RNA–Protein interactions for RNA: ENST00000395226.6

GPAT3-202, Transcript of glycerol-3-phosphate acyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPAT3, Length 2,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAT3-202ENST00000395226 NISCHQ9Y2I1 1504 aa35.64■■■■□ 3.3
GPAT3-202ENST00000395226 SHROOM4Q9ULL8 1493 aa30.83■■■□□ 2.53
GPAT3-202ENST00000395226 SUPT5HO00267 1087 aaKnown RBP30.29■■■□□ 2.44
GPAT3-202ENST00000395226 ZCCHC6Q5VYS8 1495 aaKnown RBP30.15■■■□□ 2.42
GPAT3-202ENST00000395226 CCDC180Q9P1Z9 1646 aa30.1■■■□□ 2.41
GPAT3-202ENST00000395226 DCAF8L2P0C7V8 631 aa29.88■■■□□ 2.37
GPAT3-202ENST00000395226 CHIC1Q5VXU3 224 aa29.39■■■□□ 2.29
GPAT3-202ENST00000395226 MYO15BQ96JP2 1530 aa29.36■■■□□ 2.29
GPAT3-202ENST00000395226 DCAF1Q9Y4B6 1507 aa29.07■■■□□ 2.24
GPAT3-202ENST00000395226 HRCP23327 699 aa28.79■■■□□ 2.2
GPAT3-202ENST00000395226 PCGF6Q9BYE7 350 aa28.74■■■□□ 2.19
GPAT3-202ENST00000395226 LOC105371045A0A1W2PR82 267 aa28.67■■■□□ 2.18
GPAT3-202ENST00000395226 SCRIBQ14160 1630 aa28.5■■■□□ 2.15
GPAT3-202ENST00000395226 ABCC9O60706 1549 aa28.48■■■□□ 2.15
GPAT3-202ENST00000395226 RSF1Q96T23 1441 aaPredicted RBP28.33■■■□□ 2.13
GPAT3-202ENST00000395226 PPARGC1BQ86YN6 1023 aaKnown RBP28.31■■■□□ 2.12
GPAT3-202ENST00000395226 RB1CC1Q8TDY2 1594 aa28.1■■■□□ 2.09
GPAT3-202ENST00000395226 TRIM41Q8WV44 630 aa28.09■■■□□ 2.09
GPAT3-202ENST00000395226 FAM9AQ8IZU1 332 aaPredicted RBP28.05■■■□□ 2.08
GPAT3-202ENST00000395226 TRIM26Q12899 539 aaPredicted RBP28.01■■■□□ 2.07
GPAT3-202ENST00000395226 EHMT2Q96KQ7 1210 aa27.94■■■□□ 2.06
GPAT3-202ENST00000395226 CECR2Q9BXF3 1484 aa27.93■■■□□ 2.06
GPAT3-202ENST00000395226 NACADO15069 1562 aa27.83■■■□□ 2.05
GPAT3-202ENST00000395226 MROH2BQ7Z745 1585 aa27.81■■■□□ 2.04
GPAT3-202ENST00000395226 WIZO95785 1651 aa27.68■■■□□ 2.02
GPAT3-202ENST00000395226 BAZ1AQ9NRL2 1556 aaPredicted RBP27.39■■□□□ 1.98
GPAT3-202ENST00000395226 ZEB1P37275 1124 aaPredicted RBP27.37■■□□□ 1.97
GPAT3-202ENST00000395226 EIF4G1Q04637 1599 aaKnown RBP27.24■■□□□ 1.95
GPAT3-202ENST00000395226 ABCC8Q09428 1581 aa27.18■■□□□ 1.94
GPAT3-202ENST00000395226 TOP2AP11388 1531 aaKnown RBP27.13■■□□□ 1.93
GPAT3-202ENST00000395226 SMARCA4P51532 1647 aa27.12■■□□□ 1.93
GPAT3-202ENST00000395226 CCDC88BA6NC98 1476 aa27.12■■□□□ 1.93
GPAT3-202ENST00000395226 UNC13AQ9UPW8 1703 aa27.07■■□□□ 1.92
GPAT3-202ENST00000395226 TTBK1Q5TCY1 1321 aaPredicted RBP27.05■■□□□ 1.92
GPAT3-202ENST00000395226 SMARCA2P51531 1590 aa27.03■■□□□ 1.92
GPAT3-202ENST00000395226 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.03■■□□□ 1.92
GPAT3-202ENST00000395226 PABPN1Q86U42 306 aaKnown RBP eCLIP26.97■■□□□ 1.91
GPAT3-202ENST00000395226 SOGA1O94964 1423 aa26.95■■□□□ 1.9
GPAT3-202ENST00000395226 CCER1Q8TC90 406 aaPredicted RBP26.91■■□□□ 1.9
GPAT3-202ENST00000395226 SCAF1Q9H7N4 1312 aaKnown RBP26.9■■□□□ 1.9
GPAT3-202ENST00000395226 CEP162Q5TB80 1403 aa26.84■■□□□ 1.89
GPAT3-202ENST00000395226 RUSC2Q8N2Y8 1516 aa26.84■■□□□ 1.89
GPAT3-202ENST00000395226 UBTFP17480 764 aaKnown RBP26.78■■□□□ 1.88
GPAT3-202ENST00000395226 PELP1Q8IZL8 1130 aaKnown RBP26.76■■□□□ 1.87
GPAT3-202ENST00000395226 CSRNP3Q8WYN3 585 aa26.76■■□□□ 1.87
GPAT3-202ENST00000395226 WRNQ14191 1432 aaPredicted RBP eCLIP26.72■■□□□ 1.87
GPAT3-202ENST00000395226 TNIKQ9UKE5 1360 aa26.71■■□□□ 1.87
GPAT3-202ENST00000395226 BICRAQ9NZM4 1560 aa26.71■■□□□ 1.87
GPAT3-202ENST00000395226 EEA1Q15075 1411 aa26.61■■□□□ 1.85
GPAT3-202ENST00000395226 GOLGA3Q08378 1498 aa26.54■■□□□ 1.84
GPAT3-202ENST00000395226 SYNJ1O43426 1573 aa26.49■■□□□ 1.83
GPAT3-202ENST00000395226 PEG3Q9GZU2 1588 aa26.46■■□□□ 1.83
GPAT3-202ENST00000395226 ACIN1Q9UKV3 1341 aaKnown RBP26.43■■□□□ 1.82
GPAT3-202ENST00000395226 DIEXFQ68CQ4 756 aaKnown RBP26.42■■□□□ 1.82
GPAT3-202ENST00000395226 NEUROD1Q13562 356 aa26.41■■□□□ 1.82
GPAT3-202ENST00000395226 ATAD2BQ9ULI0 1458 aa26.4■■□□□ 1.82
GPAT3-202ENST00000395226 RANGAP1P46060 587 aaPredicted RBP26.4■■□□□ 1.82
GPAT3-202ENST00000395226 BAZ1BQ9UIG0 1483 aaKnown RBP26.37■■□□□ 1.81
GPAT3-202ENST00000395226 CEP164Q9UPV0 1460 aa26.36■■□□□ 1.81
GPAT3-202ENST00000395226 HNRNPUL2Q1KMD3 747 aaKnown RBP26.34■■□□□ 1.81
GPAT3-202ENST00000395226 CLIP1P30622 1438 aa26.31■■□□□ 1.8
GPAT3-202ENST00000395226 KIF21BO75037 1637 aa26.28■■□□□ 1.8
GPAT3-202ENST00000395226 RAPGEF2Q9Y4G8 1499 aa26.25■■□□□ 1.79
GPAT3-202ENST00000395226 GTF3C3Q9Y5Q9 886 aa26.2■■□□□ 1.78
GPAT3-202ENST00000395226 CENPBP07199 599 aaPredicted RBP26.18■■□□□ 1.78
GPAT3-202ENST00000395226 VPS8Q8N3P4 1428 aa26.16■■□□□ 1.78
GPAT3-202ENST00000395226 APLP2Q06481 763 aa26.15■■□□□ 1.78
GPAT3-202ENST00000395226 ZNF316A6NFI3 1004 aaPredicted RBP26.15■■□□□ 1.78
GPAT3-202ENST00000395226 TOP2BQ02880 1626 aa26.06■■□□□ 1.76
GPAT3-202ENST00000395226 YTHDC1Q96MU7 727 aaKnown RBP25.97■■□□□ 1.75
GPAT3-202ENST00000395226 BIVM-ERCC5R4GMW8 1640 aa25.93■■□□□ 1.74
GPAT3-202ENST00000395226 MIER1Q8N108 512 aa25.89■■□□□ 1.74
GPAT3-202ENST00000395226 PRXQ9BXM0 1461 aa25.87■■□□□ 1.73
GPAT3-202ENST00000395226 CUX1P39880 1505 aa25.86■■□□□ 1.73
GPAT3-202ENST00000395226 KANK4Q5T7N3 995 aaPredicted RBP25.85■■□□□ 1.73
GPAT3-202ENST00000395226 ARAP1Q96P48 1450 aa25.85■■□□□ 1.73
GPAT3-202ENST00000395226 ERICH3Q5RHP9 1530 aa25.81■■□□□ 1.72
GPAT3-202ENST00000395226 NCAPD3P42695 1498 aa25.8■■□□□ 1.72
GPAT3-202ENST00000395226 HMGXB3Q12766 1538 aa25.76■■□□□ 1.71
GPAT3-202ENST00000395226 KIF27Q86VH2 1401 aa25.74■■□□□ 1.71
GPAT3-202ENST00000395226 DHX57Q6P158 1386 aaKnown RBP25.68■■□□□ 1.7
GPAT3-202ENST00000395226 CFTRP13569 1480 aa25.67■■□□□ 1.7
GPAT3-202ENST00000395226 ITGAEP38570 1179 aa25.64■■□□□ 1.7
GPAT3-202ENST00000395226 ARHGAP35Q9NRY4 1499 aa25.6■■□□□ 1.69
GPAT3-202ENST00000395226 CUX2O14529 1486 aa25.54■■□□□ 1.68
GPAT3-202ENST00000395226 RRBP1Q9P2E9 1410 aaKnown RBP25.54■■□□□ 1.68
GPAT3-202ENST00000395226 CLSPNQ9HAW4 1339 aa25.52■■□□□ 1.68
GPAT3-202ENST00000395226 CCNB3Q8WWL7 1395 aa25.5■■□□□ 1.67
GPAT3-202ENST00000395226 MYT1Q01538 1121 aa25.5■■□□□ 1.67
GPAT3-202ENST00000395226 IGF1RP08069 1367 aa25.49■■□□□ 1.67
GPAT3-202ENST00000395226 P3H3Q8IVL6 736 aa25.39■■□□□ 1.66
GPAT3-202ENST00000395226 CARMIL1Q5VZK9 1371 aa25.39■■□□□ 1.66
GPAT3-202ENST00000395226 CADPSQ9ULU8 1353 aa25.39■■□□□ 1.65
GPAT3-202ENST00000395226 FGD5Q6ZNL6 1462 aa25.38■■□□□ 1.65
GPAT3-202ENST00000395226 PRDM2Q13029 1718 aa25.38■■□□□ 1.65
GPAT3-202ENST00000395226 ATP1B4Q9UN42 357 aaPredicted RBP25.34■■□□□ 1.65
GPAT3-202ENST00000395226 RAB3GAP2Q9H2M9 1393 aa25.33■■□□□ 1.65
GPAT3-202ENST00000395226 TIAM1Q13009 1591 aa25.31■■□□□ 1.64
GPAT3-202ENST00000395226 FAM50AQ14320 339 aaKnown RBP25.28■■□□□ 1.64
GPAT3-202ENST00000395226 PHLDB1Q86UU1 1377 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms