RNA–Protein interactions for RNA: ENST00000378623.5

LRP4-201, Transcript of LDL receptor related protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP4, Length 8,076 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP4-201ENST00000378623 DCAF8L2P0C7V8 631 aa29.92■■■□□ 2.38
LRP4-201ENST00000378623 EHMT2Q96KQ7 1210 aa28.08■■■□□ 2.09
LRP4-201ENST00000378623 SUPT5HO00267 1087 aaKnown RBP27.87■■■□□ 2.05
LRP4-201ENST00000378623 PELP1Q8IZL8 1130 aaKnown RBP27.61■■■□□ 2.01
LRP4-201ENST00000378623 SHROOM4Q9ULL8 1493 aa27.21■■□□□ 1.95
LRP4-201ENST00000378623 TTBK1Q5TCY1 1321 aaPredicted RBP27.09■■□□□ 1.93
LRP4-201ENST00000378623 APLP2Q06481 763 aa27.01■■□□□ 1.91
LRP4-201ENST00000378623 ERICH6Q7L0X2 663 aa26.94■■□□□ 1.9
LRP4-201ENST00000378623 RANGAP1P46060 587 aaPredicted RBP26.67■■□□□ 1.86
LRP4-201ENST00000378623 FAM9AQ8IZU1 332 aaPredicted RBP26.62■■□□□ 1.85
LRP4-201ENST00000378623 ATP1B4Q9UN42 357 aaPredicted RBP26.49■■□□□ 1.83
LRP4-201ENST00000378623 PCGF6Q9BYE7 350 aa26.46■■□□□ 1.83
LRP4-201ENST00000378623 CCER1Q8TC90 406 aaPredicted RBP26.42■■□□□ 1.82
LRP4-201ENST00000378623 MYT1Q01538 1121 aa26.18■■□□□ 1.78
LRP4-201ENST00000378623 CENPBP07199 599 aaPredicted RBP26.11■■□□□ 1.77
LRP4-201ENST00000378623 YTHDC1Q96MU7 727 aaKnown RBP26.07■■□□□ 1.76
LRP4-201ENST00000378623 NEFLP07196 543 aa25.94■■□□□ 1.74
LRP4-201ENST00000378623 MYT1LQ9UL68 1186 aa25.74■■□□□ 1.71
LRP4-201ENST00000378623 CHIC1Q5VXU3 224 aa25.69■■□□□ 1.7
LRP4-201ENST00000378623 NISCHQ9Y2I1 1504 aa25.69■■□□□ 1.7
LRP4-201ENST00000378623 POLR3GLQ9BT43 218 aa25.67■■□□□ 1.7
LRP4-201ENST00000378623 UBTFP17480 764 aaKnown RBP25.65■■□□□ 1.7
LRP4-201ENST00000378623 DAXXQ9UER7 740 aaPredicted RBP25.65■■□□□ 1.7
LRP4-201ENST00000378623 CNGB1Q14028 1251 aaPredicted RBP25.6■■□□□ 1.69
LRP4-201ENST00000378623 PPARGC1BQ86YN6 1023 aaKnown RBP25.59■■□□□ 1.69
LRP4-201ENST00000378623 TRIM41Q8WV44 630 aa25.52■■□□□ 1.68
LRP4-201ENST00000378623 ZEB1P37275 1124 aaPredicted RBP25.5■■□□□ 1.67
LRP4-201ENST00000378623 SLC4A1APQ9BWU0 796 aaKnown RBP25.37■■□□□ 1.65
LRP4-201ENST00000378623 ITGAEP38570 1179 aa25.31■■□□□ 1.64
LRP4-201ENST00000378623 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.3■■□□□ 1.64
LRP4-201ENST00000378623 HNRNPUL2Q1KMD3 747 aaKnown RBP25.3■■□□□ 1.64
LRP4-201ENST00000378623 CLSPNQ9HAW4 1339 aa25.02■■□□□ 1.6
LRP4-201ENST00000378623 ZNF316A6NFI3 1004 aaPredicted RBP25.02■■□□□ 1.6
LRP4-201ENST00000378623 BCL11AQ9H165 835 aa24.81■■□□□ 1.56
LRP4-201ENST00000378623 RTL5Q5HYW3 569 aaPredicted RBP24.78■■□□□ 1.56
LRP4-201ENST00000378623 SLC24A1O60721 1099 aa24.72■■□□□ 1.55
LRP4-201ENST00000378623 TRIM26Q12899 539 aaPredicted RBP24.56■■□□□ 1.52
LRP4-201ENST00000378623 HRCP23327 699 aa24.51■■□□□ 1.51
LRP4-201ENST00000378623 ZBTB47Q9UFB7 747 aaPredicted RBP24.44■■□□□ 1.5
LRP4-201ENST00000378623 BCANQ96GW7 911 aa24.44■■□□□ 1.5
LRP4-201ENST00000378623 FAM50AQ14320 339 aaKnown RBP24.37■■□□□ 1.49
LRP4-201ENST00000378623 TRIM52Q96A61 297 aa24.36■■□□□ 1.49
LRP4-201ENST00000378623 LOC105371045A0A1W2PR82 267 aa24.32■■□□□ 1.48
LRP4-201ENST00000378623 NEUROD1Q13562 356 aa24.32■■□□□ 1.48
LRP4-201ENST00000378623 ZNF326Q5BKZ1 582 aaKnown RBP24.31■■□□□ 1.48
LRP4-201ENST00000378623 PLPPR3Q6T4P5 718 aa24.29■■□□□ 1.48
LRP4-201ENST00000378623 CANXP27824 592 aaKnown RBP24.22■■□□□ 1.47
LRP4-201ENST00000378623 FBLN2P98095 1184 aa24.21■■□□□ 1.47
LRP4-201ENST00000378623 DIEXFQ68CQ4 756 aaKnown RBP24.18■■□□□ 1.46
LRP4-201ENST00000378623 CDK11AQ9UQ88 783 aaPredicted RBP24.04■■□□□ 1.44
LRP4-201ENST00000378623 NPM2Q86SE8 214 aaKnown RBP23.96■■□□□ 1.43
LRP4-201ENST00000378623 NEFMP07197 916 aa23.94■■□□□ 1.42
LRP4-201ENST00000378623 ANP32CO43423 234 aa23.93■■□□□ 1.42
LRP4-201ENST00000378623 ARID3CA6NKF2 412 aa23.9■■□□□ 1.42
LRP4-201ENST00000378623 PABPN1Q86U42 306 aaKnown RBP eCLIP23.88■■□□□ 1.41
LRP4-201ENST00000378623 GTF3C3Q9Y5Q9 886 aa23.83■■□□□ 1.4
LRP4-201ENST00000378623 EIF5BO60841 1220 aaKnown RBP23.82■■□□□ 1.4
LRP4-201ENST00000378623 HSP90AA1P07900 732 aaKnown RBP23.74■■□□□ 1.39
LRP4-201ENST00000378623 ANP32AP39687 249 aaKnown RBP23.7■■□□□ 1.39
LRP4-201ENST00000378623 ANP32BQ92688 251 aaKnown RBP23.68■■□□□ 1.38
LRP4-201ENST00000378623 ESF1Q9H501 851 aaKnown RBP23.68■■□□□ 1.38
LRP4-201ENST00000378623 A0A0G2JS52 829 aa23.66■■□□□ 1.38
LRP4-201ENST00000378623 ARXQ96QS3 562 aa23.66■■□□□ 1.38
LRP4-201ENST00000378623 SCAF1Q9H7N4 1312 aaKnown RBP23.65■■□□□ 1.38
LRP4-201ENST00000378623 PLEKHG5O94827 1062 aa23.58■■□□□ 1.37
LRP4-201ENST00000378623 ZNF777Q9ULD5 760 aaPredicted RBP23.58■■□□□ 1.36
LRP4-201ENST00000378623 STAG3Q9UJ98 1225 aa23.57■■□□□ 1.36
LRP4-201ENST00000378623 CHGAP10645 457 aaKnown RBP23.56■■□□□ 1.36
LRP4-201ENST00000378623 P3H3Q8IVL6 736 aa23.56■■□□□ 1.36
LRP4-201ENST00000378623 SALL2Q9Y467 1007 aaPredicted RBP23.54■■□□□ 1.36
LRP4-201ENST00000378623 ABCC9O60706 1549 aa23.53■■□□□ 1.36
LRP4-201ENST00000378623 SENP3Q9H4L4 574 aaPredicted RBP23.47■■□□□ 1.35
LRP4-201ENST00000378623 NBR1Q14596 966 aa23.38■■□□□ 1.33
LRP4-201ENST00000378623 UPF2Q9HAU5 1272 aaKnown RBP23.38■■□□□ 1.33
LRP4-201ENST00000378623 CDK11BP21127 795 aaKnown RBP23.37■■□□□ 1.33
LRP4-201ENST00000378623 TULP1O00294 542 aaPredicted RBP23.36■■□□□ 1.33
LRP4-201ENST00000378623 ZBTB7CA1YPR0 619 aa23.33■■□□□ 1.32
LRP4-201ENST00000378623 FKBP8Q14318 412 aa23.3■■□□□ 1.32
LRP4-201ENST00000378623 FAM9BQ8IZU0 186 aa23.29■■□□□ 1.32
LRP4-201ENST00000378623 GLIPR1L2Q4G1C9 344 aa23.18■■□□□ 1.3
LRP4-201ENST00000378623 HNRNPUQ00839 825 aaKnown RBP eCLIP23.16■■□□□ 1.3
LRP4-201ENST00000378623 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.16■■□□□ 1.3
LRP4-201ENST00000378623 TPRNQ4KMQ1 711 aa23.16■■□□□ 1.3
LRP4-201ENST00000378623 NPM1P06748 294 aaKnown RBP eCLIP23.15■■□□□ 1.3
LRP4-201ENST00000378623 C14orf37Q86TY3 774 aa23.12■■□□□ 1.29
LRP4-201ENST00000378623 TAOK2Q9UL54 1235 aa23.04■■□□□ 1.28
LRP4-201ENST00000378623 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.04■■□□□ 1.28
LRP4-201ENST00000378623 CCDC136Q96JN2 1154 aa23.03■■□□□ 1.28
LRP4-201ENST00000378623 ACIN1Q9UKV3 1341 aaKnown RBP23.03■■□□□ 1.28
LRP4-201ENST00000378623 WDR43Q15061 677 aaKnown RBP eCLIP23.02■■□□□ 1.28
LRP4-201ENST00000378623 IRX6P78412 446 aaPredicted RBP23.01■■□□□ 1.27
LRP4-201ENST00000378623 DDX10Q13206 875 aaKnown RBP23.01■■□□□ 1.27
LRP4-201ENST00000378623 KDM2AQ9Y2K7 1162 aa23.01■■□□□ 1.27
LRP4-201ENST00000378623 TMC1Q8TDI8 760 aa23■■□□□ 1.27
LRP4-201ENST00000378623 NCBP3Q53F19 620 aaKnown RBP23■■□□□ 1.27
LRP4-201ENST00000378623 MYH16Q9H6N6 1097 aa22.98■■□□□ 1.27
LRP4-201ENST00000378623 TONSLQ96HA7 1378 aa22.98■■□□□ 1.27
LRP4-201ENST00000378623 HAP1P54257 671 aaPredicted RBP22.95■■□□□ 1.26
LRP4-201ENST00000378623 CHIC2Q9UKJ5 165 aa22.92■■□□□ 1.26
LRP4-201ENST00000378623 NCLP19338 710 aaKnown RBP22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms