RNA–Protein interactions for RNA: ENST00000378623.5

LRP4-201, Transcript of LDL receptor related protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP4, Length 8,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP4-201ENST00000378623 DCAF8L2P0C7V8 631 aa29.92■■■□□ 2.38
LRP4-201ENST00000378623 EHMT2Q96KQ7 1210 aa28.08■■■□□ 2.09
LRP4-201ENST00000378623 SUPT5HO00267 1087 aaKnown RBP27.87■■■□□ 2.05
LRP4-201ENST00000378623 PELP1Q8IZL8 1130 aaKnown RBP27.61■■■□□ 2.01
LRP4-201ENST00000378623 SHROOM4Q9ULL8 1493 aa27.21■■□□□ 1.95
LRP4-201ENST00000378623 TTBK1Q5TCY1 1321 aaPredicted RBP27.09■■□□□ 1.93
LRP4-201ENST00000378623 APLP2Q06481 763 aa27.01■■□□□ 1.91
LRP4-201ENST00000378623 ERICH6Q7L0X2 663 aa26.94■■□□□ 1.9
LRP4-201ENST00000378623 RANGAP1P46060 587 aaPredicted RBP26.67■■□□□ 1.86
LRP4-201ENST00000378623 FAM9AQ8IZU1 332 aaPredicted RBP26.62■■□□□ 1.85
LRP4-201ENST00000378623 ATP1B4Q9UN42 357 aaPredicted RBP26.49■■□□□ 1.83
LRP4-201ENST00000378623 PCGF6Q9BYE7 350 aa26.46■■□□□ 1.83
LRP4-201ENST00000378623 CCER1Q8TC90 406 aaPredicted RBP26.42■■□□□ 1.82
LRP4-201ENST00000378623 MYT1Q01538 1121 aa26.18■■□□□ 1.78
LRP4-201ENST00000378623 CENPBP07199 599 aaPredicted RBP26.11■■□□□ 1.77
LRP4-201ENST00000378623 YTHDC1Q96MU7 727 aaKnown RBP26.07■■□□□ 1.76
LRP4-201ENST00000378623 NEFLP07196 543 aa25.94■■□□□ 1.74
LRP4-201ENST00000378623 MYT1LQ9UL68 1186 aa25.74■■□□□ 1.71
LRP4-201ENST00000378623 CHIC1Q5VXU3 224 aa25.69■■□□□ 1.7
LRP4-201ENST00000378623 NISCHQ9Y2I1 1504 aa25.69■■□□□ 1.7
LRP4-201ENST00000378623 POLR3GLQ9BT43 218 aa25.67■■□□□ 1.7
LRP4-201ENST00000378623 UBTFP17480 764 aaKnown RBP25.65■■□□□ 1.7
LRP4-201ENST00000378623 DAXXQ9UER7 740 aaPredicted RBP25.65■■□□□ 1.7
LRP4-201ENST00000378623 CNGB1Q14028 1251 aaPredicted RBP25.6■■□□□ 1.69
LRP4-201ENST00000378623 PPARGC1BQ86YN6 1023 aaKnown RBP25.59■■□□□ 1.69
LRP4-201ENST00000378623 TRIM41Q8WV44 630 aa25.52■■□□□ 1.68
LRP4-201ENST00000378623 ZEB1P37275 1124 aaPredicted RBP25.5■■□□□ 1.67
LRP4-201ENST00000378623 SLC4A1APQ9BWU0 796 aaKnown RBP25.37■■□□□ 1.65
LRP4-201ENST00000378623 ITGAEP38570 1179 aa25.31■■□□□ 1.64
LRP4-201ENST00000378623 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.3■■□□□ 1.64
LRP4-201ENST00000378623 HNRNPUL2Q1KMD3 747 aaKnown RBP25.3■■□□□ 1.64
LRP4-201ENST00000378623 CLSPNQ9HAW4 1339 aa25.02■■□□□ 1.6
LRP4-201ENST00000378623 ZNF316A6NFI3 1004 aaPredicted RBP25.02■■□□□ 1.6
LRP4-201ENST00000378623 BCL11AQ9H165 835 aa24.81■■□□□ 1.56
LRP4-201ENST00000378623 RTL5Q5HYW3 569 aaPredicted RBP24.78■■□□□ 1.56
LRP4-201ENST00000378623 SLC24A1O60721 1099 aa24.72■■□□□ 1.55
LRP4-201ENST00000378623 TRIM26Q12899 539 aaPredicted RBP24.56■■□□□ 1.52
LRP4-201ENST00000378623 HRCP23327 699 aa24.51■■□□□ 1.51
LRP4-201ENST00000378623 ZBTB47Q9UFB7 747 aaPredicted RBP24.44■■□□□ 1.5
LRP4-201ENST00000378623 BCANQ96GW7 911 aa24.44■■□□□ 1.5
LRP4-201ENST00000378623 FAM50AQ14320 339 aaKnown RBP24.37■■□□□ 1.49
LRP4-201ENST00000378623 TRIM52Q96A61 297 aa24.36■■□□□ 1.49
LRP4-201ENST00000378623 LOC105371045A0A1W2PR82 267 aa24.32■■□□□ 1.48
LRP4-201ENST00000378623 NEUROD1Q13562 356 aa24.32■■□□□ 1.48
LRP4-201ENST00000378623 ZNF326Q5BKZ1 582 aaKnown RBP24.31■■□□□ 1.48
LRP4-201ENST00000378623 PLPPR3Q6T4P5 718 aa24.29■■□□□ 1.48
LRP4-201ENST00000378623 CANXP27824 592 aaKnown RBP24.22■■□□□ 1.47
LRP4-201ENST00000378623 FBLN2P98095 1184 aa24.21■■□□□ 1.47
LRP4-201ENST00000378623 DIEXFQ68CQ4 756 aaKnown RBP24.18■■□□□ 1.46
LRP4-201ENST00000378623 CDK11AQ9UQ88 783 aaPredicted RBP24.04■■□□□ 1.44
LRP4-201ENST00000378623 NPM2Q86SE8 214 aaKnown RBP23.96■■□□□ 1.43
LRP4-201ENST00000378623 NEFMP07197 916 aa23.94■■□□□ 1.42
LRP4-201ENST00000378623 ANP32CO43423 234 aa23.93■■□□□ 1.42
LRP4-201ENST00000378623 ARID3CA6NKF2 412 aa23.9■■□□□ 1.42
LRP4-201ENST00000378623 PABPN1Q86U42 306 aaKnown RBP eCLIP23.88■■□□□ 1.41
LRP4-201ENST00000378623 GTF3C3Q9Y5Q9 886 aa23.83■■□□□ 1.4
LRP4-201ENST00000378623 EIF5BO60841 1220 aaKnown RBP23.82■■□□□ 1.4
LRP4-201ENST00000378623 HSP90AA1P07900 732 aaKnown RBP23.74■■□□□ 1.39
LRP4-201ENST00000378623 ANP32AP39687 249 aaKnown RBP23.7■■□□□ 1.39
LRP4-201ENST00000378623 ANP32BQ92688 251 aaKnown RBP23.68■■□□□ 1.38
LRP4-201ENST00000378623 ESF1Q9H501 851 aaKnown RBP23.68■■□□□ 1.38
LRP4-201ENST00000378623 A0A0G2JS52 829 aa23.66■■□□□ 1.38
LRP4-201ENST00000378623 ARXQ96QS3 562 aa23.66■■□□□ 1.38
LRP4-201ENST00000378623 SCAF1Q9H7N4 1312 aaKnown RBP23.65■■□□□ 1.38
LRP4-201ENST00000378623 PLEKHG5O94827 1062 aa23.58■■□□□ 1.37
LRP4-201ENST00000378623 ZNF777Q9ULD5 760 aaPredicted RBP23.58■■□□□ 1.36
LRP4-201ENST00000378623 STAG3Q9UJ98 1225 aa23.57■■□□□ 1.36
LRP4-201ENST00000378623 CHGAP10645 457 aaKnown RBP23.56■■□□□ 1.36
LRP4-201ENST00000378623 P3H3Q8IVL6 736 aa23.56■■□□□ 1.36
LRP4-201ENST00000378623 SALL2Q9Y467 1007 aaPredicted RBP23.54■■□□□ 1.36
LRP4-201ENST00000378623 ABCC9O60706 1549 aa23.53■■□□□ 1.36
LRP4-201ENST00000378623 SENP3Q9H4L4 574 aaPredicted RBP23.47■■□□□ 1.35
LRP4-201ENST00000378623 NBR1Q14596 966 aa23.38■■□□□ 1.33
LRP4-201ENST00000378623 UPF2Q9HAU5 1272 aaKnown RBP23.38■■□□□ 1.33
LRP4-201ENST00000378623 CDK11BP21127 795 aaKnown RBP23.37■■□□□ 1.33
LRP4-201ENST00000378623 TULP1O00294 542 aaPredicted RBP23.36■■□□□ 1.33
LRP4-201ENST00000378623 ZBTB7CA1YPR0 619 aa23.33■■□□□ 1.32
LRP4-201ENST00000378623 FKBP8Q14318 412 aa23.3■■□□□ 1.32
LRP4-201ENST00000378623 FAM9BQ8IZU0 186 aa23.29■■□□□ 1.32
LRP4-201ENST00000378623 GLIPR1L2Q4G1C9 344 aa23.18■■□□□ 1.3
LRP4-201ENST00000378623 HNRNPUQ00839 825 aaKnown RBP eCLIP23.16■■□□□ 1.3
LRP4-201ENST00000378623 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.16■■□□□ 1.3
LRP4-201ENST00000378623 TPRNQ4KMQ1 711 aa23.16■■□□□ 1.3
LRP4-201ENST00000378623 NPM1P06748 294 aaKnown RBP eCLIP23.15■■□□□ 1.3
LRP4-201ENST00000378623 C14orf37Q86TY3 774 aa23.12■■□□□ 1.29
LRP4-201ENST00000378623 TAOK2Q9UL54 1235 aa23.04■■□□□ 1.28
LRP4-201ENST00000378623 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.04■■□□□ 1.28
LRP4-201ENST00000378623 CCDC136Q96JN2 1154 aa23.03■■□□□ 1.28
LRP4-201ENST00000378623 ACIN1Q9UKV3 1341 aaKnown RBP23.03■■□□□ 1.28
LRP4-201ENST00000378623 WDR43Q15061 677 aaKnown RBP eCLIP23.02■■□□□ 1.28
LRP4-201ENST00000378623 IRX6P78412 446 aaPredicted RBP23.01■■□□□ 1.27
LRP4-201ENST00000378623 DDX10Q13206 875 aaKnown RBP23.01■■□□□ 1.27
LRP4-201ENST00000378623 KDM2AQ9Y2K7 1162 aa23.01■■□□□ 1.27
LRP4-201ENST00000378623 TMC1Q8TDI8 760 aa23■■□□□ 1.27
LRP4-201ENST00000378623 NCBP3Q53F19 620 aaKnown RBP23■■□□□ 1.27
LRP4-201ENST00000378623 MYH16Q9H6N6 1097 aa22.98■■□□□ 1.27
LRP4-201ENST00000378623 TONSLQ96HA7 1378 aa22.98■■□□□ 1.27
LRP4-201ENST00000378623 HAP1P54257 671 aaPredicted RBP22.95■■□□□ 1.26
LRP4-201ENST00000378623 CHIC2Q9UKJ5 165 aa22.92■■□□□ 1.26
LRP4-201ENST00000378623 NCLP19338 710 aaKnown RBP22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms