RNA–Protein interactions for RNA: ENST00000353383.5

RAI1-201, Transcript of retinoic acid induced 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RAI1, Length 7,662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1-201ENST00000353383 DCAF8L2P0C7V8 631 aa29.86■■■□□ 2.37
RAI1-201ENST00000353383 EHMT2Q96KQ7 1210 aa27.98■■■□□ 2.07
RAI1-201ENST00000353383 SUPT5HO00267 1087 aaKnown RBP27.77■■■□□ 2.04
RAI1-201ENST00000353383 PELP1Q8IZL8 1130 aaKnown RBP27.63■■■□□ 2.01
RAI1-201ENST00000353383 APLP2Q06481 763 aa27.09■■□□□ 1.93
RAI1-201ENST00000353383 SHROOM4Q9ULL8 1493 aa27.07■■□□□ 1.92
RAI1-201ENST00000353383 TTBK1Q5TCY1 1321 aaPredicted RBP26.97■■□□□ 1.91
RAI1-201ENST00000353383 ERICH6Q7L0X2 663 aa26.88■■□□□ 1.89
RAI1-201ENST00000353383 FAM9AQ8IZU1 332 aaPredicted RBP26.88■■□□□ 1.89
RAI1-201ENST00000353383 RANGAP1P46060 587 aaPredicted RBP26.63■■□□□ 1.85
RAI1-201ENST00000353383 ATP1B4Q9UN42 357 aaPredicted RBP26.54■■□□□ 1.84
RAI1-201ENST00000353383 CCER1Q8TC90 406 aaPredicted RBP26.45■■□□□ 1.83
RAI1-201ENST00000353383 PCGF6Q9BYE7 350 aa26.36■■□□□ 1.81
RAI1-201ENST00000353383 MYT1Q01538 1121 aa26.04■■□□□ 1.76
RAI1-201ENST00000353383 CENPBP07199 599 aaPredicted RBP26.02■■□□□ 1.76
RAI1-201ENST00000353383 NEFLP07196 543 aa25.92■■□□□ 1.74
RAI1-201ENST00000353383 YTHDC1Q96MU7 727 aaKnown RBP25.89■■□□□ 1.74
RAI1-201ENST00000353383 MYT1LQ9UL68 1186 aa25.83■■□□□ 1.73
RAI1-201ENST00000353383 CHIC1Q5VXU3 224 aa25.69■■□□□ 1.7
RAI1-201ENST00000353383 DAXXQ9UER7 740 aaPredicted RBP25.68■■□□□ 1.7
RAI1-201ENST00000353383 POLR3GLQ9BT43 218 aa25.66■■□□□ 1.7
RAI1-201ENST00000353383 UBTFP17480 764 aaKnown RBP25.65■■□□□ 1.7
RAI1-201ENST00000353383 CNGB1Q14028 1251 aaPredicted RBP25.55■■□□□ 1.68
RAI1-201ENST00000353383 TRIM41Q8WV44 630 aa25.47■■□□□ 1.67
RAI1-201ENST00000353383 SLC4A1APQ9BWU0 796 aaKnown RBP25.45■■□□□ 1.66
RAI1-201ENST00000353383 PPARGC1BQ86YN6 1023 aaKnown RBP25.42■■□□□ 1.66
RAI1-201ENST00000353383 ZEB1P37275 1124 aaPredicted RBP25.41■■□□□ 1.66
RAI1-201ENST00000353383 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.38■■□□□ 1.65
RAI1-201ENST00000353383 HNRNPUL2Q1KMD3 747 aaKnown RBP25.38■■□□□ 1.65
RAI1-201ENST00000353383 NISCHQ9Y2I1 1504 aa25.35■■□□□ 1.65
RAI1-201ENST00000353383 ITGAEP38570 1179 aa25.27■■□□□ 1.64
RAI1-201ENST00000353383 CLSPNQ9HAW4 1339 aa25.05■■□□□ 1.6
RAI1-201ENST00000353383 ZNF316A6NFI3 1004 aaPredicted RBP25■■□□□ 1.59
RAI1-201ENST00000353383 SLC24A1O60721 1099 aa24.82■■□□□ 1.56
RAI1-201ENST00000353383 BCL11AQ9H165 835 aa24.81■■□□□ 1.56
RAI1-201ENST00000353383 RTL5Q5HYW3 569 aaPredicted RBP24.72■■□□□ 1.55
RAI1-201ENST00000353383 ZBTB47Q9UFB7 747 aaPredicted RBP24.53■■□□□ 1.52
RAI1-201ENST00000353383 BCANQ96GW7 911 aa24.43■■□□□ 1.5
RAI1-201ENST00000353383 TRIM26Q12899 539 aaPredicted RBP24.41■■□□□ 1.5
RAI1-201ENST00000353383 TRIM52Q96A61 297 aa24.35■■□□□ 1.49
RAI1-201ENST00000353383 FAM50AQ14320 339 aaKnown RBP24.35■■□□□ 1.49
RAI1-201ENST00000353383 HRCP23327 699 aa24.31■■□□□ 1.48
RAI1-201ENST00000353383 ZNF326Q5BKZ1 582 aaKnown RBP24.29■■□□□ 1.48
RAI1-201ENST00000353383 NEUROD1Q13562 356 aa24.25■■□□□ 1.47
RAI1-201ENST00000353383 CANXP27824 592 aaKnown RBP24.23■■□□□ 1.47
RAI1-201ENST00000353383 LOC105371045A0A1W2PR82 267 aa24.13■■□□□ 1.45
RAI1-201ENST00000353383 PLPPR3Q6T4P5 718 aa24.12■■□□□ 1.45
RAI1-201ENST00000353383 NEFMP07197 916 aa24.07■■□□□ 1.44
RAI1-201ENST00000353383 FBLN2P98095 1184 aa24.05■■□□□ 1.44
RAI1-201ENST00000353383 DIEXFQ68CQ4 756 aaKnown RBP24.03■■□□□ 1.44
RAI1-201ENST00000353383 CDK11AQ9UQ88 783 aaPredicted RBP23.96■■□□□ 1.43
RAI1-201ENST00000353383 ANP32CO43423 234 aa23.88■■□□□ 1.41
RAI1-201ENST00000353383 NPM2Q86SE8 214 aaKnown RBP23.84■■□□□ 1.41
RAI1-201ENST00000353383 ARID3CA6NKF2 412 aa23.8■■□□□ 1.4
RAI1-201ENST00000353383 HSP90AA1P07900 732 aaKnown RBP23.77■■□□□ 1.4
RAI1-201ENST00000353383 ESF1Q9H501 851 aaKnown RBP23.74■■□□□ 1.39
RAI1-201ENST00000353383 A0A0G2JS52 829 aa23.73■■□□□ 1.39
RAI1-201ENST00000353383 ANP32BQ92688 251 aaKnown RBP23.71■■□□□ 1.39
RAI1-201ENST00000353383 EIF5BO60841 1220 aaKnown RBP23.7■■□□□ 1.38
RAI1-201ENST00000353383 SCAF1Q9H7N4 1312 aaKnown RBP23.69■■□□□ 1.38
RAI1-201ENST00000353383 STAG3Q9UJ98 1225 aa23.67■■□□□ 1.38
RAI1-201ENST00000353383 ANP32AP39687 249 aaKnown RBP23.64■■□□□ 1.37
RAI1-201ENST00000353383 CHGAP10645 457 aaKnown RBP23.61■■□□□ 1.37
RAI1-201ENST00000353383 ZNF777Q9ULD5 760 aaPredicted RBP23.59■■□□□ 1.37
RAI1-201ENST00000353383 GTF3C3Q9Y5Q9 886 aa23.58■■□□□ 1.37
RAI1-201ENST00000353383 PLEKHG5O94827 1062 aa23.55■■□□□ 1.36
RAI1-201ENST00000353383 ARXQ96QS3 562 aa23.54■■□□□ 1.36
RAI1-201ENST00000353383 P3H3Q8IVL6 736 aa23.51■■□□□ 1.35
RAI1-201ENST00000353383 CDK11BP21127 795 aaKnown RBP23.51■■□□□ 1.35
RAI1-201ENST00000353383 PABPN1Q86U42 306 aaKnown RBP eCLIP23.5■■□□□ 1.35
RAI1-201ENST00000353383 SALL2Q9Y467 1007 aaPredicted RBP23.47■■□□□ 1.35
RAI1-201ENST00000353383 TULP1O00294 542 aaPredicted RBP23.42■■□□□ 1.34
RAI1-201ENST00000353383 UPF2Q9HAU5 1272 aaKnown RBP23.41■■□□□ 1.34
RAI1-201ENST00000353383 ZBTB7CA1YPR0 619 aa23.37■■□□□ 1.33
RAI1-201ENST00000353383 SENP3Q9H4L4 574 aaPredicted RBP23.35■■□□□ 1.33
RAI1-201ENST00000353383 NBR1Q14596 966 aa23.21■■□□□ 1.31
RAI1-201ENST00000353383 C14orf37Q86TY3 774 aa23.21■■□□□ 1.31
RAI1-201ENST00000353383 FAM9BQ8IZU0 186 aa23.2■■□□□ 1.3
RAI1-201ENST00000353383 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.18■■□□□ 1.3
RAI1-201ENST00000353383 FKBP8Q14318 412 aa23.14■■□□□ 1.29
RAI1-201ENST00000353383 GLIPR1L2Q4G1C9 344 aa23.12■■□□□ 1.29
RAI1-201ENST00000353383 NPM1P06748 294 aaKnown RBP eCLIP23.12■■□□□ 1.29
RAI1-201ENST00000353383 NCBP3Q53F19 620 aaKnown RBP23.11■■□□□ 1.29
RAI1-201ENST00000353383 TPRNQ4KMQ1 711 aa23.09■■□□□ 1.29
RAI1-201ENST00000353383 HNRNPUQ00839 825 aaKnown RBP eCLIP23.07■■□□□ 1.28
RAI1-201ENST00000353383 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.06■■□□□ 1.28
RAI1-201ENST00000353383 TAOK2Q9UL54 1235 aa23.03■■□□□ 1.28
RAI1-201ENST00000353383 HAP1P54257 671 aaPredicted RBP23.03■■□□□ 1.28
RAI1-201ENST00000353383 MYH16Q9H6N6 1097 aa23.03■■□□□ 1.28
RAI1-201ENST00000353383 ABCC9O60706 1549 aa23.03■■□□□ 1.28
RAI1-201ENST00000353383 WDR43Q15061 677 aaKnown RBP eCLIP23.02■■□□□ 1.28
RAI1-201ENST00000353383 TMC1Q8TDI8 760 aa22.99■■□□□ 1.27
RAI1-201ENST00000353383 KDM2AQ9Y2K7 1162 aa22.99■■□□□ 1.27
RAI1-201ENST00000353383 CCDC136Q96JN2 1154 aa22.96■■□□□ 1.27
RAI1-201ENST00000353383 TONSLQ96HA7 1378 aa22.94■■□□□ 1.26
RAI1-201ENST00000353383 NPHP1O15259 732 aa22.92■■□□□ 1.26
RAI1-201ENST00000353383 DDX10Q13206 875 aaKnown RBP22.89■■□□□ 1.25
RAI1-201ENST00000353383 NCLP19338 710 aaKnown RBP22.87■■□□□ 1.25
RAI1-201ENST00000353383 CHIC2Q9UKJ5 165 aa22.87■■□□□ 1.25
RAI1-201ENST00000353383 ZRSR1Q15695 479 aaKnown RBP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms