RNA–Protein interactions for RNA: ENST00000246535.3

PDCD2L-201, Transcript of programmed cell death 2 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD2L, Length 1,171 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2L-201ENST00000246535 NISCHQ9Y2I1 1504 aa41.53■■■■■ 4.24
PDCD2L-201ENST00000246535 ABCC9O60706 1549 aa37.52■■■■□ 3.6
PDCD2L-201ENST00000246535 CCDC180Q9P1Z9 1646 aa37.31■■■■□ 3.56
PDCD2L-201ENST00000246535 RB1CC1Q8TDY2 1594 aa35.58■■■■□ 3.29
PDCD2L-201ENST00000246535 DNAJC5BQ9UF47 199 aa35.44■■■■□ 3.26
PDCD2L-201ENST00000246535 NACADO15069 1562 aa35.3■■■■□ 3.24
PDCD2L-201ENST00000246535 DCAF8L2P0C7V8 631 aa35.14■■■■□ 3.22
PDCD2L-201ENST00000246535 PABPN1Q86U42 306 aaKnown RBP eCLIP34.94■■■■□ 3.18
PDCD2L-201ENST00000246535 UNC13AQ9UPW8 1703 aa34.94■■■■□ 3.18
PDCD2L-201ENST00000246535 MYO15BQ96JP2 1530 aa34.72■■■■□ 3.15
PDCD2L-201ENST00000246535 BICRAQ9NZM4 1560 aa34.66■■■■□ 3.14
PDCD2L-201ENST00000246535 ZCCHC6Q5VYS8 1495 aaKnown RBP34.37■■■■□ 3.09
PDCD2L-201ENST00000246535 DCAF1Q9Y4B6 1507 aa34.24■■■■□ 3.07
PDCD2L-201ENST00000246535 SCRIBQ14160 1630 aa34.04■■■■□ 3.04
PDCD2L-201ENST00000246535 SHROOM4Q9ULL8 1493 aa33.98■■■■□ 3.03
PDCD2L-201ENST00000246535 CC2D2AQ9P2K1 1620 aa33.9■■■■□ 3.02
PDCD2L-201ENST00000246535 CECR2Q9BXF3 1484 aa33.78■■■■□ 3
PDCD2L-201ENST00000246535 EIF4G1Q04637 1599 aaKnown RBP33.76■■■□□ 2.99
PDCD2L-201ENST00000246535 NCAPD3P42695 1498 aa32.61■■■□□ 2.81
PDCD2L-201ENST00000246535 DNAJC5Q9H3Z4 198 aa32.56■■■□□ 2.8
PDCD2L-201ENST00000246535 ATAD2BQ9ULI0 1458 aa32.5■■■□□ 2.79
PDCD2L-201ENST00000246535 SMARCA4P51532 1647 aa32.44■■■□□ 2.78
PDCD2L-201ENST00000246535 SMARCA2P51531 1590 aa32.35■■■□□ 2.77
PDCD2L-201ENST00000246535 ERCC6Q03468 1493 aa32.33■■■□□ 2.77
PDCD2L-201ENST00000246535 HMGXB3Q12766 1538 aa32.32■■■□□ 2.76
PDCD2L-201ENST00000246535 CUX2O14529 1486 aa32.32■■■□□ 2.76
PDCD2L-201ENST00000246535 NESP48681 1621 aa32.23■■■□□ 2.75
PDCD2L-201ENST00000246535 BAZ1AQ9NRL2 1556 aaPredicted RBP32.2■■■□□ 2.75
PDCD2L-201ENST00000246535 BAZ1BQ9UIG0 1483 aaKnown RBP32.14■■■□□ 2.74
PDCD2L-201ENST00000246535 PEG3Q9GZU2 1588 aa32.1■■■□□ 2.73
PDCD2L-201ENST00000246535 MROH2BQ7Z745 1585 aa32.04■■■□□ 2.72
PDCD2L-201ENST00000246535 THOC2Q8NI27 1593 aaKnown RBP31.9■■■□□ 2.7
PDCD2L-201ENST00000246535 LAMC3Q9Y6N6 1575 aa31.88■■■□□ 2.69
PDCD2L-201ENST00000246535 KIF21AQ7Z4S6 1674 aa31.81■■■□□ 2.68
PDCD2L-201ENST00000246535 WIZO95785 1651 aa31.68■■■□□ 2.66
PDCD2L-201ENST00000246535 PDS5BQ9NTI5 1447 aa31.67■■■□□ 2.66
PDCD2L-201ENST00000246535 CADPSQ9ULU8 1353 aa31.6■■■□□ 2.65
PDCD2L-201ENST00000246535 MRC2Q9UBG0 1479 aa31.44■■■□□ 2.62
PDCD2L-201ENST00000246535 WDR62O43379 1518 aa31.39■■■□□ 2.61
PDCD2L-201ENST00000246535 RSF1Q96T23 1441 aaPredicted RBP31.29■■■□□ 2.6
PDCD2L-201ENST00000246535 CEP164Q9UPV0 1460 aa31.27■■■□□ 2.6
PDCD2L-201ENST00000246535 FANCD2Q9BXW9 1451 aa31.25■■■□□ 2.59
PDCD2L-201ENST00000246535 CFTRP13569 1480 aa31.21■■■□□ 2.59
PDCD2L-201ENST00000246535 TOP2AP11388 1531 aaKnown RBP31.18■■■□□ 2.58
PDCD2L-201ENST00000246535 TRIM41Q8WV44 630 aa31.07■■■□□ 2.56
PDCD2L-201ENST00000246535 URB2Q14146 1524 aaKnown RBP31.05■■■□□ 2.56
PDCD2L-201ENST00000246535 PRDM2Q13029 1718 aa30.94■■■□□ 2.54
PDCD2L-201ENST00000246535 CCDC88BA6NC98 1476 aa30.88■■■□□ 2.53
PDCD2L-201ENST00000246535 OSCARQ8IYS5 282 aa30.84■■■□□ 2.53
PDCD2L-201ENST00000246535 ZNF608Q9ULD9 1512 aaPredicted RBP30.71■■■□□ 2.51
PDCD2L-201ENST00000246535 TOPBP1Q92547 1522 aa30.67■■■□□ 2.5
PDCD2L-201ENST00000246535 IFT140Q96RY7 1462 aa30.64■■■□□ 2.5
PDCD2L-201ENST00000246535 RIMBP3CA6NJZ7 1639 aa30.53■■■□□ 2.48
PDCD2L-201ENST00000246535 RIMBP3BA6NNM3 1639 aa30.53■■■□□ 2.48
PDCD2L-201ENST00000246535 RIMBP3Q9UFD9 1639 aa30.53■■■□□ 2.48
PDCD2L-201ENST00000246535 DNMBPQ6XZF7 1577 aa30.51■■■□□ 2.47
PDCD2L-201ENST00000246535 ABCC8Q09428 1581 aa30.5■■■□□ 2.47
PDCD2L-201ENST00000246535 EIF4G3O43432 1585 aaKnown RBP30.49■■■□□ 2.47
PDCD2L-201ENST00000246535 TARBP1Q13395 1621 aaKnown RBP30.44■■■□□ 2.46
PDCD2L-201ENST00000246535 AQRO60306 1485 aaKnown RBP eCLIP30.4■■■□□ 2.46
PDCD2L-201ENST00000246535 ARHGEF11O15085 1522 aa30.38■■■□□ 2.45
PDCD2L-201ENST00000246535 CHD1O14646 1710 aa30.36■■■□□ 2.45
PDCD2L-201ENST00000246535 POLA1P09884 1462 aaPredicted RBP30.33■■■□□ 2.45
PDCD2L-201ENST00000246535 RAD54L2Q9Y4B4 1467 aa30.27■■■□□ 2.44
PDCD2L-201ENST00000246535 FBLN2P98095 1184 aa30.19■■■□□ 2.42
PDCD2L-201ENST00000246535 CYB5RLQ6IPT4 315 aa30.18■■■□□ 2.42
PDCD2L-201ENST00000246535 SOGA1O94964 1423 aa30.18■■■□□ 2.42
PDCD2L-201ENST00000246535 TDRD9Q8NDG6 1382 aaKnown RBP30.17■■■□□ 2.42
PDCD2L-201ENST00000246535 FGD5Q6ZNL6 1462 aa30.12■■■□□ 2.41
PDCD2L-201ENST00000246535 CUX1P39880 1505 aa30.1■■■□□ 2.41
PDCD2L-201ENST00000246535 ARAP1Q96P48 1450 aa30.09■■■□□ 2.41
PDCD2L-201ENST00000246535 SNAPC4Q5SXM2 1469 aa30.05■■■□□ 2.4
PDCD2L-201ENST00000246535 WDR97A6NE52 1622 aa30■■■□□ 2.39
PDCD2L-201ENST00000246535 CLASP1Q7Z460 1538 aa29.96■■■□□ 2.39
PDCD2L-201ENST00000246535 CHMP7Q8WUX9 453 aaPredicted RBP29.91■■■□□ 2.38
PDCD2L-201ENST00000246535 GRIN2BQ13224 1484 aa29.91■■■□□ 2.38
PDCD2L-201ENST00000246535 MAGI1Q96QZ7 1491 aaPredicted RBP29.91■■■□□ 2.38
PDCD2L-201ENST00000246535 SYNJ1O43426 1573 aa29.86■■■□□ 2.37
PDCD2L-201ENST00000246535 PBRM1Q86U86 1689 aa29.86■■■□□ 2.37
PDCD2L-201ENST00000246535 TRHP20396 242 aaPredicted RBP29.86■■■□□ 2.37
PDCD2L-201ENST00000246535 SYNJ2O15056 1496 aa29.83■■■□□ 2.37
PDCD2L-201ENST00000246535 GAPVD1Q14C86 1478 aa29.8■■■□□ 2.36
PDCD2L-201ENST00000246535 SUPT5HO00267 1087 aaKnown RBP29.79■■■□□ 2.36
PDCD2L-201ENST00000246535 ABCA5Q8WWZ7 1642 aa29.75■■■□□ 2.35
PDCD2L-201ENST00000246535 ABCA10Q8WWZ4 1543 aa29.75■■■□□ 2.35
PDCD2L-201ENST00000246535 BIVM-ERCC5R4GMW8 1640 aa29.56■■■□□ 2.32
PDCD2L-201ENST00000246535 WRNQ14191 1432 aaPredicted RBP eCLIP29.56■■■□□ 2.32
PDCD2L-201ENST00000246535 ERCC6L2Q5T890 1561 aa29.55■■■□□ 2.32
PDCD2L-201ENST00000246535 GRIN2AQ12879 1464 aa29.55■■■□□ 2.32
PDCD2L-201ENST00000246535 TOP2BQ02880 1626 aa29.54■■■□□ 2.32
PDCD2L-201ENST00000246535 ADAMTS12P58397 1594 aa29.52■■■□□ 2.32
PDCD2L-201ENST00000246535 CEP170Q5SW79 1584 aa29.5■■■□□ 2.31
PDCD2L-201ENST00000246535 NUP160Q12769 1436 aa29.45■■■□□ 2.31
PDCD2L-201ENST00000246535 FHAD1B1AJZ9 1412 aa29.39■■■□□ 2.3
PDCD2L-201ENST00000246535 SHROOM2Q13796 1616 aa29.38■■■□□ 2.29
PDCD2L-201ENST00000246535 ERICH3Q5RHP9 1530 aa29.35■■■□□ 2.29
PDCD2L-201ENST00000246535 PRG4Q92954 1404 aaPredicted RBP29.2■■■□□ 2.26
PDCD2L-201ENST00000246535 JPH4Q96JJ6 628 aa29.16■■■□□ 2.26
PDCD2L-201ENST00000246535 KIF13AQ9H1H9 1805 aa29.13■■■□□ 2.25
PDCD2L-201ENST00000246535 RUSC2Q8N2Y8 1516 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms