RNA–Protein interactions for RNA: ENST00000615885.4

IFFO1-211, Transcript of intermediate filament family orphan 1, humanhuman

TSL 5 BASIC

Gene IFFO1, Length 2,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-211ENST00000615885 NISCHQ9Y2I1 1504 aa35.57■■■■□ 3.28
IFFO1-211ENST00000615885 SHROOM4Q9ULL8 1493 aa30.89■■■□□ 2.54
IFFO1-211ENST00000615885 SUPT5HO00267 1087 aaKnown RBP30.36■■■□□ 2.45
IFFO1-211ENST00000615885 ZCCHC6Q5VYS8 1495 aaKnown RBP30.08■■■□□ 2.41
IFFO1-211ENST00000615885 DCAF8L2P0C7V8 631 aa29.94■■■□□ 2.38
IFFO1-211ENST00000615885 CCDC180Q9P1Z9 1646 aa29.93■■■□□ 2.38
IFFO1-211ENST00000615885 CHIC1Q5VXU3 224 aa29.43■■■□□ 2.3
IFFO1-211ENST00000615885 MYO15BQ96JP2 1530 aa29.39■■■□□ 2.3
IFFO1-211ENST00000615885 DCAF1Q9Y4B6 1507 aa28.96■■■□□ 2.23
IFFO1-211ENST00000615885 PCGF6Q9BYE7 350 aa28.83■■■□□ 2.21
IFFO1-211ENST00000615885 HRCP23327 699 aa28.77■■■□□ 2.2
IFFO1-211ENST00000615885 LOC105371045A0A1W2PR82 267 aa28.76■■■□□ 2.19
IFFO1-211ENST00000615885 SCRIBQ14160 1630 aa28.43■■■□□ 2.14
IFFO1-211ENST00000615885 PPARGC1BQ86YN6 1023 aaKnown RBP28.42■■■□□ 2.14
IFFO1-211ENST00000615885 ABCC9O60706 1549 aa28.4■■■□□ 2.14
IFFO1-211ENST00000615885 RSF1Q96T23 1441 aaPredicted RBP28.31■■■□□ 2.12
IFFO1-211ENST00000615885 FAM9AQ8IZU1 332 aaPredicted RBP28.11■■■□□ 2.09
IFFO1-211ENST00000615885 TRIM41Q8WV44 630 aa28.11■■■□□ 2.09
IFFO1-211ENST00000615885 RB1CC1Q8TDY2 1594 aa28.06■■■□□ 2.08
IFFO1-211ENST00000615885 EHMT2Q96KQ7 1210 aa28.05■■■□□ 2.08
IFFO1-211ENST00000615885 TRIM26Q12899 539 aaPredicted RBP28.04■■■□□ 2.08
IFFO1-211ENST00000615885 CECR2Q9BXF3 1484 aa27.92■■■□□ 2.06
IFFO1-211ENST00000615885 MROH2BQ7Z745 1585 aa27.78■■■□□ 2.04
IFFO1-211ENST00000615885 NACADO15069 1562 aa27.72■■■□□ 2.03
IFFO1-211ENST00000615885 WIZO95785 1651 aa27.64■■■□□ 2.01
IFFO1-211ENST00000615885 ZEB1P37275 1124 aaPredicted RBP27.34■■□□□ 1.97
IFFO1-211ENST00000615885 BAZ1AQ9NRL2 1556 aaPredicted RBP27.3■■□□□ 1.96
IFFO1-211ENST00000615885 ABCC8Q09428 1581 aa27.17■■□□□ 1.94
IFFO1-211ENST00000615885 EIF4G1Q04637 1599 aaKnown RBP27.16■■□□□ 1.94
IFFO1-211ENST00000615885 TTBK1Q5TCY1 1321 aaPredicted RBP27.14■■□□□ 1.94
IFFO1-211ENST00000615885 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.1■■□□□ 1.93
IFFO1-211ENST00000615885 CCDC88BA6NC98 1476 aa27.09■■□□□ 1.93
IFFO1-211ENST00000615885 TOP2AP11388 1531 aaKnown RBP27.04■■□□□ 1.92
IFFO1-211ENST00000615885 SMARCA4P51532 1647 aa27.04■■□□□ 1.92
IFFO1-211ENST00000615885 PABPN1Q86U42 306 aaKnown RBP eCLIP27■■□□□ 1.91
IFFO1-211ENST00000615885 SMARCA2P51531 1590 aa26.97■■□□□ 1.91
IFFO1-211ENST00000615885 SOGA1O94964 1423 aa26.96■■□□□ 1.91
IFFO1-211ENST00000615885 UNC13AQ9UPW8 1703 aa26.95■■□□□ 1.91
IFFO1-211ENST00000615885 CCER1Q8TC90 406 aaPredicted RBP26.94■■□□□ 1.9
IFFO1-211ENST00000615885 RUSC2Q8N2Y8 1516 aa26.86■■□□□ 1.89
IFFO1-211ENST00000615885 CEP162Q5TB80 1403 aa26.83■■□□□ 1.89
IFFO1-211ENST00000615885 UBTFP17480 764 aaKnown RBP26.81■■□□□ 1.88
IFFO1-211ENST00000615885 CSRNP3Q8WYN3 585 aa26.77■■□□□ 1.88
IFFO1-211ENST00000615885 SCAF1Q9H7N4 1312 aaKnown RBP26.71■■□□□ 1.87
IFFO1-211ENST00000615885 TNIKQ9UKE5 1360 aa26.69■■□□□ 1.86
IFFO1-211ENST00000615885 WRNQ14191 1432 aaPredicted RBP eCLIP26.69■■□□□ 1.86
IFFO1-211ENST00000615885 BICRAQ9NZM4 1560 aa26.64■■□□□ 1.85
IFFO1-211ENST00000615885 EEA1Q15075 1411 aa26.54■■□□□ 1.84
IFFO1-211ENST00000615885 GOLGA3Q08378 1498 aa26.49■■□□□ 1.83
IFFO1-211ENST00000615885 RANGAP1P46060 587 aaPredicted RBP26.47■■□□□ 1.83
IFFO1-211ENST00000615885 DIEXFQ68CQ4 756 aaKnown RBP26.47■■□□□ 1.83
IFFO1-211ENST00000615885 SYNJ1O43426 1573 aa26.44■■□□□ 1.82
IFFO1-211ENST00000615885 HNRNPUL2Q1KMD3 747 aaKnown RBP26.39■■□□□ 1.82
IFFO1-211ENST00000615885 NEUROD1Q13562 356 aa26.38■■□□□ 1.81
IFFO1-211ENST00000615885 PEG3Q9GZU2 1588 aa26.37■■□□□ 1.81
IFFO1-211ENST00000615885 ATAD2BQ9ULI0 1458 aa26.36■■□□□ 1.81
IFFO1-211ENST00000615885 CEP164Q9UPV0 1460 aa26.31■■□□□ 1.8
IFFO1-211ENST00000615885 ACIN1Q9UKV3 1341 aaKnown RBP26.31■■□□□ 1.8
IFFO1-211ENST00000615885 BAZ1BQ9UIG0 1483 aaKnown RBP26.31■■□□□ 1.8
IFFO1-211ENST00000615885 CLIP1P30622 1438 aa26.29■■□□□ 1.8
IFFO1-211ENST00000615885 RAPGEF2Q9Y4G8 1499 aa26.24■■□□□ 1.79
IFFO1-211ENST00000615885 KIF21BO75037 1637 aa26.2■■□□□ 1.78
IFFO1-211ENST00000615885 ZNF316A6NFI3 1004 aaPredicted RBP26.17■■□□□ 1.78
IFFO1-211ENST00000615885 APLP2Q06481 763 aa26.15■■□□□ 1.78
IFFO1-211ENST00000615885 VPS8Q8N3P4 1428 aa26.13■■□□□ 1.77
IFFO1-211ENST00000615885 GTF3C3Q9Y5Q9 886 aa26.12■■□□□ 1.77
IFFO1-211ENST00000615885 CENPBP07199 599 aaPredicted RBP26.06■■□□□ 1.76
IFFO1-211ENST00000615885 YTHDC1Q96MU7 727 aaKnown RBP26.04■■□□□ 1.76
IFFO1-211ENST00000615885 TOP2BQ02880 1626 aa25.99■■□□□ 1.75
IFFO1-211ENST00000615885 PELP1Q8IZL8 1130 aaKnown RBP25.97■■□□□ 1.75
IFFO1-211ENST00000615885 MIER1Q8N108 512 aa25.94■■□□□ 1.74
IFFO1-211ENST00000615885 KANK4Q5T7N3 995 aaPredicted RBP25.9■■□□□ 1.74
IFFO1-211ENST00000615885 PRXQ9BXM0 1461 aa25.84■■□□□ 1.73
IFFO1-211ENST00000615885 BIVM-ERCC5R4GMW8 1640 aa25.83■■□□□ 1.73
IFFO1-211ENST00000615885 ARAP1Q96P48 1450 aa25.82■■□□□ 1.72
IFFO1-211ENST00000615885 CUX1P39880 1505 aa25.81■■□□□ 1.72
IFFO1-211ENST00000615885 NCAPD3P42695 1498 aa25.74■■□□□ 1.71
IFFO1-211ENST00000615885 ERICH3Q5RHP9 1530 aa25.73■■□□□ 1.71
IFFO1-211ENST00000615885 KIF27Q86VH2 1401 aa25.7■■□□□ 1.7
IFFO1-211ENST00000615885 ITGAEP38570 1179 aa25.7■■□□□ 1.7
IFFO1-211ENST00000615885 DHX57Q6P158 1386 aaKnown RBP25.69■■□□□ 1.7
IFFO1-211ENST00000615885 HMGXB3Q12766 1538 aa25.66■■□□□ 1.7
IFFO1-211ENST00000615885 CFTRP13569 1480 aa25.62■■□□□ 1.69
IFFO1-211ENST00000615885 ARHGAP35Q9NRY4 1499 aa25.59■■□□□ 1.69
IFFO1-211ENST00000615885 RRBP1Q9P2E9 1410 aaKnown RBP25.52■■□□□ 1.68
IFFO1-211ENST00000615885 CUX2O14529 1486 aa25.51■■□□□ 1.67
IFFO1-211ENST00000615885 CCNB3Q8WWL7 1395 aa25.49■■□□□ 1.67
IFFO1-211ENST00000615885 CLSPNQ9HAW4 1339 aa25.49■■□□□ 1.67
IFFO1-211ENST00000615885 IGF1RP08069 1367 aa25.49■■□□□ 1.67
IFFO1-211ENST00000615885 P3H3Q8IVL6 736 aa25.44■■□□□ 1.66
IFFO1-211ENST00000615885 ATP1B4Q9UN42 357 aaPredicted RBP25.38■■□□□ 1.65
IFFO1-211ENST00000615885 CARMIL1Q5VZK9 1371 aa25.38■■□□□ 1.65
IFFO1-211ENST00000615885 CADPSQ9ULU8 1353 aa25.36■■□□□ 1.65
IFFO1-211ENST00000615885 FGD5Q6ZNL6 1462 aa25.34■■□□□ 1.65
IFFO1-211ENST00000615885 RAB3GAP2Q9H2M9 1393 aa25.34■■□□□ 1.65
IFFO1-211ENST00000615885 FAM50AQ14320 339 aaKnown RBP25.3■■□□□ 1.64
IFFO1-211ENST00000615885 PHLDB1Q86UU1 1377 aa25.27■■□□□ 1.64
IFFO1-211ENST00000615885 TIAM1Q13009 1591 aa25.26■■□□□ 1.63
IFFO1-211ENST00000615885 SIN3AQ96ST3 1273 aa25.23■■□□□ 1.63
IFFO1-211ENST00000615885 PRDM2Q13029 1718 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms