RNA–Protein interactions for RNA: ENST00000532097.5

PSMD13-212, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMD13, Length 1,991 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-212ENST00000532097 NISCHQ9Y2I1 1504 aa36.44■■■■□ 3.42
PSMD13-212ENST00000532097 CCDC180Q9P1Z9 1646 aa31.67■■■□□ 2.66
PSMD13-212ENST00000532097 ZCCHC6Q5VYS8 1495 aaKnown RBP30.69■■■□□ 2.5
PSMD13-212ENST00000532097 DCAF1Q9Y4B6 1507 aa30.07■■■□□ 2.4
PSMD13-212ENST00000532097 SHROOM4Q9ULL8 1493 aa29.99■■■□□ 2.39
PSMD13-212ENST00000532097 DCAF8L2P0C7V8 631 aa29.98■■■□□ 2.39
PSMD13-212ENST00000532097 ABCC9O60706 1549 aa29.77■■■□□ 2.36
PSMD13-212ENST00000532097 MYO15BQ96JP2 1530 aa29.59■■■□□ 2.33
PSMD13-212ENST00000532097 NACADO15069 1562 aa29.38■■■□□ 2.29
PSMD13-212ENST00000532097 SCRIBQ14160 1630 aa29.25■■■□□ 2.27
PSMD13-212ENST00000532097 RB1CC1Q8TDY2 1594 aa29.09■■■□□ 2.25
PSMD13-212ENST00000532097 SUPT5HO00267 1087 aaKnown RBP28.9■■■□□ 2.22
PSMD13-212ENST00000532097 UNC13AQ9UPW8 1703 aa28.69■■■□□ 2.18
PSMD13-212ENST00000532097 RSF1Q96T23 1441 aaPredicted RBP28.37■■■□□ 2.13
PSMD13-212ENST00000532097 CECR2Q9BXF3 1484 aa28.36■■■□□ 2.13
PSMD13-212ENST00000532097 BICRAQ9NZM4 1560 aa28.31■■■□□ 2.12
PSMD13-212ENST00000532097 MROH2BQ7Z745 1585 aa28.22■■■□□ 2.11
PSMD13-212ENST00000532097 PABPN1Q86U42 306 aaKnown RBP eCLIP28.1■■■□□ 2.09
PSMD13-212ENST00000532097 BAZ1AQ9NRL2 1556 aaPredicted RBP28.1■■■□□ 2.09
PSMD13-212ENST00000532097 WIZO95785 1651 aa28.05■■■□□ 2.08
PSMD13-212ENST00000532097 SMARCA4P51532 1647 aa28.01■■■□□ 2.07
PSMD13-212ENST00000532097 CHIC1Q5VXU3 224 aa27.78■■■□□ 2.04
PSMD13-212ENST00000532097 TOP2AP11388 1531 aaKnown RBP27.68■■■□□ 2.02
PSMD13-212ENST00000532097 PEG3Q9GZU2 1588 aa27.61■■■□□ 2.01
PSMD13-212ENST00000532097 SMARCA2P51531 1590 aa27.47■■□□□ 1.99
PSMD13-212ENST00000532097 ATAD2BQ9ULI0 1458 aa27.44■■□□□ 1.98
PSMD13-212ENST00000532097 EIF4G1Q04637 1599 aaKnown RBP27.42■■□□□ 1.98
PSMD13-212ENST00000532097 CCDC88BA6NC98 1476 aa27.41■■□□□ 1.98
PSMD13-212ENST00000532097 BAZ1BQ9UIG0 1483 aaKnown RBP27.29■■□□□ 1.96
PSMD13-212ENST00000532097 HMGXB3Q12766 1538 aa27.14■■□□□ 1.93
PSMD13-212ENST00000532097 NCAPD3P42695 1498 aa27.11■■□□□ 1.93
PSMD13-212ENST00000532097 TRIM41Q8WV44 630 aa27.08■■□□□ 1.93
PSMD13-212ENST00000532097 ABCC8Q09428 1581 aa27■■□□□ 1.91
PSMD13-212ENST00000532097 CC2D2AQ9P2K1 1620 aa26.95■■□□□ 1.9
PSMD13-212ENST00000532097 LOC105371045A0A1W2PR82 267 aa26.77■■□□□ 1.88
PSMD13-212ENST00000532097 FAM9AQ8IZU1 332 aaPredicted RBP26.69■■□□□ 1.86
PSMD13-212ENST00000532097 WRNQ14191 1432 aaPredicted RBP eCLIP26.68■■□□□ 1.86
PSMD13-212ENST00000532097 SYNJ1O43426 1573 aa26.66■■□□□ 1.86
PSMD13-212ENST00000532097 CFTRP13569 1480 aa26.61■■□□□ 1.85
PSMD13-212ENST00000532097 PRDM2Q13029 1718 aa26.58■■□□□ 1.85
PSMD13-212ENST00000532097 SOGA1O94964 1423 aa26.49■■□□□ 1.83
PSMD13-212ENST00000532097 TOP2BQ02880 1626 aa26.48■■□□□ 1.83
PSMD13-212ENST00000532097 BIVM-ERCC5R4GMW8 1640 aa26.47■■□□□ 1.83
PSMD13-212ENST00000532097 CADPSQ9ULU8 1353 aa26.43■■□□□ 1.82
PSMD13-212ENST00000532097 RUSC2Q8N2Y8 1516 aa26.41■■□□□ 1.82
PSMD13-212ENST00000532097 EHMT2Q96KQ7 1210 aa26.38■■□□□ 1.81
PSMD13-212ENST00000532097 CUX1P39880 1505 aa26.37■■□□□ 1.81
PSMD13-212ENST00000532097 EEA1Q15075 1411 aa26.35■■□□□ 1.81
PSMD13-212ENST00000532097 NESP48681 1621 aa26.26■■□□□ 1.79
PSMD13-212ENST00000532097 DNAJC5BQ9UF47 199 aa26.25■■□□□ 1.79
PSMD13-212ENST00000532097 CSRNP3Q8WYN3 585 aa26.2■■□□□ 1.78
PSMD13-212ENST00000532097 FANCD2Q9BXW9 1451 aa26.19■■□□□ 1.78
PSMD13-212ENST00000532097 LAMC3Q9Y6N6 1575 aa26.18■■□□□ 1.78
PSMD13-212ENST00000532097 KIF21BO75037 1637 aa26.11■■□□□ 1.77
PSMD13-212ENST00000532097 GOLGA3Q08378 1498 aa26.08■■□□□ 1.77
PSMD13-212ENST00000532097 CEP164Q9UPV0 1460 aa26.04■■□□□ 1.76
PSMD13-212ENST00000532097 FGD5Q6ZNL6 1462 aa26.02■■□□□ 1.76
PSMD13-212ENST00000532097 DNMBPQ6XZF7 1577 aa26.02■■□□□ 1.76
PSMD13-212ENST00000532097 TNIKQ9UKE5 1360 aa26■■□□□ 1.75
PSMD13-212ENST00000532097 KIF21AQ7Z4S6 1674 aa25.97■■□□□ 1.75
PSMD13-212ENST00000532097 TOPBP1Q92547 1522 aa25.96■■□□□ 1.75
PSMD13-212ENST00000532097 CEP162Q5TB80 1403 aa25.95■■□□□ 1.75
PSMD13-212ENST00000532097 KIF27Q86VH2 1401 aa25.94■■□□□ 1.74
PSMD13-212ENST00000532097 RAPGEF2Q9Y4G8 1499 aa25.94■■□□□ 1.74
PSMD13-212ENST00000532097 PDS5BQ9NTI5 1447 aa25.91■■□□□ 1.74
PSMD13-212ENST00000532097 URB2Q14146 1524 aaKnown RBP25.9■■□□□ 1.74
PSMD13-212ENST00000532097 UBTFP17480 764 aaKnown RBP25.9■■□□□ 1.74
PSMD13-212ENST00000532097 CUX2O14529 1486 aa25.88■■□□□ 1.73
PSMD13-212ENST00000532097 PRXQ9BXM0 1461 aa25.88■■□□□ 1.73
PSMD13-212ENST00000532097 POLA1P09884 1462 aaPredicted RBP25.86■■□□□ 1.73
PSMD13-212ENST00000532097 ERICH3Q5RHP9 1530 aa25.85■■□□□ 1.73
PSMD13-212ENST00000532097 RAD54L2Q9Y4B4 1467 aa25.8■■□□□ 1.72
PSMD13-212ENST00000532097 PCGF6Q9BYE7 350 aa25.78■■□□□ 1.72
PSMD13-212ENST00000532097 WDR97A6NE52 1622 aa25.76■■□□□ 1.71
PSMD13-212ENST00000532097 ABCA10Q8WWZ4 1543 aa25.76■■□□□ 1.71
PSMD13-212ENST00000532097 IGF1RP08069 1367 aa25.7■■□□□ 1.71
PSMD13-212ENST00000532097 CLIP1P30622 1438 aa25.67■■□□□ 1.7
PSMD13-212ENST00000532097 TRIM26Q12899 539 aaPredicted RBP25.64■■□□□ 1.69
PSMD13-212ENST00000532097 MRC2Q9UBG0 1479 aa25.63■■□□□ 1.69
PSMD13-212ENST00000532097 ABCA5Q8WWZ7 1642 aa25.59■■□□□ 1.69
PSMD13-212ENST00000532097 TARBP1Q13395 1621 aaKnown RBP25.58■■□□□ 1.69
PSMD13-212ENST00000532097 CARMIL1Q5VZK9 1371 aa25.57■■□□□ 1.68
PSMD13-212ENST00000532097 PPARGC1BQ86YN6 1023 aaKnown RBP25.55■■□□□ 1.68
PSMD13-212ENST00000532097 CUL7Q14999 1698 aa25.53■■□□□ 1.68
PSMD13-212ENST00000532097 WDR62O43379 1518 aa25.51■■□□□ 1.67
PSMD13-212ENST00000532097 RANGAP1P46060 587 aaPredicted RBP25.51■■□□□ 1.67
PSMD13-212ENST00000532097 TDRD9Q8NDG6 1382 aaKnown RBP25.48■■□□□ 1.67
PSMD13-212ENST00000532097 VPS8Q8N3P4 1428 aa25.48■■□□□ 1.67
PSMD13-212ENST00000532097 GAPVD1Q14C86 1478 aa25.46■■□□□ 1.67
PSMD13-212ENST00000532097 ARAP1Q96P48 1450 aa25.46■■□□□ 1.67
PSMD13-212ENST00000532097 THOC2Q8NI27 1593 aaKnown RBP25.45■■□□□ 1.66
PSMD13-212ENST00000532097 ERCC6Q03468 1493 aa25.44■■□□□ 1.66
PSMD13-212ENST00000532097 PBRM1Q86U86 1689 aa25.41■■□□□ 1.66
PSMD13-212ENST00000532097 ARHGAP35Q9NRY4 1499 aa25.38■■□□□ 1.65
PSMD13-212ENST00000532097 CTTNBP2Q8WZ74 1663 aa25.35■■□□□ 1.65
PSMD13-212ENST00000532097 IFT140Q96RY7 1462 aa25.32■■□□□ 1.64
PSMD13-212ENST00000532097 TTBK1Q5TCY1 1321 aaPredicted RBP25.31■■□□□ 1.64
PSMD13-212ENST00000532097 AQRO60306 1485 aaKnown RBP eCLIP25.3■■□□□ 1.642e-6■■■■□ 24.1
PSMD13-212ENST00000532097 ZNF608Q9ULD9 1512 aaPredicted RBP25.28■■□□□ 1.64
PSMD13-212ENST00000532097 ADAMTS12P58397 1594 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms