Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.47□□□□□ -0.09
GFI1Q99684 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC14.47□□□□□ -0.09
GFI1Q99684 NTF6B-201ENST00000591913 560 ntBASIC14.47□□□□□ -0.09
GFI1Q99684 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.47□□□□□ -0.09
GFI1Q99684 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.47□□□□□ -0.09
GFI1Q99684 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.47□□□□□ -0.09
GFI1Q99684 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
GFI1Q99684 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GFI1Q99684 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
GFI1Q99684 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.47□□□□□ -0.09
GFI1Q99684 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GFI1Q99684 PPT1-215ENST00000641471 2368 ntBASIC14.47□□□□□ -0.09
GFI1Q99684 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GFI1Q99684 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.47□□□□□ -0.09
GFI1Q99684 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.47□□□□□ -0.09
GFI1Q99684 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GFI1Q99684 TOP3BP1-201ENST00000420768 1380 ntBASIC14.47□□□□□ -0.09
GFI1Q99684 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GFI1Q99684 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.46□□□□□ -0.09
GFI1Q99684 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
GFI1Q99684 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GFI1Q99684 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.46□□□□□ -0.09
GFI1Q99684 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.46□□□□□ -0.09
GFI1Q99684 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.46□□□□□ -0.09
GFI1Q99684 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.46□□□□□ -0.09
GFI1Q99684 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
GFI1Q99684 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
GFI1Q99684 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GFI1Q99684 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.46□□□□□ -0.09
GFI1Q99684 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
GFI1Q99684 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GFI1Q99684 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
GFI1Q99684 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GFI1Q99684 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
GFI1Q99684 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GFI1Q99684 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.46□□□□□ -0.09
GFI1Q99684 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GFI1Q99684 VENTXP7-201ENST00000475503 772 ntBASIC14.46□□□□□ -0.09
GFI1Q99684 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.46□□□□□ -0.09
GFI1Q99684 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC14.46□□□□□ -0.09
GFI1Q99684 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.46□□□□□ -0.09
GFI1Q99684 AL353135.1-201ENST00000606729 504 ntBASIC14.46□□□□□ -0.09
GFI1Q99684 AC073592.4-201ENST00000623827 446 ntBASIC14.46□□□□□ -0.09
GFI1Q99684 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
GFI1Q99684 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GFI1Q99684 KRT8P39-201ENST00000396270 1433 ntBASIC14.46□□□□□ -0.09
GFI1Q99684 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GFI1Q99684 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GFI1Q99684 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
GFI1Q99684 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.46□□□□□ -0.09
GFI1Q99684 TNRC18P2-201ENST00000417666 2714 ntBASIC14.46□□□□□ -0.09
GFI1Q99684 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
GFI1Q99684 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
GFI1Q99684 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
GFI1Q99684 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.46□□□□□ -0.1
GFI1Q99684 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.46□□□□□ -0.1
GFI1Q99684 AC233702.3-201ENST00000578656 1387 ntBASIC14.46□□□□□ -0.1
GFI1Q99684 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
GFI1Q99684 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.46□□□□□ -0.1
GFI1Q99684 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
GFI1Q99684 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GFI1Q99684 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GFI1Q99684 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GFI1Q99684 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC14.45□□□□□ -0.1
GFI1Q99684 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.45□□□□□ -0.1
GFI1Q99684 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GFI1Q99684 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
GFI1Q99684 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
GFI1Q99684 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GFI1Q99684 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.45□□□□□ -0.1
GFI1Q99684 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GFI1Q99684 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GFI1Q99684 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
GFI1Q99684 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GFI1Q99684 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GFI1Q99684 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GFI1Q99684 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GFI1Q99684 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GFI1Q99684 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GFI1Q99684 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GFI1Q99684 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.45□□□□□ -0.1
GFI1Q99684 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GFI1Q99684 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.45□□□□□ -0.1
GFI1Q99684 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GFI1Q99684 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GFI1Q99684 AC022616.7-201ENST00000525383 220 ntBASIC14.45□□□□□ -0.1
GFI1Q99684 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.45□□□□□ -0.1
GFI1Q99684 AL136038.3-201ENST00000561909 1096 ntBASIC14.45□□□□□ -0.1
GFI1Q99684 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.45□□□□□ -0.1
GFI1Q99684 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.45□□□□□ -0.1
GFI1Q99684 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
GFI1Q99684 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
GFI1Q99684 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GFI1Q99684 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GFI1Q99684 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.45□□□□□ -0.1
GFI1Q99684 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GFI1Q99684 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GFI1Q99684 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GFI1Q99684 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GFI1Q99684 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms