RNA–Protein interactions for RNA: ENST00000396270.3

KRT8P39-201, Transcript of keratin 8 pseudogene 39, humanhuman

BASIC

Gene KRT8P39, Length 1,433 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT8P39-201ENST00000396270 NISCHQ9Y2I1 1504 aa38.54■■■■□ 3.76
KRT8P39-201ENST00000396270 CCDC180Q9P1Z9 1646 aa33.75■■■□□ 2.99
KRT8P39-201ENST00000396270 ZCCHC6Q5VYS8 1495 aaKnown RBP32.28■■■□□ 2.76
KRT8P39-201ENST00000396270 ABCC9O60706 1549 aa32.14■■■□□ 2.74
KRT8P39-201ENST00000396270 DCAF1Q9Y4B6 1507 aa31.93■■■□□ 2.7
KRT8P39-201ENST00000396270 DCAF8L2P0C7V8 631 aa31.91■■■□□ 2.7
KRT8P39-201ENST00000396270 MYO15BQ96JP2 1530 aa31.69■■■□□ 2.66
KRT8P39-201ENST00000396270 NACADO15069 1562 aa31.55■■■□□ 2.64
KRT8P39-201ENST00000396270 RB1CC1Q8TDY2 1594 aa31.33■■■□□ 2.61
KRT8P39-201ENST00000396270 SHROOM4Q9ULL8 1493 aa31.1■■■□□ 2.57
KRT8P39-201ENST00000396270 SCRIBQ14160 1630 aa30.91■■■□□ 2.54
KRT8P39-201ENST00000396270 UNC13AQ9UPW8 1703 aa30.59■■■□□ 2.49
KRT8P39-201ENST00000396270 BICRAQ9NZM4 1560 aa30.33■■■□□ 2.45
KRT8P39-201ENST00000396270 PABPN1Q86U42 306 aaKnown RBP eCLIP30.27■■■□□ 2.44
KRT8P39-201ENST00000396270 CECR2Q9BXF3 1484 aa29.92■■■□□ 2.38
KRT8P39-201ENST00000396270 SUPT5HO00267 1087 aaKnown RBP29.83■■■□□ 2.37
KRT8P39-201ENST00000396270 BAZ1AQ9NRL2 1556 aaPredicted RBP29.79■■■□□ 2.36
KRT8P39-201ENST00000396270 RSF1Q96T23 1441 aaPredicted RBP29.76■■■□□ 2.36
KRT8P39-201ENST00000396270 MROH2BQ7Z745 1585 aa29.71■■■□□ 2.35
KRT8P39-201ENST00000396270 SMARCA4P51532 1647 aa29.65■■■□□ 2.34
KRT8P39-201ENST00000396270 EIF4G1Q04637 1599 aaKnown RBP29.46■■■□□ 2.31
KRT8P39-201ENST00000396270 WIZO95785 1651 aa29.43■■■□□ 2.3
KRT8P39-201ENST00000396270 PEG3Q9GZU2 1588 aa29.36■■■□□ 2.29
KRT8P39-201ENST00000396270 ATAD2BQ9ULI0 1458 aa29.29■■■□□ 2.28
KRT8P39-201ENST00000396270 SMARCA2P51531 1590 aa29.28■■■□□ 2.28
KRT8P39-201ENST00000396270 TOP2AP11388 1531 aaKnown RBP29.17■■■□□ 2.26
KRT8P39-201ENST00000396270 NCAPD3P42695 1498 aa29.13■■■□□ 2.25
KRT8P39-201ENST00000396270 CC2D2AQ9P2K1 1620 aa29.09■■■□□ 2.25
KRT8P39-201ENST00000396270 BAZ1BQ9UIG0 1483 aaKnown RBP29.09■■■□□ 2.25
KRT8P39-201ENST00000396270 HMGXB3Q12766 1538 aa29.02■■■□□ 2.24
KRT8P39-201ENST00000396270 CCDC88BA6NC98 1476 aa28.87■■■□□ 2.21
KRT8P39-201ENST00000396270 DNAJC5BQ9UF47 199 aa28.64■■■□□ 2.18
KRT8P39-201ENST00000396270 CHIC1Q5VXU3 224 aa28.44■■■□□ 2.14
KRT8P39-201ENST00000396270 CFTRP13569 1480 aa28.37■■■□□ 2.13
KRT8P39-201ENST00000396270 CADPSQ9ULU8 1353 aa28.36■■■□□ 2.13
KRT8P39-201ENST00000396270 LAMC3Q9Y6N6 1575 aa28.16■■■□□ 2.1
KRT8P39-201ENST00000396270 PRDM2Q13029 1718 aa28.16■■■□□ 2.1
KRT8P39-201ENST00000396270 TRIM41Q8WV44 630 aa28.14■■■□□ 2.1
KRT8P39-201ENST00000396270 NESP48681 1621 aa28.1■■■□□ 2.09
KRT8P39-201ENST00000396270 ABCC8Q09428 1581 aa28.07■■■□□ 2.08
KRT8P39-201ENST00000396270 WRNQ14191 1432 aaPredicted RBP eCLIP28.04■■■□□ 2.08
KRT8P39-201ENST00000396270 FANCD2Q9BXW9 1451 aa28■■■□□ 2.07
KRT8P39-201ENST00000396270 PDS5BQ9NTI5 1447 aa28■■■□□ 2.07
KRT8P39-201ENST00000396270 SYNJ1O43426 1573 aa27.86■■■□□ 2.05
KRT8P39-201ENST00000396270 CEP164Q9UPV0 1460 aa27.84■■■□□ 2.05
KRT8P39-201ENST00000396270 TOP2BQ02880 1626 aa27.83■■■□□ 2.05
KRT8P39-201ENST00000396270 CUX1P39880 1505 aa27.81■■■□□ 2.04
KRT8P39-201ENST00000396270 BIVM-ERCC5R4GMW8 1640 aa27.79■■■□□ 2.04
KRT8P39-201ENST00000396270 KIF21AQ7Z4S6 1674 aa27.75■■■□□ 2.03
KRT8P39-201ENST00000396270 DNMBPQ6XZF7 1577 aa27.69■■■□□ 2.02
KRT8P39-201ENST00000396270 TOPBP1Q92547 1522 aa27.65■■■□□ 2.02
KRT8P39-201ENST00000396270 URB2Q14146 1524 aaKnown RBP27.63■■■□□ 2.01
KRT8P39-201ENST00000396270 ERCC6Q03468 1493 aa27.63■■■□□ 2.01
KRT8P39-201ENST00000396270 MRC2Q9UBG0 1479 aa27.6■■■□□ 2.01
KRT8P39-201ENST00000396270 FGD5Q6ZNL6 1462 aa27.56■■■□□ 2
KRT8P39-201ENST00000396270 SOGA1O94964 1423 aa27.54■■■□□ 2
KRT8P39-201ENST00000396270 EEA1Q15075 1411 aa27.53■■■□□ 2
KRT8P39-201ENST00000396270 FAM9AQ8IZU1 332 aaPredicted RBP27.52■■■□□ 2
KRT8P39-201ENST00000396270 POLA1P09884 1462 aaPredicted RBP27.48■■□□□ 1.99
KRT8P39-201ENST00000396270 WDR62O43379 1518 aa27.45■■□□□ 1.99
KRT8P39-201ENST00000396270 RUSC2Q8N2Y8 1516 aa27.42■■□□□ 1.98
KRT8P39-201ENST00000396270 CSRNP3Q8WYN3 585 aa27.4■■□□□ 1.98
KRT8P39-201ENST00000396270 THOC2Q8NI27 1593 aaKnown RBP27.39■■□□□ 1.98
KRT8P39-201ENST00000396270 KIF27Q86VH2 1401 aa27.39■■□□□ 1.97
KRT8P39-201ENST00000396270 RAD54L2Q9Y4B4 1467 aa27.37■■□□□ 1.97
KRT8P39-201ENST00000396270 ABCA10Q8WWZ4 1543 aa27.36■■□□□ 1.97
KRT8P39-201ENST00000396270 CUX2O14529 1486 aa27.33■■□□□ 1.97
KRT8P39-201ENST00000396270 LOC105371045A0A1W2PR82 267 aa27.29■■□□□ 1.96
KRT8P39-201ENST00000396270 IFT140Q96RY7 1462 aa27.25■■□□□ 1.95
KRT8P39-201ENST00000396270 TARBP1Q13395 1621 aaKnown RBP27.25■■□□□ 1.95
KRT8P39-201ENST00000396270 WDR97A6NE52 1622 aa27.22■■□□□ 1.95
KRT8P39-201ENST00000396270 IGF1RP08069 1367 aa27.18■■□□□ 1.94
KRT8P39-201ENST00000396270 TDRD9Q8NDG6 1382 aaKnown RBP27.15■■□□□ 1.94
KRT8P39-201ENST00000396270 KIF21BO75037 1637 aa27.11■■□□□ 1.93
KRT8P39-201ENST00000396270 GAPVD1Q14C86 1478 aa27.11■■□□□ 1.93
KRT8P39-201ENST00000396270 ABCA5Q8WWZ7 1642 aa27.11■■□□□ 1.93
KRT8P39-201ENST00000396270 PRXQ9BXM0 1461 aa27.1■■□□□ 1.93
KRT8P39-201ENST00000396270 EHMT2Q96KQ7 1210 aa27.07■■□□□ 1.92
KRT8P39-201ENST00000396270 GOLGA3Q08378 1498 aa27.07■■□□□ 1.92
KRT8P39-201ENST00000396270 CARMIL1Q5VZK9 1371 aa27.04■■□□□ 1.92
KRT8P39-201ENST00000396270 ERICH3Q5RHP9 1530 aa27.03■■□□□ 1.92
KRT8P39-201ENST00000396270 AQRO60306 1485 aaKnown RBP eCLIP27.03■■□□□ 1.92
KRT8P39-201ENST00000396270 ZNF608Q9ULD9 1512 aaPredicted RBP27.03■■□□□ 1.92
KRT8P39-201ENST00000396270 UBTFP17480 764 aaKnown RBP26.99■■□□□ 1.91
KRT8P39-201ENST00000396270 RAPGEF2Q9Y4G8 1499 aa26.99■■□□□ 1.91
KRT8P39-201ENST00000396270 GRIN2BQ13224 1484 aa26.97■■□□□ 1.91
KRT8P39-201ENST00000396270 TNIKQ9UKE5 1360 aa26.96■■□□□ 1.91
KRT8P39-201ENST00000396270 CUL7Q14999 1698 aa26.96■■□□□ 1.91
KRT8P39-201ENST00000396270 PBRM1Q86U86 1689 aa26.92■■□□□ 1.9
KRT8P39-201ENST00000396270 EIF4G3O43432 1585 aaKnown RBP26.91■■□□□ 1.9
KRT8P39-201ENST00000396270 FHAD1B1AJZ9 1412 aa26.84■■□□□ 1.89
KRT8P39-201ENST00000396270 MAGI1Q96QZ7 1491 aaPredicted RBP26.78■■□□□ 1.88
KRT8P39-201ENST00000396270 ADAMTS12P58397 1594 aa26.77■■□□□ 1.88
KRT8P39-201ENST00000396270 SNAPC4Q5SXM2 1469 aa26.77■■□□□ 1.88
KRT8P39-201ENST00000396270 CEP162Q5TB80 1403 aa26.73■■□□□ 1.87
KRT8P39-201ENST00000396270 SYNJ2O15056 1496 aa26.66■■□□□ 1.86
KRT8P39-201ENST00000396270 CHMP7Q8WUX9 453 aaPredicted RBP26.65■■□□□ 1.86
KRT8P39-201ENST00000396270 CLIP1P30622 1438 aa26.62■■□□□ 1.85
KRT8P39-201ENST00000396270 GRIN2AQ12879 1464 aa26.6■■□□□ 1.85
KRT8P39-201ENST00000396270 CTTNBP2Q8WZ74 1663 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms