Protein–RNA interactions for Protein: Q9NPB8

GPCPD1, Glycerophosphocholine phosphodiesterase GPCPD1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1Q9NPB8 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.38■□□□□ 0.69
GPCPD1Q9NPB8 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.38■□□□□ 0.69
GPCPD1Q9NPB8 AC004449.1-201ENST00000564240 433 ntBASIC19.38■□□□□ 0.69
GPCPD1Q9NPB8 MIR3909-201ENST00000579518 119 ntBASIC19.38■□□□□ 0.69
GPCPD1Q9NPB8 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.38■□□□□ 0.69
GPCPD1Q9NPB8 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.38■□□□□ 0.69
GPCPD1Q9NPB8 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
GPCPD1Q9NPB8 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GPCPD1Q9NPB8 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.38■□□□□ 0.69
GPCPD1Q9NPB8 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GPCPD1Q9NPB8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
GPCPD1Q9NPB8 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.38■□□□□ 0.69
GPCPD1Q9NPB8 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPCPD1Q9NPB8 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GPCPD1Q9NPB8 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GPCPD1Q9NPB8 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPCPD1Q9NPB8 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GPCPD1Q9NPB8 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
GPCPD1Q9NPB8 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPCPD1Q9NPB8 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.37■□□□□ 0.69
GPCPD1Q9NPB8 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.37■□□□□ 0.69
GPCPD1Q9NPB8 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.37■□□□□ 0.69
GPCPD1Q9NPB8 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GPCPD1Q9NPB8 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.37■□□□□ 0.69
GPCPD1Q9NPB8 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPCPD1Q9NPB8 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.37■□□□□ 0.69
GPCPD1Q9NPB8 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPCPD1Q9NPB8 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPCPD1Q9NPB8 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPCPD1Q9NPB8 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
GPCPD1Q9NPB8 FAM58DP-201ENST00000428076 619 ntBASIC19.37■□□□□ 0.69
GPCPD1Q9NPB8 AC109322.1-201ENST00000524499 1264 ntBASIC19.37■□□□□ 0.69
GPCPD1Q9NPB8 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.37■□□□□ 0.69
GPCPD1Q9NPB8 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.37■□□□□ 0.69
GPCPD1Q9NPB8 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.37■□□□□ 0.69
GPCPD1Q9NPB8 AC021097.1-201ENST00000607902 574 ntBASIC19.37■□□□□ 0.69
GPCPD1Q9NPB8 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.37■□□□□ 0.69
GPCPD1Q9NPB8 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPCPD1Q9NPB8 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
GPCPD1Q9NPB8 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GPCPD1Q9NPB8 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPCPD1Q9NPB8 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPCPD1Q9NPB8 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPCPD1Q9NPB8 AC026471.1-201ENST00000564629 3026 ntBASIC19.37■□□□□ 0.69
GPCPD1Q9NPB8 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
GPCPD1Q9NPB8 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
GPCPD1Q9NPB8 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPCPD1Q9NPB8 AC080080.1-201ENST00000625121 2420 ntBASIC19.36■□□□□ 0.69
GPCPD1Q9NPB8 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GPCPD1Q9NPB8 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
GPCPD1Q9NPB8 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
GPCPD1Q9NPB8 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
GPCPD1Q9NPB8 UXT-AS1-201ENST00000590504 1525 ntBASIC19.36■□□□□ 0.69
GPCPD1Q9NPB8 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GPCPD1Q9NPB8 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
GPCPD1Q9NPB8 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
GPCPD1Q9NPB8 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
GPCPD1Q9NPB8 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.36■□□□□ 0.69
GPCPD1Q9NPB8 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.36■□□□□ 0.69
GPCPD1Q9NPB8 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
GPCPD1Q9NPB8 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.36■□□□□ 0.69
GPCPD1Q9NPB8 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.36■□□□□ 0.69
GPCPD1Q9NPB8 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.36■□□□□ 0.69
GPCPD1Q9NPB8 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.36■□□□□ 0.69
GPCPD1Q9NPB8 IGHV3-62-201ENST00000520057 340 ntBASIC19.36■□□□□ 0.69
GPCPD1Q9NPB8 LINC01225-203ENST00000563550 1244 ntBASIC19.36■□□□□ 0.69
GPCPD1Q9NPB8 AL138918.1-201ENST00000568306 659 ntBASIC19.36■□□□□ 0.69
GPCPD1Q9NPB8 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.36■□□□□ 0.69
GPCPD1Q9NPB8 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
GPCPD1Q9NPB8 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.36■□□□□ 0.69
GPCPD1Q9NPB8 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
GPCPD1Q9NPB8 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.36■□□□□ 0.69
GPCPD1Q9NPB8 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GPCPD1Q9NPB8 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.36■□□□□ 0.69
GPCPD1Q9NPB8 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.36■□□□□ 0.69
GPCPD1Q9NPB8 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.36■□□□□ 0.69
GPCPD1Q9NPB8 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GPCPD1Q9NPB8 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.36■□□□□ 0.69
GPCPD1Q9NPB8 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.36■□□□□ 0.69
GPCPD1Q9NPB8 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GPCPD1Q9NPB8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
GPCPD1Q9NPB8 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPCPD1Q9NPB8 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPCPD1Q9NPB8 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPCPD1Q9NPB8 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPCPD1Q9NPB8 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GPCPD1Q9NPB8 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPCPD1Q9NPB8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GPCPD1Q9NPB8 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPCPD1Q9NPB8 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
GPCPD1Q9NPB8 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
GPCPD1Q9NPB8 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPCPD1Q9NPB8 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPCPD1Q9NPB8 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.35■□□□□ 0.69
GPCPD1Q9NPB8 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GPCPD1Q9NPB8 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPCPD1Q9NPB8 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
GPCPD1Q9NPB8 KRT18P32-201ENST00000424695 1287 ntBASIC19.35■□□□□ 0.69
GPCPD1Q9NPB8 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.35■□□□□ 0.69
GPCPD1Q9NPB8 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms