RNA–Protein interactions for RNA: ENST00000627238.1

TRIM29-221, Transcript of tripartite motif containing 29, humanhuman

TSL 5 BASIC

Gene TRIM29, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-221ENST00000627238 NISCHQ9Y2I1 1504 aa41.77■■■■■ 4.28
TRIM29-221ENST00000627238 CCDC180Q9P1Z9 1646 aa37.59■■■■□ 3.61
TRIM29-221ENST00000627238 ABCC9O60706 1549 aa37.49■■■■□ 3.59
TRIM29-221ENST00000627238 RB1CC1Q8TDY2 1594 aa35.77■■■■□ 3.32
TRIM29-221ENST00000627238 NACADO15069 1562 aa35.54■■■■□ 3.28
TRIM29-221ENST00000627238 DNAJC5BQ9UF47 199 aa35.26■■■■□ 3.24
TRIM29-221ENST00000627238 MYO15BQ96JP2 1530 aa35.12■■■■□ 3.21
TRIM29-221ENST00000627238 DCAF8L2P0C7V8 631 aa35■■■■□ 3.19
TRIM29-221ENST00000627238 UNC13AQ9UPW8 1703 aa34.95■■■■□ 3.19
TRIM29-221ENST00000627238 PABPN1Q86U42 306 aaKnown RBP eCLIP34.82■■■■□ 3.16
TRIM29-221ENST00000627238 BICRAQ9NZM4 1560 aa34.74■■■■□ 3.15
TRIM29-221ENST00000627238 ZCCHC6Q5VYS8 1495 aaKnown RBP34.62■■■■□ 3.13
TRIM29-221ENST00000627238 DCAF1Q9Y4B6 1507 aa34.61■■■■□ 3.13
TRIM29-221ENST00000627238 SHROOM4Q9ULL8 1493 aa34.39■■■■□ 3.1
TRIM29-221ENST00000627238 SCRIBQ14160 1630 aa34.08■■■■□ 3.05
TRIM29-221ENST00000627238 CC2D2AQ9P2K1 1620 aa33.93■■■■□ 3.02
TRIM29-221ENST00000627238 EIF4G1Q04637 1599 aaKnown RBP33.87■■■■□ 3.01
TRIM29-221ENST00000627238 CECR2Q9BXF3 1484 aa33.84■■■■□ 3.01
TRIM29-221ENST00000627238 NCAPD3P42695 1498 aa32.8■■■□□ 2.84
TRIM29-221ENST00000627238 ATAD2BQ9ULI0 1458 aa32.65■■■□□ 2.82
TRIM29-221ENST00000627238 SMARCA4P51532 1647 aa32.59■■■□□ 2.81
TRIM29-221ENST00000627238 SMARCA2P51531 1590 aa32.58■■■□□ 2.81
TRIM29-221ENST00000627238 HMGXB3Q12766 1538 aa32.57■■■□□ 2.8
TRIM29-221ENST00000627238 DNAJC5Q9H3Z4 198 aa32.51■■■□□ 2.79
TRIM29-221ENST00000627238 CUX2O14529 1486 aa32.49■■■□□ 2.79
TRIM29-221ENST00000627238 BAZ1AQ9NRL2 1556 aaPredicted RBP32.44■■■□□ 2.78
TRIM29-221ENST00000627238 PEG3Q9GZU2 1588 aa32.38■■■□□ 2.77
TRIM29-221ENST00000627238 ERCC6Q03468 1493 aa32.38■■■□□ 2.77
TRIM29-221ENST00000627238 BAZ1BQ9UIG0 1483 aaKnown RBP32.29■■■□□ 2.76
TRIM29-221ENST00000627238 NESP48681 1621 aa32.19■■■□□ 2.74
TRIM29-221ENST00000627238 MROH2BQ7Z745 1585 aa32.13■■■□□ 2.73
TRIM29-221ENST00000627238 LAMC3Q9Y6N6 1575 aa32.08■■■□□ 2.73
TRIM29-221ENST00000627238 THOC2Q8NI27 1593 aaKnown RBP31.99■■■□□ 2.71
TRIM29-221ENST00000627238 PDS5BQ9NTI5 1447 aa31.85■■■□□ 2.69
TRIM29-221ENST00000627238 KIF21AQ7Z4S6 1674 aa31.83■■■□□ 2.69
TRIM29-221ENST00000627238 CADPSQ9ULU8 1353 aa31.75■■■□□ 2.67
TRIM29-221ENST00000627238 WIZO95785 1651 aa31.72■■■□□ 2.67
TRIM29-221ENST00000627238 MRC2Q9UBG0 1479 aa31.58■■■□□ 2.65
TRIM29-221ENST00000627238 WDR62O43379 1518 aa31.54■■■□□ 2.64
TRIM29-221ENST00000627238 RSF1Q96T23 1441 aaPredicted RBP31.45■■■□□ 2.63
TRIM29-221ENST00000627238 CEP164Q9UPV0 1460 aa31.41■■■□□ 2.62
TRIM29-221ENST00000627238 CFTRP13569 1480 aa31.4■■■□□ 2.62
TRIM29-221ENST00000627238 TOP2AP11388 1531 aaKnown RBP31.39■■■□□ 2.61
TRIM29-221ENST00000627238 FANCD2Q9BXW9 1451 aa31.37■■■□□ 2.61
TRIM29-221ENST00000627238 URB2Q14146 1524 aaKnown RBP31.13■■■□□ 2.57
TRIM29-221ENST00000627238 PRDM2Q13029 1718 aa31.11■■■□□ 2.57
TRIM29-221ENST00000627238 CCDC88BA6NC98 1476 aa30.98■■■□□ 2.55
TRIM29-221ENST00000627238 OSCARQ8IYS5 282 aa30.88■■■□□ 2.53
TRIM29-221ENST00000627238 TRIM41Q8WV44 630 aa30.86■■■□□ 2.53
TRIM29-221ENST00000627238 IFT140Q96RY7 1462 aa30.82■■■□□ 2.53
TRIM29-221ENST00000627238 TOPBP1Q92547 1522 aa30.78■■■□□ 2.52
TRIM29-221ENST00000627238 ABCC8Q09428 1581 aa30.77■■■□□ 2.52
TRIM29-221ENST00000627238 ZNF608Q9ULD9 1512 aaPredicted RBP30.72■■■□□ 2.51
TRIM29-221ENST00000627238 DNMBPQ6XZF7 1577 aa30.68■■■□□ 2.5
TRIM29-221ENST00000627238 EIF4G3O43432 1585 aaKnown RBP30.59■■■□□ 2.49
TRIM29-221ENST00000627238 TARBP1Q13395 1621 aaKnown RBP30.55■■■□□ 2.48
TRIM29-221ENST00000627238 RIMBP3CA6NJZ7 1639 aa30.54■■■□□ 2.48
TRIM29-221ENST00000627238 RIMBP3BA6NNM3 1639 aa30.54■■■□□ 2.48
TRIM29-221ENST00000627238 RIMBP3Q9UFD9 1639 aa30.54■■■□□ 2.48
TRIM29-221ENST00000627238 POLA1P09884 1462 aaPredicted RBP30.46■■■□□ 2.47
TRIM29-221ENST00000627238 ARHGEF11O15085 1522 aa30.44■■■□□ 2.46
TRIM29-221ENST00000627238 AQRO60306 1485 aaKnown RBP eCLIP30.41■■■□□ 2.46
TRIM29-221ENST00000627238 CHD1O14646 1710 aa30.36■■■□□ 2.45
TRIM29-221ENST00000627238 WDR97A6NE52 1622 aa30.33■■■□□ 2.45
TRIM29-221ENST00000627238 RAD54L2Q9Y4B4 1467 aa30.28■■■□□ 2.44
TRIM29-221ENST00000627238 SOGA1O94964 1423 aa30.28■■■□□ 2.44
TRIM29-221ENST00000627238 FGD5Q6ZNL6 1462 aa30.23■■■□□ 2.43
TRIM29-221ENST00000627238 CUX1P39880 1505 aa30.2■■■□□ 2.42
TRIM29-221ENST00000627238 TDRD9Q8NDG6 1382 aaKnown RBP30.19■■■□□ 2.42
TRIM29-221ENST00000627238 SNAPC4Q5SXM2 1469 aa30.12■■■□□ 2.41
TRIM29-221ENST00000627238 ARAP1Q96P48 1450 aa30.12■■■□□ 2.41
TRIM29-221ENST00000627238 MAGI1Q96QZ7 1491 aaPredicted RBP30.12■■■□□ 2.41
TRIM29-221ENST00000627238 FBLN2P98095 1184 aa30.11■■■□□ 2.41
TRIM29-221ENST00000627238 CYB5RLQ6IPT4 315 aa30.09■■■□□ 2.41
TRIM29-221ENST00000627238 CLASP1Q7Z460 1538 aa30.08■■■□□ 2.41
TRIM29-221ENST00000627238 GRIN2BQ13224 1484 aa30.07■■■□□ 2.4
TRIM29-221ENST00000627238 SYNJ1O43426 1573 aa30.02■■■□□ 2.4
TRIM29-221ENST00000627238 SYNJ2O15056 1496 aa29.99■■■□□ 2.39
TRIM29-221ENST00000627238 CHMP7Q8WUX9 453 aaPredicted RBP29.96■■■□□ 2.39
TRIM29-221ENST00000627238 ABCA10Q8WWZ4 1543 aa29.95■■■□□ 2.38
TRIM29-221ENST00000627238 PBRM1Q86U86 1689 aa29.95■■■□□ 2.38
TRIM29-221ENST00000627238 GAPVD1Q14C86 1478 aa29.93■■■□□ 2.38
TRIM29-221ENST00000627238 ABCA5Q8WWZ7 1642 aa29.92■■■□□ 2.38
TRIM29-221ENST00000627238 SUPT5HO00267 1087 aaKnown RBP29.77■■■□□ 2.36
TRIM29-221ENST00000627238 WRNQ14191 1432 aaPredicted RBP eCLIP29.76■■■□□ 2.35
TRIM29-221ENST00000627238 BIVM-ERCC5R4GMW8 1640 aa29.75■■■□□ 2.35
TRIM29-221ENST00000627238 TRHP20396 242 aaPredicted RBP29.74■■■□□ 2.35
TRIM29-221ENST00000627238 TOP2BQ02880 1626 aa29.74■■■□□ 2.35
TRIM29-221ENST00000627238 GRIN2AQ12879 1464 aa29.68■■■□□ 2.34
TRIM29-221ENST00000627238 ADAMTS12P58397 1594 aa29.67■■■□□ 2.34
TRIM29-221ENST00000627238 NUP160Q12769 1436 aa29.62■■■□□ 2.33
TRIM29-221ENST00000627238 FHAD1B1AJZ9 1412 aa29.58■■■□□ 2.33
TRIM29-221ENST00000627238 ERICH3Q5RHP9 1530 aa29.58■■■□□ 2.33
TRIM29-221ENST00000627238 CEP170Q5SW79 1584 aa29.58■■■□□ 2.33
TRIM29-221ENST00000627238 SHROOM2Q13796 1616 aa29.53■■■□□ 2.32
TRIM29-221ENST00000627238 ERCC6L2Q5T890 1561 aa29.51■■■□□ 2.31
TRIM29-221ENST00000627238 RUSC2Q8N2Y8 1516 aa29.26■■■□□ 2.27
TRIM29-221ENST00000627238 PRG4Q92954 1404 aaPredicted RBP29.26■■■□□ 2.27
TRIM29-221ENST00000627238 JPH4Q96JJ6 628 aa29.23■■■□□ 2.27
TRIM29-221ENST00000627238 KIF13AQ9H1H9 1805 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms