RNA–Protein interactions for RNA: ENST00000629289.2

CDK11B-208, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 5 BASIC

Gene CDK11B, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-208ENST00000629289 NISCHQ9Y2I1 1504 aa34.25■■■■□ 3.07
CDK11B-208ENST00000629289 PELP1Q8IZL8 1130 aaKnown RBP31.03■■■□□ 2.56
CDK11B-208ENST00000629289 MYT1Q01538 1121 aa30.43■■■□□ 2.46
CDK11B-208ENST00000629289 CCDC180Q9P1Z9 1646 aa30.08■■■□□ 2.41
CDK11B-208ENST00000629289 TTBK1Q5TCY1 1321 aaPredicted RBP29.2■■■□□ 2.26
CDK11B-208ENST00000629289 HRCP23327 699 aa29.15■■■□□ 2.26
CDK11B-208ENST00000629289 ABCC9O60706 1549 aa28.81■■■□□ 2.2
CDK11B-208ENST00000629289 ZCCHC6Q5VYS8 1495 aaKnown RBP28.69■■■□□ 2.18
CDK11B-208ENST00000629289 PRKCSHP14314 528 aaPredicted RBP28.66■■■□□ 2.18
CDK11B-208ENST00000629289 SCAF1Q9H7N4 1312 aaKnown RBP28.64■■■□□ 2.18
CDK11B-208ENST00000629289 PPARGC1BQ86YN6 1023 aaKnown RBP28.39■■■□□ 2.14
CDK11B-208ENST00000629289 DCAF8L2P0C7V8 631 aa28.33■■■□□ 2.13
CDK11B-208ENST00000629289 DCAF1Q9Y4B6 1507 aa28.33■■■□□ 2.13
CDK11B-208ENST00000629289 BCL11AQ9H165 835 aa28.17■■■□□ 2.1
CDK11B-208ENST00000629289 MYO15BQ96JP2 1530 aa28.16■■■□□ 2.1
CDK11B-208ENST00000629289 NACADO15069 1562 aa28.1■■■□□ 2.09
CDK11B-208ENST00000629289 SHROOM4Q9ULL8 1493 aa28.09■■■□□ 2.09
CDK11B-208ENST00000629289 RB1CC1Q8TDY2 1594 aa27.95■■■□□ 2.07
CDK11B-208ENST00000629289 ERICH6Q7L0X2 663 aa27.92■■■□□ 2.06
CDK11B-208ENST00000629289 FAM9AQ8IZU1 332 aaPredicted RBP27.88■■■□□ 2.05
CDK11B-208ENST00000629289 APLP2Q06481 763 aa27.87■■■□□ 2.05
CDK11B-208ENST00000629289 SUPT5HO00267 1087 aaKnown RBP27.8■■■□□ 2.04
CDK11B-208ENST00000629289 SCRIBQ14160 1630 aa27.58■■■□□ 2.01
CDK11B-208ENST00000629289 PCGF6Q9BYE7 350 aa27.52■■■□□ 2
CDK11B-208ENST00000629289 UNC13AQ9UPW8 1703 aa27.44■■□□□ 1.98
CDK11B-208ENST00000629289 CENPBP07199 599 aaPredicted RBP27.42■■□□□ 1.98
CDK11B-208ENST00000629289 ACIN1Q9UKV3 1341 aaKnown RBP27.34■■□□□ 1.97
CDK11B-208ENST00000629289 SLC24A1O60721 1099 aa27.23■■□□□ 1.95
CDK11B-208ENST00000629289 GTF3C3Q9Y5Q9 886 aa27.18■■□□□ 1.94
CDK11B-208ENST00000629289 BICRAQ9NZM4 1560 aa27.18■■□□□ 1.94
CDK11B-208ENST00000629289 NEUROD1Q13562 356 aa27.14■■□□□ 1.94
CDK11B-208ENST00000629289 CHIC1Q5VXU3 224 aa27.11■■□□□ 1.93
CDK11B-208ENST00000629289 PABPN1Q86U42 306 aaKnown RBP eCLIP27.06■■□□□ 1.92
CDK11B-208ENST00000629289 ANP32EQ9BTT0 268 aa26.87■■□□□ 1.89
CDK11B-208ENST00000629289 ZEB1P37275 1124 aaPredicted RBP26.78■■□□□ 1.88
CDK11B-208ENST00000629289 CECR2Q9BXF3 1484 aa26.66■■□□□ 1.86
CDK11B-208ENST00000629289 DNAJC5BQ9UF47 199 aa26.65■■□□□ 1.86
CDK11B-208ENST00000629289 CSRNP3Q8WYN3 585 aa26.64■■□□□ 1.85
CDK11B-208ENST00000629289 LOC105371045A0A1W2PR82 267 aa26.59■■□□□ 1.85
CDK11B-208ENST00000629289 BAZ1AQ9NRL2 1556 aaPredicted RBP26.46■■□□□ 1.83
CDK11B-208ENST00000629289 MROH2BQ7Z745 1585 aa26.46■■□□□ 1.83
CDK11B-208ENST00000629289 SMARCA4P51532 1647 aa26.43■■□□□ 1.82
CDK11B-208ENST00000629289 RSF1Q96T23 1441 aaPredicted RBP26.4■■□□□ 1.82
CDK11B-208ENST00000629289 EIF4G1Q04637 1599 aaKnown RBP26.36■■□□□ 1.81
CDK11B-208ENST00000629289 DAXXQ9UER7 740 aaPredicted RBP26.32■■□□□ 1.8
CDK11B-208ENST00000629289 EIF5BO60841 1220 aaKnown RBP26.25■■□□□ 1.79
CDK11B-208ENST00000629289 WIZO95785 1651 aa26.22■■□□□ 1.79
CDK11B-208ENST00000629289 ANO8Q9HCE9 1232 aaPredicted RBP26.2■■□□□ 1.78
CDK11B-208ENST00000629289 TRIM26Q12899 539 aaPredicted RBP26.17■■□□□ 1.78
CDK11B-208ENST00000629289 PEG3Q9GZU2 1588 aa26.14■■□□□ 1.78
CDK11B-208ENST00000629289 ATAD2BQ9ULI0 1458 aa26.09■■□□□ 1.77
CDK11B-208ENST00000629289 CC2D2AQ9P2K1 1620 aa26.08■■□□□ 1.77
CDK11B-208ENST00000629289 UBE2Q2Q8WVN8 375 aa26.06■■□□□ 1.76
CDK11B-208ENST00000629289 SMARCA2P51531 1590 aa26.05■■□□□ 1.76
CDK11B-208ENST00000629289 NCAPD3P42695 1498 aa25.95■■□□□ 1.74
CDK11B-208ENST00000629289 TOP2AP11388 1531 aaKnown RBP25.92■■□□□ 1.74
CDK11B-208ENST00000629289 BAZ1BQ9UIG0 1483 aaKnown RBP25.89■■□□□ 1.74
CDK11B-208ENST00000629289 HMGXB3Q12766 1538 aa25.88■■□□□ 1.73
CDK11B-208ENST00000629289 TSHZ2Q9NRE2 1034 aa25.86■■□□□ 1.73
CDK11B-208ENST00000629289 DIEXFQ68CQ4 756 aaKnown RBP25.79■■□□□ 1.72
CDK11B-208ENST00000629289 PLEKHG5O94827 1062 aa25.79■■□□□ 1.72
CDK11B-208ENST00000629289 EHMT2Q96KQ7 1210 aa25.76■■□□□ 1.71
CDK11B-208ENST00000629289 CCDC88BA6NC98 1476 aa25.64■■□□□ 1.7
CDK11B-208ENST00000629289 TRIM41Q8WV44 630 aa25.64■■□□□ 1.69
CDK11B-208ENST00000629289 SALL2Q9Y467 1007 aaPredicted RBP25.63■■□□□ 1.69
CDK11B-208ENST00000629289 YTHDC1Q96MU7 727 aaKnown RBP25.53■■□□□ 1.68
CDK11B-208ENST00000629289 CCDC136Q96JN2 1154 aa25.52■■□□□ 1.68
CDK11B-208ENST00000629289 PKNOX2Q96KN3 472 aa25.46■■□□□ 1.67
CDK11B-208ENST00000629289 SUPT16HQ9Y5B9 1047 aaKnown RBP25.43■■□□□ 1.66
CDK11B-208ENST00000629289 PODXL2Q9NZ53 605 aa25.42■■□□□ 1.66
CDK11B-208ENST00000629289 CLSPNQ9HAW4 1339 aa25.34■■□□□ 1.65
CDK11B-208ENST00000629289 ERICH6BQ5W0A0 696 aa25.31■■□□□ 1.64
CDK11B-208ENST00000629289 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.27■■□□□ 1.64
CDK11B-208ENST00000629289 CFTRP13569 1480 aa25.25■■□□□ 1.63
CDK11B-208ENST00000629289 CADPSQ9ULU8 1353 aa25.23■■□□□ 1.63
CDK11B-208ENST00000629289 NESP48681 1621 aa25.18■■□□□ 1.62
CDK11B-208ENST00000629289 MYT1LQ9UL68 1186 aa25.18■■□□□ 1.62
CDK11B-208ENST00000629289 DEKP35659 375 aaKnown RBP25.15■■□□□ 1.62
CDK11B-208ENST00000629289 LAMC3Q9Y6N6 1575 aa25.13■■□□□ 1.61
CDK11B-208ENST00000629289 CCER1Q8TC90 406 aaPredicted RBP25.11■■□□□ 1.61
CDK11B-208ENST00000629289 PRDM2Q13029 1718 aa25.11■■□□□ 1.61
CDK11B-208ENST00000629289 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.07■■□□□ 1.6
CDK11B-208ENST00000629289 MSH5O43196 834 aa25.06■■□□□ 1.6
CDK11B-208ENST00000629289 RBM19Q9Y4C8 960 aaKnown RBP25.05■■□□□ 1.6
CDK11B-208ENST00000629289 ABCC8Q09428 1581 aa24.97■■□□□ 1.59
CDK11B-208ENST00000629289 FANCD2Q9BXW9 1451 aa24.95■■□□□ 1.58
CDK11B-208ENST00000629289 MIER1Q8N108 512 aa24.94■■□□□ 1.58
CDK11B-208ENST00000629289 PDS5BQ9NTI5 1447 aa24.91■■□□□ 1.58
CDK11B-208ENST00000629289 DNAJC5Q9H3Z4 198 aa24.91■■□□□ 1.58
CDK11B-208ENST00000629289 KIF21AQ7Z4S6 1674 aa24.88■■□□□ 1.57
CDK11B-208ENST00000629289 WRNQ14191 1432 aaPredicted RBP eCLIP24.83■■□□□ 1.57
CDK11B-208ENST00000629289 ZNF316A6NFI3 1004 aaPredicted RBP24.83■■□□□ 1.57
CDK11B-208ENST00000629289 CEP164Q9UPV0 1460 aa24.83■■□□□ 1.57
CDK11B-208ENST00000629289 SYNJ1O43426 1573 aa24.79■■□□□ 1.56
CDK11B-208ENST00000629289 CUX1P39880 1505 aa24.77■■□□□ 1.56
CDK11B-208ENST00000629289 CUX2O14529 1486 aa24.72■■□□□ 1.55
CDK11B-208ENST00000629289 TOP2BQ02880 1626 aa24.71■■□□□ 1.55
CDK11B-208ENST00000629289 BIVM-ERCC5R4GMW8 1640 aa24.7■■□□□ 1.55
CDK11B-208ENST00000629289 ERCC6Q03468 1493 aa24.7■■□□□ 1.54
CDK11B-208ENST00000629289 URB2Q14146 1524 aaKnown RBP24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms