RNA–Protein interactions for RNA: ENST00000529859.1

PCDHA5-202, Transcript of protocadherin alpha 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA5, Length 5,218 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA5-202ENST00000529859 DCAF8L2P0C7V8 631 aa30.55■■■□□ 2.48
PCDHA5-202ENST00000529859 SUPT5HO00267 1087 aaKnown RBP28.84■■■□□ 2.21
PCDHA5-202ENST00000529859 NISCHQ9Y2I1 1504 aa28.8■■■□□ 2.2
PCDHA5-202ENST00000529859 SHROOM4Q9ULL8 1493 aa28.23■■■□□ 2.11
PCDHA5-202ENST00000529859 EHMT2Q96KQ7 1210 aa27.86■■■□□ 2.05
PCDHA5-202ENST00000529859 APLP2Q06481 763 aa27.62■■■□□ 2.01
PCDHA5-202ENST00000529859 PELP1Q8IZL8 1130 aaKnown RBP27.35■■□□□ 1.97
PCDHA5-202ENST00000529859 FAM9AQ8IZU1 332 aaPredicted RBP27.32■■□□□ 1.96
PCDHA5-202ENST00000529859 TTBK1Q5TCY1 1321 aaPredicted RBP26.91■■□□□ 1.9
PCDHA5-202ENST00000529859 TRIM41Q8WV44 630 aa26.77■■□□□ 1.88
PCDHA5-202ENST00000529859 PCGF6Q9BYE7 350 aa26.77■■□□□ 1.88
PCDHA5-202ENST00000529859 RANGAP1P46060 587 aaPredicted RBP26.75■■□□□ 1.87
PCDHA5-202ENST00000529859 ATP1B4Q9UN42 357 aaPredicted RBP26.62■■□□□ 1.85
PCDHA5-202ENST00000529859 UBTFP17480 764 aaKnown RBP26.51■■□□□ 1.83
PCDHA5-202ENST00000529859 ZEB1P37275 1124 aaPredicted RBP26.49■■□□□ 1.83
PCDHA5-202ENST00000529859 CCER1Q8TC90 406 aaPredicted RBP26.46■■□□□ 1.83
PCDHA5-202ENST00000529859 CENPBP07199 599 aaPredicted RBP26.36■■□□□ 1.81
PCDHA5-202ENST00000529859 ERICH6Q7L0X2 663 aa26.11■■□□□ 1.77
PCDHA5-202ENST00000529859 NEFLP07196 543 aa25.92■■□□□ 1.74
PCDHA5-202ENST00000529859 PPARGC1BQ86YN6 1023 aaKnown RBP25.84■■□□□ 1.73
PCDHA5-202ENST00000529859 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.75■■□□□ 1.71
PCDHA5-202ENST00000529859 HNRNPUL2Q1KMD3 747 aaKnown RBP25.75■■□□□ 1.71
PCDHA5-202ENST00000529859 YTHDC1Q96MU7 727 aaKnown RBP25.72■■□□□ 1.71
PCDHA5-202ENST00000529859 TRIM26Q12899 539 aaPredicted RBP25.71■■□□□ 1.71
PCDHA5-202ENST00000529859 MYT1LQ9UL68 1186 aa25.7■■□□□ 1.71
PCDHA5-202ENST00000529859 ITGAEP38570 1179 aa25.62■■□□□ 1.69
PCDHA5-202ENST00000529859 POLR3GLQ9BT43 218 aa25.44■■□□□ 1.66
PCDHA5-202ENST00000529859 CHIC1Q5VXU3 224 aa25.42■■□□□ 1.66
PCDHA5-202ENST00000529859 LOC105371045A0A1W2PR82 267 aa25.41■■□□□ 1.66
PCDHA5-202ENST00000529859 HRCP23327 699 aa25.29■■□□□ 1.64
PCDHA5-202ENST00000529859 DAXXQ9UER7 740 aaPredicted RBP25.18■■□□□ 1.62
PCDHA5-202ENST00000529859 CNGB1Q14028 1251 aaPredicted RBP25.11■■□□□ 1.61
PCDHA5-202ENST00000529859 PABPN1Q86U42 306 aaKnown RBP eCLIP25.09■■□□□ 1.61
PCDHA5-202ENST00000529859 ABCC9O60706 1549 aa25.05■■□□□ 1.6
PCDHA5-202ENST00000529859 SLC4A1APQ9BWU0 796 aaKnown RBP25.04■■□□□ 1.6
PCDHA5-202ENST00000529859 MYT1Q01538 1121 aa25.01■■□□□ 1.59
PCDHA5-202ENST00000529859 FAM50AQ14320 339 aaKnown RBP25■■□□□ 1.59
PCDHA5-202ENST00000529859 TRIM52Q96A61 297 aa24.9■■□□□ 1.58
PCDHA5-202ENST00000529859 DIEXFQ68CQ4 756 aaKnown RBP24.77■■□□□ 1.56
PCDHA5-202ENST00000529859 FBLN2P98095 1184 aa24.71■■□□□ 1.55
PCDHA5-202ENST00000529859 NEUROD1Q13562 356 aa24.71■■□□□ 1.55
PCDHA5-202ENST00000529859 CLSPNQ9HAW4 1339 aa24.7■■□□□ 1.55
PCDHA5-202ENST00000529859 ZNF326Q5BKZ1 582 aaKnown RBP24.58■■□□□ 1.52
PCDHA5-202ENST00000529859 ZNF316A6NFI3 1004 aaPredicted RBP24.55■■□□□ 1.52
PCDHA5-202ENST00000529859 ANP32CO43423 234 aa24.48■■□□□ 1.51
PCDHA5-202ENST00000529859 RTL5Q5HYW3 569 aaPredicted RBP24.46■■□□□ 1.51
PCDHA5-202ENST00000529859 CSRNP3Q8WYN3 585 aa24.43■■□□□ 1.5
PCDHA5-202ENST00000529859 P3H3Q8IVL6 736 aa24.4■■□□□ 1.5
PCDHA5-202ENST00000529859 ZBTB47Q9UFB7 747 aaPredicted RBP24.35■■□□□ 1.49
PCDHA5-202ENST00000529859 ARID3CA6NKF2 412 aa24.33■■□□□ 1.49
PCDHA5-202ENST00000529859 CDK11AQ9UQ88 783 aaPredicted RBP24.32■■□□□ 1.48
PCDHA5-202ENST00000529859 BCANQ96GW7 911 aa24.29■■□□□ 1.48
PCDHA5-202ENST00000529859 ZNF777Q9ULD5 760 aaPredicted RBP24.26■■□□□ 1.47
PCDHA5-202ENST00000529859 NEFMP07197 916 aa24.26■■□□□ 1.47
PCDHA5-202ENST00000529859 SLC24A1O60721 1099 aa24.18■■□□□ 1.46
PCDHA5-202ENST00000529859 CANXP27824 592 aaKnown RBP24.17■■□□□ 1.46
PCDHA5-202ENST00000529859 ESF1Q9H501 851 aaKnown RBP24.1■■□□□ 1.45
PCDHA5-202ENST00000529859 GTF3C3Q9Y5Q9 886 aa24.09■■□□□ 1.45
PCDHA5-202ENST00000529859 SCRIBQ14160 1630 aa24.03■■□□□ 1.44
PCDHA5-202ENST00000529859 NPM1P06748 294 aaKnown RBP eCLIP24.01■■□□□ 1.43
PCDHA5-202ENST00000529859 BCL11AQ9H165 835 aa23.99■■□□□ 1.43
PCDHA5-202ENST00000529859 STAG3Q9UJ98 1225 aa23.95■■□□□ 1.42
PCDHA5-202ENST00000529859 CHGAP10645 457 aaKnown RBP23.94■■□□□ 1.42
PCDHA5-202ENST00000529859 TONSLQ96HA7 1378 aa23.93■■□□□ 1.42
PCDHA5-202ENST00000529859 ANP32AP39687 249 aaKnown RBP23.76■■□□□ 1.39
PCDHA5-202ENST00000529859 ZCCHC6Q5VYS8 1495 aaKnown RBP23.75■■□□□ 1.39
PCDHA5-202ENST00000529859 TSPY4P0CV99 314 aa23.75■■□□□ 1.39
PCDHA5-202ENST00000529859 TSPY10P0CW01 314 aa23.75■■□□□ 1.39
PCDHA5-202ENST00000529859 ACIN1Q9UKV3 1341 aaKnown RBP23.74■■□□□ 1.39
PCDHA5-202ENST00000529859 CHIC2Q9UKJ5 165 aa23.74■■□□□ 1.39
PCDHA5-202ENST00000529859 PLPPR3Q6T4P5 718 aa23.72■■□□□ 1.39
PCDHA5-202ENST00000529859 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.72■■□□□ 1.39
PCDHA5-202ENST00000529859 CHMP7Q8WUX9 453 aaPredicted RBP23.67■■□□□ 1.38
PCDHA5-202ENST00000529859 DDX10Q13206 875 aaKnown RBP23.67■■□□□ 1.38
PCDHA5-202ENST00000529859 HNRNPUQ00839 825 aaKnown RBP eCLIP23.66■■□□□ 1.38
PCDHA5-202ENST00000529859 MTUS2Q5JR59 1369 aa23.64■■□□□ 1.37
PCDHA5-202ENST00000529859 FAM9BQ8IZU0 186 aa23.63■■□□□ 1.37
PCDHA5-202ENST00000529859 NPM2Q86SE8 214 aaKnown RBP23.6■■□□□ 1.37
PCDHA5-202ENST00000529859 TMC1Q8TDI8 760 aa23.59■■□□□ 1.37
PCDHA5-202ENST00000529859 FKBP8Q14318 412 aa23.57■■□□□ 1.36
PCDHA5-202ENST00000529859 DCAF1Q9Y4B6 1507 aa23.55■■□□□ 1.36
PCDHA5-202ENST00000529859 UPF2Q9HAU5 1272 aaKnown RBP23.54■■□□□ 1.36
PCDHA5-202ENST00000529859 KDM2AQ9Y2K7 1162 aa23.54■■□□□ 1.36
PCDHA5-202ENST00000529859 SALL2Q9Y467 1007 aaPredicted RBP23.53■■□□□ 1.36
PCDHA5-202ENST00000529859 HSP90AA1P07900 732 aaKnown RBP23.53■■□□□ 1.36
PCDHA5-202ENST00000529859 WDR43Q15061 677 aaKnown RBP eCLIP23.5■■□□□ 1.35
PCDHA5-202ENST00000529859 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.49■■□□□ 1.35
PCDHA5-202ENST00000529859 CLIP1P30622 1438 aa23.46■■□□□ 1.35
PCDHA5-202ENST00000529859 MRS2Q9HD23 443 aa23.43■■□□□ 1.34
PCDHA5-202ENST00000529859 ANP32BQ92688 251 aaKnown RBP23.42■■□□□ 1.34
PCDHA5-202ENST00000529859 PLEKHD1A6NEE1 506 aa23.41■■□□□ 1.34
PCDHA5-202ENST00000529859 CCDC136Q96JN2 1154 aa23.38■■□□□ 1.33
PCDHA5-202ENST00000529859 KCNH8Q96L42 1107 aa23.38■■□□□ 1.33
PCDHA5-202ENST00000529859 RRP7BPQ9NSQ0 103 aa23.36■■□□□ 1.33
PCDHA5-202ENST00000529859 EIF4G2P78344 907 aaKnown RBP eCLIP23.36■■□□□ 1.33
PCDHA5-202ENST00000529859 RSF1Q96T23 1441 aaPredicted RBP23.36■■□□□ 1.33
PCDHA5-202ENST00000529859 CCDC180Q9P1Z9 1646 aa23.33■■□□□ 1.33
PCDHA5-202ENST00000529859 EEA1Q15075 1411 aa23.33■■□□□ 1.32
PCDHA5-202ENST00000529859 RB1CC1Q8TDY2 1594 aa23.32■■□□□ 1.32
PCDHA5-202ENST00000529859 PPP1R15AO75807 674 aaPredicted RBP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms