58397 1594 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms