RNA–Protein interactions for RNA: ENST00000262435.13

SMURF2-201, Transcript of SMAD specific E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMURF2, Length 2,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF2-201ENST00000262435 NISCHQ9Y2I1 1504 aa31.7■■■□□ 2.67
SMURF2-201ENST00000262435 SHROOM4Q9ULL8 1493 aa28■■■□□ 2.07
SMURF2-201ENST00000262435 SUPT5HO00267 1087 aaKnown RBP27.56■■■□□ 2
SMURF2-201ENST00000262435 DCAF8L2P0C7V8 631 aa27.23■■□□□ 1.95
SMURF2-201ENST00000262435 ZCCHC6Q5VYS8 1495 aaKnown RBP26.76■■□□□ 1.87
SMURF2-201ENST00000262435 CHIC1Q5VXU3 224 aa26.53■■□□□ 1.84
SMURF2-201ENST00000262435 MYO15BQ96JP2 1530 aa26.46■■□□□ 1.83
SMURF2-201ENST00000262435 CCDC180Q9P1Z9 1646 aa26.43■■□□□ 1.82
SMURF2-201ENST00000262435 PCGF6Q9BYE7 350 aa26.21■■□□□ 1.79
SMURF2-201ENST00000262435 LOC105371045A0A1W2PR82 267 aa26.1■■□□□ 1.77
SMURF2-201ENST00000262435 HRCP23327 699 aa26■■□□□ 1.75
SMURF2-201ENST00000262435 PPARGC1BQ86YN6 1023 aaKnown RBP25.89■■□□□ 1.73
SMURF2-201ENST00000262435 EHMT2Q96KQ7 1210 aa25.69■■□□□ 1.7
SMURF2-201ENST00000262435 DCAF1Q9Y4B6 1507 aa25.61■■□□□ 1.69
SMURF2-201ENST00000262435 FAM9AQ8IZU1 332 aaPredicted RBP25.6■■□□□ 1.69
SMURF2-201ENST00000262435 SCRIBQ14160 1630 aa25.45■■□□□ 1.66
SMURF2-201ENST00000262435 TRIM41Q8WV44 630 aa25.4■■□□□ 1.66
SMURF2-201ENST00000262435 RSF1Q96T23 1441 aaPredicted RBP25.34■■□□□ 1.65
SMURF2-201ENST00000262435 TRIM26Q12899 539 aaPredicted RBP25.3■■□□□ 1.64
SMURF2-201ENST00000262435 ABCC9O60706 1549 aa25.24■■□□□ 1.63
SMURF2-201ENST00000262435 RB1CC1Q8TDY2 1594 aa25.1■■□□□ 1.61
SMURF2-201ENST00000262435 CECR2Q9BXF3 1484 aa25.03■■□□□ 1.6
SMURF2-201ENST00000262435 MROH2BQ7Z745 1585 aa24.83■■□□□ 1.57
SMURF2-201ENST00000262435 TTBK1Q5TCY1 1321 aaPredicted RBP24.83■■□□□ 1.56
SMURF2-201ENST00000262435 WIZO95785 1651 aa24.69■■□□□ 1.54
SMURF2-201ENST00000262435 ZEB1P37275 1124 aaPredicted RBP24.62■■□□□ 1.53
SMURF2-201ENST00000262435 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.62■■□□□ 1.53
SMURF2-201ENST00000262435 NACADO15069 1562 aa24.58■■□□□ 1.53
SMURF2-201ENST00000262435 CCER1Q8TC90 406 aaPredicted RBP24.45■■□□□ 1.5
SMURF2-201ENST00000262435 PABPN1Q86U42 306 aaKnown RBP eCLIP24.41■■□□□ 1.5
SMURF2-201ENST00000262435 ABCC8Q09428 1581 aa24.38■■□□□ 1.49
SMURF2-201ENST00000262435 CCDC88BA6NC98 1476 aa24.32■■□□□ 1.48
SMURF2-201ENST00000262435 UBTFP17480 764 aaKnown RBP24.29■■□□□ 1.48
SMURF2-201ENST00000262435 BAZ1AQ9NRL2 1556 aaPredicted RBP24.26■■□□□ 1.47
SMURF2-201ENST00000262435 SCAF1Q9H7N4 1312 aaKnown RBP24.25■■□□□ 1.47
SMURF2-201ENST00000262435 SOGA1O94964 1423 aa24.25■■□□□ 1.47
SMURF2-201ENST00000262435 RANGAP1P46060 587 aaPredicted RBP24.18■■□□□ 1.46
SMURF2-201ENST00000262435 RUSC2Q8N2Y8 1516 aa24.15■■□□□ 1.46
SMURF2-201ENST00000262435 CEP162Q5TB80 1403 aa24.1■■□□□ 1.45
SMURF2-201ENST00000262435 CSRNP3Q8WYN3 585 aa24.1■■□□□ 1.45
SMURF2-201ENST00000262435 EIF4G1Q04637 1599 aaKnown RBP24.09■■□□□ 1.45
SMURF2-201ENST00000262435 TOP2AP11388 1531 aaKnown RBP24.07■■□□□ 1.44
SMURF2-201ENST00000262435 SMARCA4P51532 1647 aa24.05■■□□□ 1.44
SMURF2-201ENST00000262435 SMARCA2P51531 1590 aa24.03■■□□□ 1.44
SMURF2-201ENST00000262435 DIEXFQ68CQ4 756 aaKnown RBP23.99■■□□□ 1.43
SMURF2-201ENST00000262435 HNRNPUL2Q1KMD3 747 aaKnown RBP23.97■■□□□ 1.43
SMURF2-201ENST00000262435 NEUROD1Q13562 356 aa23.94■■□□□ 1.42
SMURF2-201ENST00000262435 TNIKQ9UKE5 1360 aa23.9■■□□□ 1.42
SMURF2-201ENST00000262435 UNC13AQ9UPW8 1703 aa23.85■■□□□ 1.41
SMURF2-201ENST00000262435 WRNQ14191 1432 aaPredicted RBP eCLIP23.82■■□□□ 1.4
SMURF2-201ENST00000262435 ACIN1Q9UKV3 1341 aaKnown RBP23.82■■□□□ 1.4
SMURF2-201ENST00000262435 YTHDC1Q96MU7 727 aaKnown RBP23.8■■□□□ 1.4
SMURF2-201ENST00000262435 GTF3C3Q9Y5Q9 886 aa23.74■■□□□ 1.39
SMURF2-201ENST00000262435 GOLGA3Q08378 1498 aa23.72■■□□□ 1.39
SMURF2-201ENST00000262435 APLP2Q06481 763 aa23.66■■□□□ 1.38
SMURF2-201ENST00000262435 BICRAQ9NZM4 1560 aa23.66■■□□□ 1.38
SMURF2-201ENST00000262435 EEA1Q15075 1411 aa23.65■■□□□ 1.38
SMURF2-201ENST00000262435 ZNF316A6NFI3 1004 aaPredicted RBP23.64■■□□□ 1.38
SMURF2-201ENST00000262435 CLIP1P30622 1438 aa23.62■■□□□ 1.37
SMURF2-201ENST00000262435 SYNJ1O43426 1573 aa23.62■■□□□ 1.37
SMURF2-201ENST00000262435 CENPBP07199 599 aaPredicted RBP23.6■■□□□ 1.37
SMURF2-201ENST00000262435 RAPGEF2Q9Y4G8 1499 aa23.55■■□□□ 1.36
SMURF2-201ENST00000262435 CEP164Q9UPV0 1460 aa23.53■■□□□ 1.36
SMURF2-201ENST00000262435 MIER1Q8N108 512 aa23.53■■□□□ 1.36
SMURF2-201ENST00000262435 ATAD2BQ9ULI0 1458 aa23.52■■□□□ 1.36
SMURF2-201ENST00000262435 BAZ1BQ9UIG0 1483 aaKnown RBP23.52■■□□□ 1.36
SMURF2-201ENST00000262435 PELP1Q8IZL8 1130 aaKnown RBP23.46■■□□□ 1.35
SMURF2-201ENST00000262435 VPS8Q8N3P4 1428 aa23.41■■□□□ 1.34
SMURF2-201ENST00000262435 ITGAEP38570 1179 aa23.4■■□□□ 1.34
SMURF2-201ENST00000262435 KANK4Q5T7N3 995 aaPredicted RBP23.39■■□□□ 1.33
SMURF2-201ENST00000262435 PEG3Q9GZU2 1588 aa23.32■■□□□ 1.32
SMURF2-201ENST00000262435 KIF21BO75037 1637 aa23.3■■□□□ 1.32
SMURF2-201ENST00000262435 TOP2BQ02880 1626 aa23.13■■□□□ 1.29
SMURF2-201ENST00000262435 ATP1B4Q9UN42 357 aaPredicted RBP23.11■■□□□ 1.29
SMURF2-201ENST00000262435 ARAP1Q96P48 1450 aa23.11■■□□□ 1.29
SMURF2-201ENST00000262435 DHX57Q6P158 1386 aaKnown RBP23.1■■□□□ 1.29
SMURF2-201ENST00000262435 P3H3Q8IVL6 736 aa23.09■■□□□ 1.29
SMURF2-201ENST00000262435 PRXQ9BXM0 1461 aa23.06■■□□□ 1.28
SMURF2-201ENST00000262435 CUX1P39880 1505 aa23.05■■□□□ 1.28
SMURF2-201ENST00000262435 KIF27Q86VH2 1401 aa23.01■■□□□ 1.27
SMURF2-201ENST00000262435 FAM50AQ14320 339 aaKnown RBP22.93■■□□□ 1.26
SMURF2-201ENST00000262435 KCNH8Q96L42 1107 aa22.92■■□□□ 1.26
SMURF2-201ENST00000262435 BIVM-ERCC5R4GMW8 1640 aa22.91■■□□□ 1.26
SMURF2-201ENST00000262435 CCNB3Q8WWL7 1395 aa22.91■■□□□ 1.26
SMURF2-201ENST00000262435 ARHGAP35Q9NRY4 1499 aa22.91■■□□□ 1.26
SMURF2-201ENST00000262435 NCAPD3P42695 1498 aa22.9■■□□□ 1.26
SMURF2-201ENST00000262435 ERICH3Q5RHP9 1530 aa22.89■■□□□ 1.25
SMURF2-201ENST00000262435 CUX2O14529 1486 aa22.89■■□□□ 1.25
SMURF2-201ENST00000262435 HIRIP3Q9BW71 556 aaPredicted RBP22.87■■□□□ 1.25
SMURF2-201ENST00000262435 SIN3AQ96ST3 1273 aa22.86■■□□□ 1.25
SMURF2-201ENST00000262435 IGF1RP08069 1367 aa22.84■■□□□ 1.25
SMURF2-201ENST00000262435 CFTRP13569 1480 aa22.83■■□□□ 1.24
SMURF2-201ENST00000262435 RAB3GAP2Q9H2M9 1393 aa22.81■■□□□ 1.24
SMURF2-201ENST00000262435 RRBP1Q9P2E9 1410 aaKnown RBP22.81■■□□□ 1.24
SMURF2-201ENST00000262435 CLSPNQ9HAW4 1339 aa22.81■■□□□ 1.24
SMURF2-201ENST00000262435 CARMIL1Q5VZK9 1371 aa22.77■■□□□ 1.24
SMURF2-201ENST00000262435 HMGXB3Q12766 1538 aa22.74■■□□□ 1.23
SMURF2-201ENST00000262435 DDX10Q13206 875 aaKnown RBP22.74■■□□□ 1.23
SMURF2-201ENST00000262435 PHLDB1Q86UU1 1377 aa22.71■■□□□ 1.23
SMURF2-201ENST00000262435 SUPT16HQ9Y5B9 1047 aaKnown RBP22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms