RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 PELP1Q8IZL8 1130 aaKnown RBP29.74■■■□□ 2.35
CACNA1A-247ENST00000637769 DCAF8L2P0C7V8 631 aa29.47■■■□□ 2.31
CACNA1A-247ENST00000637769 CCER1Q8TC90 406 aaPredicted RBP28.29■■■□□ 2.12
CACNA1A-247ENST00000637769 FAM9AQ8IZU1 332 aaPredicted RBP28.1■■■□□ 2.09
CACNA1A-247ENST00000637769 APLP2Q06481 763 aa28.09■■■□□ 2.09
CACNA1A-247ENST00000637769 ERICH6Q7L0X2 663 aa28.05■■■□□ 2.08
CACNA1A-247ENST00000637769 MYT1Q01538 1121 aa28.01■■■□□ 2.07
CACNA1A-247ENST00000637769 SUPT5HO00267 1087 aaKnown RBP28.01■■■□□ 2.07
CACNA1A-247ENST00000637769 CENPBP07199 599 aaPredicted RBP27.71■■■□□ 2.03
CACNA1A-247ENST00000637769 ZEB1P37275 1124 aaPredicted RBP27.4■■□□□ 1.98
CACNA1A-247ENST00000637769 NEFLP07196 543 aa27.28■■□□□ 1.96
CACNA1A-247ENST00000637769 YTHDC1Q96MU7 727 aaKnown RBP27.26■■□□□ 1.95
CACNA1A-247ENST00000637769 NISCHQ9Y2I1 1504 aa27.21■■□□□ 1.95
CACNA1A-247ENST00000637769 EHMT2Q96KQ7 1210 aa27.14■■□□□ 1.94
CACNA1A-247ENST00000637769 SHROOM4Q9ULL8 1493 aa27.08■■□□□ 1.93
CACNA1A-247ENST00000637769 DAXXQ9UER7 740 aaPredicted RBP26.91■■□□□ 1.9
CACNA1A-247ENST00000637769 PCGF6Q9BYE7 350 aa26.82■■□□□ 1.88
CACNA1A-247ENST00000637769 TTBK1Q5TCY1 1321 aaPredicted RBP26.46■■□□□ 1.83
CACNA1A-247ENST00000637769 ATP1B4Q9UN42 357 aaPredicted RBP26.38■■□□□ 1.81
CACNA1A-247ENST00000637769 TRIM41Q8WV44 630 aa26.26■■□□□ 1.79
CACNA1A-247ENST00000637769 UBTFP17480 764 aaKnown RBP26.2■■□□□ 1.78
CACNA1A-247ENST00000637769 RTL5Q5HYW3 569 aaPredicted RBP26.15■■□□□ 1.78
CACNA1A-247ENST00000637769 ZNF316A6NFI3 1004 aaPredicted RBP26.12■■□□□ 1.77
CACNA1A-247ENST00000637769 RANGAP1P46060 587 aaPredicted RBP26.11■■□□□ 1.77
CACNA1A-247ENST00000637769 CLSPNQ9HAW4 1339 aa25.81■■□□□ 1.72
CACNA1A-247ENST00000637769 TRIM26Q12899 539 aaPredicted RBP25.77■■□□□ 1.72
CACNA1A-247ENST00000637769 MYT1LQ9UL68 1186 aa25.69■■□□□ 1.7
CACNA1A-247ENST00000637769 POLR3GLQ9BT43 218 aa25.61■■□□□ 1.69
CACNA1A-247ENST00000637769 ZBTB47Q9UFB7 747 aaPredicted RBP25.52■■□□□ 1.68
CACNA1A-247ENST00000637769 SLC4A1APQ9BWU0 796 aaKnown RBP25.44■■□□□ 1.66
CACNA1A-247ENST00000637769 HRCP23327 699 aa25.43■■□□□ 1.66
CACNA1A-247ENST00000637769 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.42■■□□□ 1.66
CACNA1A-247ENST00000637769 HNRNPUL2Q1KMD3 747 aaKnown RBP25.42■■□□□ 1.66
CACNA1A-247ENST00000637769 ITGAEP38570 1179 aa25.23■■□□□ 1.63
CACNA1A-247ENST00000637769 CDK11AQ9UQ88 783 aaPredicted RBP25.21■■□□□ 1.63
CACNA1A-247ENST00000637769 ANP32BQ92688 251 aaKnown RBP25.2■■□□□ 1.62
CACNA1A-247ENST00000637769 GLIPR1L2Q4G1C9 344 aa25.17■■□□□ 1.62
CACNA1A-247ENST00000637769 DIEXFQ68CQ4 756 aaKnown RBP25.14■■□□□ 1.62
CACNA1A-247ENST00000637769 NEFMP07197 916 aa25.09■■□□□ 1.61
CACNA1A-247ENST00000637769 PPARGC1BQ86YN6 1023 aaKnown RBP25.03■■□□□ 1.6
CACNA1A-247ENST00000637769 ANP32AP39687 249 aaKnown RBP25.01■■□□□ 1.59
CACNA1A-247ENST00000637769 CNGB1Q14028 1251 aaPredicted RBP25■■□□□ 1.59
CACNA1A-247ENST00000637769 CANXP27824 592 aaKnown RBP24.98■■□□□ 1.59
CACNA1A-247ENST00000637769 CHIC1Q5VXU3 224 aa24.97■■□□□ 1.59
CACNA1A-247ENST00000637769 ANP32CO43423 234 aa24.96■■□□□ 1.59
CACNA1A-247ENST00000637769 UPF2Q9HAU5 1272 aaKnown RBP24.77■■□□□ 1.56
CACNA1A-247ENST00000637769 HSP90AA1P07900 732 aaKnown RBP24.76■■□□□ 1.55
CACNA1A-247ENST00000637769 FAM50AQ14320 339 aaKnown RBP24.73■■□□□ 1.55
CACNA1A-247ENST00000637769 TRIM52Q96A61 297 aa24.71■■□□□ 1.55
CACNA1A-247ENST00000637769 SLC24A1O60721 1099 aa24.71■■□□□ 1.55
CACNA1A-247ENST00000637769 EIF5BO60841 1220 aaKnown RBP24.59■■□□□ 1.53
CACNA1A-247ENST00000637769 CDK11BP21127 795 aaKnown RBP24.53■■□□□ 1.52
CACNA1A-247ENST00000637769 GTF3C3Q9Y5Q9 886 aa24.53■■□□□ 1.52
CACNA1A-247ENST00000637769 NEUROD1Q13562 356 aa24.49■■□□□ 1.51
CACNA1A-247ENST00000637769 BCANQ96GW7 911 aa24.47■■□□□ 1.51
CACNA1A-247ENST00000637769 ZNF326Q5BKZ1 582 aaKnown RBP24.42■■□□□ 1.5
CACNA1A-247ENST00000637769 BCL11AQ9H165 835 aa24.36■■□□□ 1.49
CACNA1A-247ENST00000637769 LOC105371045A0A1W2PR82 267 aa24.32■■□□□ 1.48
CACNA1A-247ENST00000637769 ANP32EQ9BTT0 268 aa24.32■■□□□ 1.48
CACNA1A-247ENST00000637769 TNNT2P45379 298 aaPredicted RBP24.31■■□□□ 1.48
CACNA1A-247ENST00000637769 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.29■■□□□ 1.48
CACNA1A-247ENST00000637769 NPM2Q86SE8 214 aaKnown RBP24.26■■□□□ 1.47
CACNA1A-247ENST00000637769 ESF1Q9H501 851 aaKnown RBP24.14■■□□□ 1.46
CACNA1A-247ENST00000637769 MYH16Q9H6N6 1097 aa24.12■■□□□ 1.45
CACNA1A-247ENST00000637769 ACIN1Q9UKV3 1341 aaKnown RBP24.11■■□□□ 1.45
CACNA1A-247ENST00000637769 TRIM44Q96DX7 344 aaPredicted RBP24.07■■□□□ 1.44
CACNA1A-247ENST00000637769 BECN1Q14457 450 aa24.05■■□□□ 1.44
CACNA1A-247ENST00000637769 NCLP19338 710 aaKnown RBP24.04■■□□□ 1.44
CACNA1A-247ENST00000637769 GOLGA6L22H0YM25 854 aa24.04■■□□□ 1.44
CACNA1A-247ENST00000637769 TONSLQ96HA7 1378 aa24.03■■□□□ 1.44
CACNA1A-247ENST00000637769 DDRGK1Q96HY6 314 aa23.98■■□□□ 1.43
CACNA1A-247ENST00000637769 CCDC136Q96JN2 1154 aa23.97■■□□□ 1.43
CACNA1A-247ENST00000637769 ZRSR1Q15695 479 aaKnown RBP23.97■■□□□ 1.43
CACNA1A-247ENST00000637769 STAG3Q9UJ98 1225 aa23.92■■□□□ 1.42
CACNA1A-247ENST00000637769 FKBP8Q14318 412 aa23.91■■□□□ 1.42
CACNA1A-247ENST00000637769 HNRNPUQ00839 825 aaKnown RBP eCLIP23.87■■□□□ 1.41
CACNA1A-247ENST00000637769 WDR43Q15061 677 aaKnown RBP eCLIP23.87■■□□□ 1.41
CACNA1A-247ENST00000637769 TMC1Q8TDI8 760 aa23.86■■□□□ 1.41
CACNA1A-247ENST00000637769 FBLN2P98095 1184 aa23.82■■□□□ 1.4
CACNA1A-247ENST00000637769 CASC1Q6TDU7 716 aa23.82■■□□□ 1.4
CACNA1A-247ENST00000637769 NBR1Q14596 966 aa23.82■■□□□ 1.4
CACNA1A-247ENST00000637769 GOLGA6L6A8MZA4 724 aa23.79■■□□□ 1.4
CACNA1A-247ENST00000637769 ERICH6BQ5W0A0 696 aa23.76■■□□□ 1.39
CACNA1A-247ENST00000637769 NRDCO43847 1150 aa23.75■■□□□ 1.39
CACNA1A-247ENST00000637769 PTMAP06454 111 aaKnown RBP23.71■■□□□ 1.39
CACNA1A-247ENST00000637769 ARXQ96QS3 562 aa23.7■■□□□ 1.39
CACNA1A-247ENST00000637769 DNTTIP2Q5QJE6 756 aaKnown RBP23.69■■□□□ 1.38
CACNA1A-247ENST00000637769 FAM9BQ8IZU0 186 aa23.67■■□□□ 1.38
CACNA1A-247ENST00000637769 ZNF777Q9ULD5 760 aaPredicted RBP23.65■■□□□ 1.38
CACNA1A-247ENST00000637769 L1TD1Q5T7N2 865 aaKnown RBP23.63■■□□□ 1.37
CACNA1A-247ENST00000637769 CHAF1AQ13111 956 aaPredicted RBP23.59■■□□□ 1.37
CACNA1A-247ENST00000637769 CHMP4BQ9H444 224 aaKnown RBP23.57■■□□□ 1.36
CACNA1A-247ENST00000637769 CHGAP10645 457 aaKnown RBP23.56■■□□□ 1.36
CACNA1A-247ENST00000637769 NPM1P06748 294 aaKnown RBP eCLIP23.56■■□□□ 1.36
CACNA1A-247ENST00000637769 PPM1GO15355 546 aaPredicted RBP23.51■■□□□ 1.35
CACNA1A-247ENST00000637769 DCAF1Q9Y4B6 1507 aa23.5■■□□□ 1.35
CACNA1A-247ENST00000637769 MRS2Q9HD23 443 aa23.5■■□□□ 1.35
CACNA1A-247ENST00000637769 DDX10Q13206 875 aaKnown RBP23.44■■□□□ 1.34
CACNA1A-247ENST00000637769 CDCA8Q53HL2 280 aa23.44■■□□□ 1.34
CACNA1A-247ENST00000637769 CSRNP3Q8WYN3 585 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms