RNA–Protein interactions for RNA: ENST00000269385.8

CBX8-201, Transcript of chromobox 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX8, Length 3,791 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8-201ENST00000269385 NISCHQ9Y2I1 1504 aa32.58■■■□□ 2.81
CBX8-201ENST00000269385 CCDC180Q9P1Z9 1646 aa28.11■■■□□ 2.09
CBX8-201ENST00000269385 PELP1Q8IZL8 1130 aaKnown RBP27.93■■■□□ 2.06
CBX8-201ENST00000269385 ZCCHC6Q5VYS8 1495 aaKnown RBP27.64■■■□□ 2.01
CBX8-201ENST00000269385 MYT1Q01538 1121 aa27.26■■□□□ 1.95
CBX8-201ENST00000269385 DCAF1Q9Y4B6 1507 aa26.98■■□□□ 1.91
CBX8-201ENST00000269385 HRCP23327 699 aa26.96■■□□□ 1.91
CBX8-201ENST00000269385 SHROOM4Q9ULL8 1493 aa26.82■■□□□ 1.88
CBX8-201ENST00000269385 PPARGC1BQ86YN6 1023 aaKnown RBP26.58■■□□□ 1.85
CBX8-201ENST00000269385 PCGF6Q9BYE7 350 aa26.44■■□□□ 1.82
CBX8-201ENST00000269385 MYO15BQ96JP2 1530 aa26.32■■□□□ 1.8
CBX8-201ENST00000269385 ABCC9O60706 1549 aa26.08■■□□□ 1.77
CBX8-201ENST00000269385 SCAF1Q9H7N4 1312 aaKnown RBP26.04■■□□□ 1.76
CBX8-201ENST00000269385 SUPT5HO00267 1087 aaKnown RBP25.96■■□□□ 1.75
CBX8-201ENST00000269385 SCRIBQ14160 1630 aa25.87■■□□□ 1.73
CBX8-201ENST00000269385 DCAF8L2P0C7V8 631 aa25.76■■□□□ 1.71
CBX8-201ENST00000269385 NACADO15069 1562 aa25.76■■□□□ 1.71
CBX8-201ENST00000269385 TTBK1Q5TCY1 1321 aaPredicted RBP25.61■■□□□ 1.69
CBX8-201ENST00000269385 CHIC1Q5VXU3 224 aa25.61■■□□□ 1.69
CBX8-201ENST00000269385 RSF1Q96T23 1441 aaPredicted RBP25.58■■□□□ 1.69
CBX8-201ENST00000269385 UNC13AQ9UPW8 1703 aa25.55■■□□□ 1.68
CBX8-201ENST00000269385 RB1CC1Q8TDY2 1594 aa25.41■■□□□ 1.66
CBX8-201ENST00000269385 CENPBP07199 599 aaPredicted RBP25.39■■□□□ 1.65
CBX8-201ENST00000269385 GTF3C3Q9Y5Q9 886 aa25.38■■□□□ 1.65
CBX8-201ENST00000269385 CECR2Q9BXF3 1484 aa25.35■■□□□ 1.65
CBX8-201ENST00000269385 MROH2BQ7Z745 1585 aa25.31■■□□□ 1.64
CBX8-201ENST00000269385 ZEB1P37275 1124 aaPredicted RBP25.3■■□□□ 1.64
CBX8-201ENST00000269385 ACIN1Q9UKV3 1341 aaKnown RBP25.28■■□□□ 1.64
CBX8-201ENST00000269385 EIF4G1Q04637 1599 aaKnown RBP25.26■■□□□ 1.63
CBX8-201ENST00000269385 WIZO95785 1651 aa25.23■■□□□ 1.63
CBX8-201ENST00000269385 BCL11AQ9H165 835 aa25.17■■□□□ 1.62
CBX8-201ENST00000269385 NEUROD1Q13562 356 aa25.13■■□□□ 1.61
CBX8-201ENST00000269385 BAZ1AQ9NRL2 1556 aaPredicted RBP25.12■■□□□ 1.61
CBX8-201ENST00000269385 BICRAQ9NZM4 1560 aa25.04■■□□□ 1.6
CBX8-201ENST00000269385 TRIM26Q12899 539 aaPredicted RBP24.99■■□□□ 1.59
CBX8-201ENST00000269385 SMARCA4P51532 1647 aa24.95■■□□□ 1.58
CBX8-201ENST00000269385 PRKCSHP14314 528 aaPredicted RBP24.8■■□□□ 1.56
CBX8-201ENST00000269385 TOP2AP11388 1531 aaKnown RBP24.79■■□□□ 1.56
CBX8-201ENST00000269385 YTHDC1Q96MU7 727 aaKnown RBP24.77■■□□□ 1.56
CBX8-201ENST00000269385 FAM9AQ8IZU1 332 aaPredicted RBP24.75■■□□□ 1.55
CBX8-201ENST00000269385 PEG3Q9GZU2 1588 aa24.73■■□□□ 1.55
CBX8-201ENST00000269385 SMARCA2P51531 1590 aa24.73■■□□□ 1.55
CBX8-201ENST00000269385 ERICH6Q7L0X2 663 aa24.72■■□□□ 1.55
CBX8-201ENST00000269385 LOC105371045A0A1W2PR82 267 aa24.67■■□□□ 1.54
CBX8-201ENST00000269385 CCDC88BA6NC98 1476 aa24.55■■□□□ 1.52
CBX8-201ENST00000269385 DIEXFQ68CQ4 756 aaKnown RBP24.54■■□□□ 1.52
CBX8-201ENST00000269385 ANP32EQ9BTT0 268 aa24.48■■□□□ 1.51
CBX8-201ENST00000269385 ABCC8Q09428 1581 aa24.4■■□□□ 1.5
CBX8-201ENST00000269385 CCER1Q8TC90 406 aaPredicted RBP24.36■■□□□ 1.49
CBX8-201ENST00000269385 TRIM41Q8WV44 630 aa24.26■■□□□ 1.47
CBX8-201ENST00000269385 PABPN1Q86U42 306 aaKnown RBP eCLIP24.24■■□□□ 1.47
CBX8-201ENST00000269385 CSRNP3Q8WYN3 585 aa24.23■■□□□ 1.47
CBX8-201ENST00000269385 ATAD2BQ9ULI0 1458 aa24.19■■□□□ 1.46
CBX8-201ENST00000269385 SYNJ1O43426 1573 aa24.1■■□□□ 1.45
CBX8-201ENST00000269385 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.09■■□□□ 1.45
CBX8-201ENST00000269385 EHMT2Q96KQ7 1210 aa24.04■■□□□ 1.44
CBX8-201ENST00000269385 RUSC2Q8N2Y8 1516 aa24.03■■□□□ 1.44
CBX8-201ENST00000269385 SOGA1O94964 1423 aa24■■□□□ 1.43
CBX8-201ENST00000269385 HMGXB3Q12766 1538 aa23.92■■□□□ 1.42
CBX8-201ENST00000269385 BIVM-ERCC5R4GMW8 1640 aa23.91■■□□□ 1.42
CBX8-201ENST00000269385 BAZ1BQ9UIG0 1483 aaKnown RBP23.89■■□□□ 1.42
CBX8-201ENST00000269385 WRNQ14191 1432 aaPredicted RBP eCLIP23.83■■□□□ 1.41
CBX8-201ENST00000269385 TOP2BQ02880 1626 aa23.83■■□□□ 1.41
CBX8-201ENST00000269385 PRDM2Q13029 1718 aa23.82■■□□□ 1.4
CBX8-201ENST00000269385 KIF21BO75037 1637 aa23.81■■□□□ 1.4
CBX8-201ENST00000269385 NCAPD3P42695 1498 aa23.81■■□□□ 1.4
CBX8-201ENST00000269385 EEA1Q15075 1411 aa23.74■■□□□ 1.39
CBX8-201ENST00000269385 TSHZ2Q9NRE2 1034 aa23.73■■□□□ 1.39
CBX8-201ENST00000269385 APLP2Q06481 763 aa23.7■■□□□ 1.38
CBX8-201ENST00000269385 TNIKQ9UKE5 1360 aa23.68■■□□□ 1.38
CBX8-201ENST00000269385 ZNF316A6NFI3 1004 aaPredicted RBP23.67■■□□□ 1.38
CBX8-201ENST00000269385 BCANQ96GW7 911 aa23.67■■□□□ 1.38
CBX8-201ENST00000269385 CEP162Q5TB80 1403 aa23.67■■□□□ 1.38
CBX8-201ENST00000269385 MIER1Q8N108 512 aa23.62■■□□□ 1.37
CBX8-201ENST00000269385 SUPT16HQ9Y5B9 1047 aaKnown RBP23.62■■□□□ 1.37
CBX8-201ENST00000269385 CUX1P39880 1505 aa23.6■■□□□ 1.37
CBX8-201ENST00000269385 CFTRP13569 1480 aa23.56■■□□□ 1.36
CBX8-201ENST00000269385 GOLGA3Q08378 1498 aa23.55■■□□□ 1.36
CBX8-201ENST00000269385 ANO8Q9HCE9 1232 aaPredicted RBP23.54■■□□□ 1.36
CBX8-201ENST00000269385 CC2D2AQ9P2K1 1620 aa23.53■■□□□ 1.36
CBX8-201ENST00000269385 CLSPNQ9HAW4 1339 aa23.5■■□□□ 1.35
CBX8-201ENST00000269385 RAPGEF2Q9Y4G8 1499 aa23.47■■□□□ 1.35
CBX8-201ENST00000269385 CEP164Q9UPV0 1460 aa23.46■■□□□ 1.35
CBX8-201ENST00000269385 PRXQ9BXM0 1461 aa23.43■■□□□ 1.34
CBX8-201ENST00000269385 NEFLP07196 543 aa23.41■■□□□ 1.34
CBX8-201ENST00000269385 ERICH3Q5RHP9 1530 aa23.4■■□□□ 1.34
CBX8-201ENST00000269385 DNAJC5BQ9UF47 199 aa23.38■■□□□ 1.33
CBX8-201ENST00000269385 CCDC136Q96JN2 1154 aa23.34■■□□□ 1.33
CBX8-201ENST00000269385 RBM19Q9Y4C8 960 aaKnown RBP23.26■■□□□ 1.31
CBX8-201ENST00000269385 DEKP35659 375 aaKnown RBP23.23■■□□□ 1.31
CBX8-201ENST00000269385 ARAP1Q96P48 1450 aa23.23■■□□□ 1.31
CBX8-201ENST00000269385 MYT1LQ9UL68 1186 aa23.23■■□□□ 1.31
CBX8-201ENST00000269385 CLIP1P30622 1438 aa23.22■■□□□ 1.31
CBX8-201ENST00000269385 FKBP8Q14318 412 aa23.21■■□□□ 1.31
CBX8-201ENST00000269385 EIF5BO60841 1220 aaKnown RBP23.21■■□□□ 1.31
CBX8-201ENST00000269385 VPS8Q8N3P4 1428 aa23.18■■□□□ 1.3
CBX8-201ENST00000269385 WDR97A6NE52 1622 aa23.16■■□□□ 1.3
CBX8-201ENST00000269385 SALL2Q9Y467 1007 aaPredicted RBP23.14■■□□□ 1.3
CBX8-201ENST00000269385 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.13■■□□□ 1.29
CBX8-201ENST00000269385 RTN4Q9NQC3 1192 aaKnown RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms