RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 NISCHQ9Y2I1 1504 aa37.32■■■■□ 3.56
PTPRO-209ENST00000543886 CCDC180Q9P1Z9 1646 aa32.28■■■□□ 2.76
PTPRO-209ENST00000543886 ZCCHC6Q5VYS8 1495 aaKnown RBP31.45■■■□□ 2.63
PTPRO-209ENST00000543886 SHROOM4Q9ULL8 1493 aa30.96■■■□□ 2.55
PTPRO-209ENST00000543886 DCAF1Q9Y4B6 1507 aa30.79■■■□□ 2.52
PTPRO-209ENST00000543886 DCAF8L2P0C7V8 631 aa30.79■■■□□ 2.52
PTPRO-209ENST00000543886 MYO15BQ96JP2 1530 aa30.21■■■□□ 2.43
PTPRO-209ENST00000543886 ABCC9O60706 1549 aa30.14■■■□□ 2.42
PTPRO-209ENST00000543886 SUPT5HO00267 1087 aaKnown RBP30.03■■■□□ 2.4
PTPRO-209ENST00000543886 NACADO15069 1562 aa29.94■■■□□ 2.38
PTPRO-209ENST00000543886 SCRIBQ14160 1630 aa29.86■■■□□ 2.37
PTPRO-209ENST00000543886 RB1CC1Q8TDY2 1594 aa29.59■■■□□ 2.33
PTPRO-209ENST00000543886 RSF1Q96T23 1441 aaPredicted RBP29.17■■■□□ 2.26
PTPRO-209ENST00000543886 UNC13AQ9UPW8 1703 aa29.04■■■□□ 2.24
PTPRO-209ENST00000543886 CECR2Q9BXF3 1484 aa28.98■■■□□ 2.23
PTPRO-209ENST00000543886 CHIC1Q5VXU3 224 aa28.95■■■□□ 2.23
PTPRO-209ENST00000543886 MROH2BQ7Z745 1585 aa28.88■■■□□ 2.21
PTPRO-209ENST00000543886 BAZ1AQ9NRL2 1556 aaPredicted RBP28.78■■■□□ 2.2
PTPRO-209ENST00000543886 WIZO95785 1651 aa28.7■■■□□ 2.19
PTPRO-209ENST00000543886 BICRAQ9NZM4 1560 aa28.67■■■□□ 2.18
PTPRO-209ENST00000543886 SMARCA4P51532 1647 aa28.6■■■□□ 2.17
PTPRO-209ENST00000543886 PABPN1Q86U42 306 aaKnown RBP eCLIP28.55■■■□□ 2.16
PTPRO-209ENST00000543886 TOP2AP11388 1531 aaKnown RBP28.38■■■□□ 2.13
PTPRO-209ENST00000543886 PEG3Q9GZU2 1588 aa28.17■■■□□ 2.1
PTPRO-209ENST00000543886 TRIM41Q8WV44 630 aa28.17■■■□□ 2.1
PTPRO-209ENST00000543886 SMARCA2P51531 1590 aa28.14■■■□□ 2.1
PTPRO-209ENST00000543886 CCDC88BA6NC98 1476 aa28.11■■■□□ 2.09
PTPRO-209ENST00000543886 EIF4G1Q04637 1599 aaKnown RBP28.1■■■□□ 2.09
PTPRO-209ENST00000543886 ATAD2BQ9ULI0 1458 aa27.98■■■□□ 2.07
PTPRO-209ENST00000543886 LOC105371045A0A1W2PR82 267 aa27.92■■■□□ 2.06
PTPRO-209ENST00000543886 BAZ1BQ9UIG0 1483 aaKnown RBP27.89■■■□□ 2.06
PTPRO-209ENST00000543886 ABCC8Q09428 1581 aa27.74■■■□□ 2.03
PTPRO-209ENST00000543886 FAM9AQ8IZU1 332 aaPredicted RBP27.72■■■□□ 2.03
PTPRO-209ENST00000543886 HMGXB3Q12766 1538 aa27.64■■■□□ 2.02
PTPRO-209ENST00000543886 NCAPD3P42695 1498 aa27.61■■■□□ 2.01
PTPRO-209ENST00000543886 WRNQ14191 1432 aaPredicted RBP eCLIP27.46■■□□□ 1.99
PTPRO-209ENST00000543886 EHMT2Q96KQ7 1210 aa27.38■■□□□ 1.97
PTPRO-209ENST00000543886 SYNJ1O43426 1573 aa27.34■■□□□ 1.97
PTPRO-209ENST00000543886 EEA1Q15075 1411 aa27.32■■□□□ 1.96
PTPRO-209ENST00000543886 SOGA1O94964 1423 aa27.31■■□□□ 1.96
PTPRO-209ENST00000543886 CC2D2AQ9P2K1 1620 aa27.26■■□□□ 1.95
PTPRO-209ENST00000543886 PCGF6Q9BYE7 350 aa27.24■■□□□ 1.95
PTPRO-209ENST00000543886 RUSC2Q8N2Y8 1516 aa27.17■■□□□ 1.94
PTPRO-209ENST00000543886 CFTRP13569 1480 aa27.17■■□□□ 1.94
PTPRO-209ENST00000543886 TOP2BQ02880 1626 aa27.16■■□□□ 1.94
PTPRO-209ENST00000543886 CSRNP3Q8WYN3 585 aa27.14■■□□□ 1.94
PTPRO-209ENST00000543886 BIVM-ERCC5R4GMW8 1640 aa27.12■■□□□ 1.93
PTPRO-209ENST00000543886 PRDM2Q13029 1718 aa27.1■■□□□ 1.93
PTPRO-209ENST00000543886 TRIM26Q12899 539 aaPredicted RBP27.05■■□□□ 1.92
PTPRO-209ENST00000543886 GOLGA3Q08378 1498 aa27■■□□□ 1.91
PTPRO-209ENST00000543886 TNIKQ9UKE5 1360 aa26.99■■□□□ 1.91
PTPRO-209ENST00000543886 CADPSQ9ULU8 1353 aa26.97■■□□□ 1.91
PTPRO-209ENST00000543886 CUX1P39880 1505 aa26.97■■□□□ 1.91
PTPRO-209ENST00000543886 KIF21BO75037 1637 aa26.95■■□□□ 1.91
PTPRO-209ENST00000543886 CEP164Q9UPV0 1460 aa26.94■■□□□ 1.9
PTPRO-209ENST00000543886 CEP162Q5TB80 1403 aa26.93■■□□□ 1.9
PTPRO-209ENST00000543886 UBTFP17480 764 aaKnown RBP26.91■■□□□ 1.9
PTPRO-209ENST00000543886 HRCP23327 699 aa26.85■■□□□ 1.89
PTPRO-209ENST00000543886 RAPGEF2Q9Y4G8 1499 aa26.73■■□□□ 1.87
PTPRO-209ENST00000543886 KIF27Q86VH2 1401 aa26.72■■□□□ 1.87
PTPRO-209ENST00000543886 FANCD2Q9BXW9 1451 aa26.72■■□□□ 1.87
PTPRO-209ENST00000543886 ERICH3Q5RHP9 1530 aa26.66■■□□□ 1.86
PTPRO-209ENST00000543886 PRXQ9BXM0 1461 aa26.64■■□□□ 1.85
PTPRO-209ENST00000543886 PPARGC1BQ86YN6 1023 aaKnown RBP26.63■■□□□ 1.85
PTPRO-209ENST00000543886 NESP48681 1621 aa26.62■■□□□ 1.85
PTPRO-209ENST00000543886 LAMC3Q9Y6N6 1575 aa26.62■■□□□ 1.85
PTPRO-209ENST00000543886 FGD5Q6ZNL6 1462 aa26.6■■□□□ 1.85
PTPRO-209ENST00000543886 CLIP1P30622 1438 aa26.6■■□□□ 1.85
PTPRO-209ENST00000543886 DNMBPQ6XZF7 1577 aa26.56■■□□□ 1.84
PTPRO-209ENST00000543886 CUX2O14529 1486 aa26.55■■□□□ 1.84
PTPRO-209ENST00000543886 TOPBP1Q92547 1522 aa26.48■■□□□ 1.83
PTPRO-209ENST00000543886 DNAJC5BQ9UF47 199 aa26.48■■□□□ 1.83
PTPRO-209ENST00000543886 VPS8Q8N3P4 1428 aa26.43■■□□□ 1.82
PTPRO-209ENST00000543886 PDS5BQ9NTI5 1447 aa26.41■■□□□ 1.82
PTPRO-209ENST00000543886 IGF1RP08069 1367 aa26.4■■□□□ 1.82
PTPRO-209ENST00000543886 POLA1P09884 1462 aaPredicted RBP26.39■■□□□ 1.81
PTPRO-209ENST00000543886 RANGAP1P46060 587 aaPredicted RBP26.38■■□□□ 1.81
PTPRO-209ENST00000543886 TTBK1Q5TCY1 1321 aaPredicted RBP26.35■■□□□ 1.81
PTPRO-209ENST00000543886 ABCA10Q8WWZ4 1543 aa26.35■■□□□ 1.81
PTPRO-209ENST00000543886 URB2Q14146 1524 aaKnown RBP26.34■■□□□ 1.81
PTPRO-209ENST00000543886 RAD54L2Q9Y4B4 1467 aa26.33■■□□□ 1.81
PTPRO-209ENST00000543886 KIF21AQ7Z4S6 1674 aa26.31■■□□□ 1.8
PTPRO-209ENST00000543886 CARMIL1Q5VZK9 1371 aa26.3■■□□□ 1.8
PTPRO-209ENST00000543886 ARAP1Q96P48 1450 aa26.26■■□□□ 1.79
PTPRO-209ENST00000543886 ZEB1P37275 1124 aaPredicted RBP26.24■■□□□ 1.79
PTPRO-209ENST00000543886 APLP2Q06481 763 aa26.24■■□□□ 1.79
PTPRO-209ENST00000543886 WDR97A6NE52 1622 aa26.23■■□□□ 1.79
PTPRO-209ENST00000543886 CUL7Q14999 1698 aa26.17■■□□□ 1.78
PTPRO-209ENST00000543886 ARHGAP35Q9NRY4 1499 aa26.15■■□□□ 1.78
PTPRO-209ENST00000543886 ABCA5Q8WWZ7 1642 aa26.11■■□□□ 1.77
PTPRO-209ENST00000543886 MRC2Q9UBG0 1479 aa26.05■■□□□ 1.76
PTPRO-209ENST00000543886 GAPVD1Q14C86 1478 aa26.04■■□□□ 1.76
PTPRO-209ENST00000543886 TDRD9Q8NDG6 1382 aaKnown RBP26.03■■□□□ 1.76
PTPRO-209ENST00000543886 TARBP1Q13395 1621 aaKnown RBP26.02■■□□□ 1.76
PTPRO-209ENST00000543886 CTTNBP2Q8WZ74 1663 aa25.99■■□□□ 1.75
PTPRO-209ENST00000543886 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.97■■□□□ 1.75
PTPRO-209ENST00000543886 CCER1Q8TC90 406 aaPredicted RBP25.95■■□□□ 1.74
PTPRO-209ENST00000543886 EFCAB5A4FU69 1503 aa25.9■■□□□ 1.74
PTPRO-209ENST00000543886 WDR62O43379 1518 aa25.88■■□□□ 1.73
PTPRO-209ENST00000543886 PBRM1Q86U86 1689 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms