RNA–Protein interactions for RNA: ENST00000310118.8

PSMD2-201, Transcript of proteasome 26S subunit, non-ATPase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMD2, Length 3,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD2-201ENST00000310118 NISCHQ9Y2I1 1504 aa30.39■■■□□ 2.46
PSMD2-201ENST00000310118 SHROOM4Q9ULL8 1493 aa27.55■■■□□ 2
PSMD2-201ENST00000310118 DCAF8L2P0C7V8 631 aa27.37■■□□□ 1.97
PSMD2-201ENST00000310118 SUPT5HO00267 1087 aaKnown RBP27.15■■□□□ 1.94
PSMD2-201ENST00000310118 PPARGC1BQ86YN6 1023 aaKnown RBP26.57■■□□□ 1.84
PSMD2-201ENST00000310118 HRCP23327 699 aa26.53■■□□□ 1.84
PSMD2-201ENST00000310118 PCGF6Q9BYE7 350 aa26.53■■□□□ 1.84
PSMD2-201ENST00000310118 PELP1Q8IZL8 1130 aaKnown RBP26.2■■□□□ 1.78
PSMD2-201ENST00000310118 MYO15BQ96JP2 1530 aa25.99■■□□□ 1.75
PSMD2-201ENST00000310118 CHIC1Q5VXU3 224 aa25.91■■□□□ 1.74
PSMD2-201ENST00000310118 EHMT2Q96KQ7 1210 aa25.72■■□□□ 1.71
PSMD2-201ENST00000310118 LOC105371045A0A1W2PR82 267 aa25.65■■□□□ 1.7
PSMD2-201ENST00000310118 ZCCHC6Q5VYS8 1495 aaKnown RBP25.52■■□□□ 1.68
PSMD2-201ENST00000310118 SCAF1Q9H7N4 1312 aaKnown RBP25.47■■□□□ 1.67
PSMD2-201ENST00000310118 FAM9AQ8IZU1 332 aaPredicted RBP25.36■■□□□ 1.65
PSMD2-201ENST00000310118 MYT1Q01538 1121 aa25.24■■□□□ 1.63
PSMD2-201ENST00000310118 TRIM26Q12899 539 aaPredicted RBP25.12■■□□□ 1.61
PSMD2-201ENST00000310118 CCDC180Q9P1Z9 1646 aa25.1■■□□□ 1.61
PSMD2-201ENST00000310118 DCAF1Q9Y4B6 1507 aa24.97■■□□□ 1.59
PSMD2-201ENST00000310118 GTF3C3Q9Y5Q9 886 aa24.93■■□□□ 1.58
PSMD2-201ENST00000310118 TRIM41Q8WV44 630 aa24.88■■□□□ 1.57
PSMD2-201ENST00000310118 ZEB1P37275 1124 aaPredicted RBP24.86■■□□□ 1.57
PSMD2-201ENST00000310118 ABCC9O60706 1549 aa24.84■■□□□ 1.57
PSMD2-201ENST00000310118 NEUROD1Q13562 356 aa24.79■■□□□ 1.56
PSMD2-201ENST00000310118 YTHDC1Q96MU7 727 aaKnown RBP24.78■■□□□ 1.56
PSMD2-201ENST00000310118 CENPBP07199 599 aaPredicted RBP24.77■■□□□ 1.56
PSMD2-201ENST00000310118 TTBK1Q5TCY1 1321 aaPredicted RBP24.76■■□□□ 1.55
PSMD2-201ENST00000310118 ACIN1Q9UKV3 1341 aaKnown RBP24.75■■□□□ 1.55
PSMD2-201ENST00000310118 SCRIBQ14160 1630 aa24.68■■□□□ 1.54
PSMD2-201ENST00000310118 CCER1Q8TC90 406 aaPredicted RBP24.51■■□□□ 1.51
PSMD2-201ENST00000310118 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.5■■□□□ 1.51
PSMD2-201ENST00000310118 DIEXFQ68CQ4 756 aaKnown RBP24.39■■□□□ 1.5
PSMD2-201ENST00000310118 RSF1Q96T23 1441 aaPredicted RBP24.35■■□□□ 1.49
PSMD2-201ENST00000310118 PABPN1Q86U42 306 aaKnown RBP eCLIP24.28■■□□□ 1.483e-6■■■■□ 23.3
PSMD2-201ENST00000310118 RANGAP1P46060 587 aaPredicted RBP24.23■■□□□ 1.47
PSMD2-201ENST00000310118 CECR2Q9BXF3 1484 aa24.21■■□□□ 1.47
PSMD2-201ENST00000310118 RB1CC1Q8TDY2 1594 aa24.08■■□□□ 1.44
PSMD2-201ENST00000310118 UBTFP17480 764 aaKnown RBP23.97■■□□□ 1.43
PSMD2-201ENST00000310118 BCL11AQ9H165 835 aa23.93■■□□□ 1.42
PSMD2-201ENST00000310118 MROH2BQ7Z745 1585 aa23.9■■□□□ 1.42
PSMD2-201ENST00000310118 WIZO95785 1651 aa23.74■■□□□ 1.39
PSMD2-201ENST00000310118 BCANQ96GW7 911 aa23.65■■□□□ 1.38
PSMD2-201ENST00000310118 MIER1Q8N108 512 aa23.65■■□□□ 1.38
PSMD2-201ENST00000310118 ZNF316A6NFI3 1004 aaPredicted RBP23.61■■□□□ 1.37
PSMD2-201ENST00000310118 NACADO15069 1562 aa23.61■■□□□ 1.37
PSMD2-201ENST00000310118 HNRNPUL2Q1KMD3 747 aaKnown RBP23.59■■□□□ 1.37
PSMD2-201ENST00000310118 ANP32EQ9BTT0 268 aa23.56■■□□□ 1.36
PSMD2-201ENST00000310118 ABCC8Q09428 1581 aa23.54■■□□□ 1.36
PSMD2-201ENST00000310118 CSRNP3Q8WYN3 585 aa23.49■■□□□ 1.35
PSMD2-201ENST00000310118 SOGA1O94964 1423 aa23.44■■□□□ 1.34
PSMD2-201ENST00000310118 CCDC88BA6NC98 1476 aa23.43■■□□□ 1.34
PSMD2-201ENST00000310118 APLP2Q06481 763 aa23.4■■□□□ 1.34
PSMD2-201ENST00000310118 ERICH6Q7L0X2 663 aa23.36■■□□□ 1.33
PSMD2-201ENST00000310118 RUSC2Q8N2Y8 1516 aa23.31■■□□□ 1.32
PSMD2-201ENST00000310118 BAZ1AQ9NRL2 1556 aaPredicted RBP23.29■■□□□ 1.32
PSMD2-201ENST00000310118 CEP162Q5TB80 1403 aa23.29■■□□□ 1.32
PSMD2-201ENST00000310118 SUPT16HQ9Y5B9 1047 aaKnown RBP23.29■■□□□ 1.32
PSMD2-201ENST00000310118 TSHZ2Q9NRE2 1034 aa23.25■■□□□ 1.31
PSMD2-201ENST00000310118 ITGAEP38570 1179 aa23.25■■□□□ 1.31
PSMD2-201ENST00000310118 ATP1B4Q9UN42 357 aaPredicted RBP23.17■■□□□ 1.3
PSMD2-201ENST00000310118 NEFLP07196 543 aa23.07■■□□□ 1.28
PSMD2-201ENST00000310118 PRKCSHP14314 528 aaPredicted RBP23.07■■□□□ 1.28
PSMD2-201ENST00000310118 FKBP8Q14318 412 aa23.06■■□□□ 1.28
PSMD2-201ENST00000310118 SMARCA4P51532 1647 aa23.05■■□□□ 1.28
PSMD2-201ENST00000310118 WRNQ14191 1432 aaPredicted RBP eCLIP23.03■■□□□ 1.28
PSMD2-201ENST00000310118 TOP2AP11388 1531 aaKnown RBP23.02■■□□□ 1.28
PSMD2-201ENST00000310118 SMARCA2P51531 1590 aa22.98■■□□□ 1.27
PSMD2-201ENST00000310118 TNIKQ9UKE5 1360 aa22.97■■□□□ 1.27
PSMD2-201ENST00000310118 P3H3Q8IVL6 736 aa22.92■■□□□ 1.26
PSMD2-201ENST00000310118 KCNH8Q96L42 1107 aa22.88■■□□□ 1.25
PSMD2-201ENST00000310118 CLIP1P30622 1438 aa22.86■■□□□ 1.25
PSMD2-201ENST00000310118 BAZ1BQ9UIG0 1483 aaKnown RBP22.85■■□□□ 1.25
PSMD2-201ENST00000310118 RBM19Q9Y4C8 960 aaKnown RBP22.83■■□□□ 1.25
PSMD2-201ENST00000310118 GOLGA3Q08378 1498 aa22.81■■□□□ 1.24
PSMD2-201ENST00000310118 UNC13AQ9UPW8 1703 aa22.76■■□□□ 1.23
PSMD2-201ENST00000310118 RAPGEF2Q9Y4G8 1499 aa22.72■■□□□ 1.23
PSMD2-201ENST00000310118 EIF4G1Q04637 1599 aaKnown RBP22.72■■□□□ 1.23
PSMD2-201ENST00000310118 KANK4Q5T7N3 995 aaPredicted RBP22.72■■□□□ 1.23
PSMD2-201ENST00000310118 ATAD2BQ9ULI0 1458 aa22.71■■□□□ 1.23
PSMD2-201ENST00000310118 CLSPNQ9HAW4 1339 aa22.71■■□□□ 1.23
PSMD2-201ENST00000310118 TRIM52Q96A61 297 aa22.7■■□□□ 1.22
PSMD2-201ENST00000310118 NBR1Q14596 966 aa22.69■■□□□ 1.22
PSMD2-201ENST00000310118 BICRAQ9NZM4 1560 aa22.67■■□□□ 1.22
PSMD2-201ENST00000310118 IRX6P78412 446 aaPredicted RBP22.67■■□□□ 1.22
PSMD2-201ENST00000310118 FAM50AQ14320 339 aaKnown RBP22.64■■□□□ 1.21
PSMD2-201ENST00000310118 SYNJ1O43426 1573 aa22.63■■□□□ 1.21
PSMD2-201ENST00000310118 EEA1Q15075 1411 aa22.63■■□□□ 1.21
PSMD2-201ENST00000310118 CEP164Q9UPV0 1460 aa22.62■■□□□ 1.21
PSMD2-201ENST00000310118 HIRIP3Q9BW71 556 aaPredicted RBP22.61■■□□□ 1.21
PSMD2-201ENST00000310118 ANO8Q9HCE9 1232 aaPredicted RBP22.59■■□□□ 1.21
PSMD2-201ENST00000310118 RTN4Q9NQC3 1192 aaKnown RBP22.59■■□□□ 1.21
PSMD2-201ENST00000310118 DHX57Q6P158 1386 aaKnown RBP22.57■■□□□ 1.2
PSMD2-201ENST00000310118 CCDC136Q96JN2 1154 aa22.57■■□□□ 1.2
PSMD2-201ENST00000310118 DDX10Q13206 875 aaKnown RBP22.56■■□□□ 1.2
PSMD2-201ENST00000310118 CDK11AQ9UQ88 783 aaPredicted RBP22.55■■□□□ 1.2
PSMD2-201ENST00000310118 DEKP35659 375 aaKnown RBP22.54■■□□□ 1.2
PSMD2-201ENST00000310118 ARID3CA6NKF2 412 aa22.53■■□□□ 1.2
PSMD2-201ENST00000310118 VPS8Q8N3P4 1428 aa22.53■■□□□ 1.2
PSMD2-201ENST00000310118 MSH5O43196 834 aa22.43■■□□□ 1.18
PSMD2-201ENST00000310118 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms