RNA–Protein interactions for RNA: ENST00000340666.5

SYN1-202, Transcript of synapsin I, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1-202ENST00000340666 NISCHQ9Y2I1 1504 aa32.99■■■□□ 2.87
SYN1-202ENST00000340666 CCDC180Q9P1Z9 1646 aa28.24■■■□□ 2.11
SYN1-202ENST00000340666 ZCCHC6Q5VYS8 1495 aaKnown RBP27.97■■■□□ 2.07
SYN1-202ENST00000340666 SHROOM4Q9ULL8 1493 aa27.69■■■□□ 2.02
SYN1-202ENST00000340666 DCAF1Q9Y4B6 1507 aa27.28■■□□□ 1.96
SYN1-202ENST00000340666 SUPT5HO00267 1087 aaKnown RBP27.14■■□□□ 1.94
SYN1-202ENST00000340666 DCAF8L2P0C7V8 631 aa26.7■■□□□ 1.86
SYN1-202ENST00000340666 CHIC1Q5VXU3 224 aa26.66■■□□□ 1.86
SYN1-202ENST00000340666 MYO15BQ96JP2 1530 aa26.65■■□□□ 1.86
SYN1-202ENST00000340666 ABCC9O60706 1549 aa26.44■■□□□ 1.82
SYN1-202ENST00000340666 SCRIBQ14160 1630 aa26.15■■□□□ 1.78
SYN1-202ENST00000340666 RSF1Q96T23 1441 aaPredicted RBP26.04■■□□□ 1.76
SYN1-202ENST00000340666 NACADO15069 1562 aa25.98■■□□□ 1.75
SYN1-202ENST00000340666 HRCP23327 699 aa25.93■■□□□ 1.74
SYN1-202ENST00000340666 RB1CC1Q8TDY2 1594 aa25.88■■□□□ 1.73
SYN1-202ENST00000340666 LOC105371045A0A1W2PR82 267 aa25.7■■□□□ 1.7
SYN1-202ENST00000340666 PCGF6Q9BYE7 350 aa25.68■■□□□ 1.7
SYN1-202ENST00000340666 CECR2Q9BXF3 1484 aa25.58■■□□□ 1.69
SYN1-202ENST00000340666 MROH2BQ7Z745 1585 aa25.57■■□□□ 1.68
SYN1-202ENST00000340666 WIZO95785 1651 aa25.47■■□□□ 1.67
SYN1-202ENST00000340666 BAZ1AQ9NRL2 1556 aaPredicted RBP25.44■■□□□ 1.66
SYN1-202ENST00000340666 PPARGC1BQ86YN6 1023 aaKnown RBP25.42■■□□□ 1.66
SYN1-202ENST00000340666 TRIM41Q8WV44 630 aa25.4■■□□□ 1.66
SYN1-202ENST00000340666 TRIM26Q12899 539 aaPredicted RBP25.38■■□□□ 1.65
SYN1-202ENST00000340666 EIF4G1Q04637 1599 aaKnown RBP25.37■■□□□ 1.65
SYN1-202ENST00000340666 UNC13AQ9UPW8 1703 aa25.22■■□□□ 1.63
SYN1-202ENST00000340666 TOP2AP11388 1531 aaKnown RBP25.16■■□□□ 1.62
SYN1-202ENST00000340666 SMARCA4P51532 1647 aa25.15■■□□□ 1.62
SYN1-202ENST00000340666 SMARCA2P51531 1590 aa25■■□□□ 1.59
SYN1-202ENST00000340666 FAM9AQ8IZU1 332 aaPredicted RBP25■■□□□ 1.59
SYN1-202ENST00000340666 CCDC88BA6NC98 1476 aa24.93■■□□□ 1.58
SYN1-202ENST00000340666 ZEB1P37275 1124 aaPredicted RBP24.91■■□□□ 1.58
SYN1-202ENST00000340666 BICRAQ9NZM4 1560 aa24.83■■□□□ 1.57
SYN1-202ENST00000340666 ABCC8Q09428 1581 aa24.81■■□□□ 1.56
SYN1-202ENST00000340666 PEG3Q9GZU2 1588 aa24.8■■□□□ 1.56
SYN1-202ENST00000340666 WRNQ14191 1432 aaPredicted RBP eCLIP24.67■■□□□ 1.54
SYN1-202ENST00000340666 EEA1Q15075 1411 aa24.64■■□□□ 1.54
SYN1-202ENST00000340666 EHMT2Q96KQ7 1210 aa24.61■■□□□ 1.53
SYN1-202ENST00000340666 SOGA1O94964 1423 aa24.55■■□□□ 1.52
SYN1-202ENST00000340666 TNIKQ9UKE5 1360 aa24.54■■□□□ 1.52
SYN1-202ENST00000340666 CEP162Q5TB80 1403 aa24.51■■□□□ 1.51
SYN1-202ENST00000340666 RUSC2Q8N2Y8 1516 aa24.44■■□□□ 1.5
SYN1-202ENST00000340666 ATAD2BQ9ULI0 1458 aa24.41■■□□□ 1.5
SYN1-202ENST00000340666 GOLGA3Q08378 1498 aa24.39■■□□□ 1.49
SYN1-202ENST00000340666 PABPN1Q86U42 306 aaKnown RBP eCLIP24.39■■□□□ 1.49
SYN1-202ENST00000340666 SYNJ1O43426 1573 aa24.38■■□□□ 1.49
SYN1-202ENST00000340666 CSRNP3Q8WYN3 585 aa24.38■■□□□ 1.49
SYN1-202ENST00000340666 KIF21BO75037 1637 aa24.37■■□□□ 1.49
SYN1-202ENST00000340666 BAZ1BQ9UIG0 1483 aaKnown RBP24.29■■□□□ 1.48
SYN1-202ENST00000340666 CEP164Q9UPV0 1460 aa24.26■■□□□ 1.47
SYN1-202ENST00000340666 SCAF1Q9H7N4 1312 aaKnown RBP24.2■■□□□ 1.46
SYN1-202ENST00000340666 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.17■■□□□ 1.46
SYN1-202ENST00000340666 TOP2BQ02880 1626 aa24.17■■□□□ 1.46
SYN1-202ENST00000340666 BIVM-ERCC5R4GMW8 1640 aa24.15■■□□□ 1.46
SYN1-202ENST00000340666 CCER1Q8TC90 406 aaPredicted RBP24.13■■□□□ 1.45
SYN1-202ENST00000340666 UBTFP17480 764 aaKnown RBP24.11■■□□□ 1.45
SYN1-202ENST00000340666 HMGXB3Q12766 1538 aa24.07■■□□□ 1.44
SYN1-202ENST00000340666 CLIP1P30622 1438 aa24.02■■□□□ 1.44
SYN1-202ENST00000340666 PELP1Q8IZL8 1130 aaKnown RBP24.01■■□□□ 1.43
SYN1-202ENST00000340666 VPS8Q8N3P4 1428 aa24.01■■□□□ 1.43
SYN1-202ENST00000340666 RAPGEF2Q9Y4G8 1499 aa24■■□□□ 1.43
SYN1-202ENST00000340666 NCAPD3P42695 1498 aa23.98■■□□□ 1.43
SYN1-202ENST00000340666 ERICH3Q5RHP9 1530 aa23.97■■□□□ 1.43
SYN1-202ENST00000340666 PRXQ9BXM0 1461 aa23.89■■□□□ 1.41
SYN1-202ENST00000340666 TTBK1Q5TCY1 1321 aaPredicted RBP23.88■■□□□ 1.41
SYN1-202ENST00000340666 PRDM2Q13029 1718 aa23.84■■□□□ 1.41
SYN1-202ENST00000340666 CUX1P39880 1505 aa23.84■■□□□ 1.41
SYN1-202ENST00000340666 CFTRP13569 1480 aa23.78■■□□□ 1.4
SYN1-202ENST00000340666 DIEXFQ68CQ4 756 aaKnown RBP23.75■■□□□ 1.39
SYN1-202ENST00000340666 ARAP1Q96P48 1450 aa23.75■■□□□ 1.39
SYN1-202ENST00000340666 NEUROD1Q13562 356 aa23.72■■□□□ 1.39
SYN1-202ENST00000340666 ACIN1Q9UKV3 1341 aaKnown RBP23.7■■□□□ 1.38
SYN1-202ENST00000340666 KIF27Q86VH2 1401 aa23.66■■□□□ 1.38
SYN1-202ENST00000340666 ZNF316A6NFI3 1004 aaPredicted RBP23.64■■□□□ 1.38
SYN1-202ENST00000340666 APLP2Q06481 763 aa23.6■■□□□ 1.37
SYN1-202ENST00000340666 HNRNPUL2Q1KMD3 747 aaKnown RBP23.58■■□□□ 1.36
SYN1-202ENST00000340666 GTF3C3Q9Y5Q9 886 aa23.52■■□□□ 1.36
SYN1-202ENST00000340666 RRBP1Q9P2E9 1410 aaKnown RBP23.52■■□□□ 1.36
SYN1-202ENST00000340666 ARHGAP35Q9NRY4 1499 aa23.51■■□□□ 1.35
SYN1-202ENST00000340666 CLSPNQ9HAW4 1339 aa23.5■■□□□ 1.35
SYN1-202ENST00000340666 CUX2O14529 1486 aa23.48■■□□□ 1.35
SYN1-202ENST00000340666 CENPBP07199 599 aaPredicted RBP23.46■■□□□ 1.35
SYN1-202ENST00000340666 MAP3K1Q13233 1512 aa23.42■■□□□ 1.34
SYN1-202ENST00000340666 CADPSQ9ULU8 1353 aa23.42■■□□□ 1.34
SYN1-202ENST00000340666 DHX57Q6P158 1386 aaKnown RBP23.41■■□□□ 1.34
SYN1-202ENST00000340666 KANK4Q5T7N3 995 aaPredicted RBP23.41■■□□□ 1.34
SYN1-202ENST00000340666 RANGAP1P46060 587 aaPredicted RBP23.4■■□□□ 1.34
SYN1-202ENST00000340666 IGF1RP08069 1367 aa23.4■■□□□ 1.34
SYN1-202ENST00000340666 FGD5Q6ZNL6 1462 aa23.34■■□□□ 1.33
SYN1-202ENST00000340666 TIAM1Q13009 1591 aa23.32■■□□□ 1.32
SYN1-202ENST00000340666 CC2D2AQ9P2K1 1620 aa23.28■■□□□ 1.32
SYN1-202ENST00000340666 CCNB3Q8WWL7 1395 aa23.28■■□□□ 1.32
SYN1-202ENST00000340666 CFAP43Q8NDM7 1665 aa23.26■■□□□ 1.31
SYN1-202ENST00000340666 CARMIL1Q5VZK9 1371 aa23.25■■□□□ 1.31
SYN1-202ENST00000340666 MIER1Q8N108 512 aa23.24■■□□□ 1.31
SYN1-202ENST00000340666 DNMBPQ6XZF7 1577 aa23.22■■□□□ 1.31
SYN1-202ENST00000340666 YTHDC1Q96MU7 727 aaKnown RBP23.21■■□□□ 1.31
SYN1-202ENST00000340666 FANCD2Q9BXW9 1451 aa23.19■■□□□ 1.3
SYN1-202ENST00000340666 LRRC9Q6ZRR7 1453 aa23.18■■□□□ 1.3
SYN1-202ENST00000340666 ABCA10Q8WWZ4 1543 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms