Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC12.31□□□□□ -0.44
APOC4P55056 AC021097.1-201ENST00000607902 574 ntBASIC12.31□□□□□ -0.44
APOC4P55056 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.31□□□□□ -0.44
APOC4P55056 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
APOC4P55056 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC12.31□□□□□ -0.44
APOC4P55056 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC12.31□□□□□ -0.44
APOC4P55056 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC4P55056 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC4P55056 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
APOC4P55056 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC12.31□□□□□ -0.44
APOC4P55056 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
APOC4P55056 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC4P55056 LINC00896-202ENST00000609602 2128 ntBASIC12.31□□□□□ -0.44
APOC4P55056 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC4P55056 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC12.31□□□□□ -0.44
APOC4P55056 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC4P55056 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC12.31□□□□□ -0.44
APOC4P55056 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC12.3□□□□□ -0.44
APOC4P55056 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
APOC4P55056 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
APOC4P55056 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
APOC4P55056 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
APOC4P55056 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
APOC4P55056 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
APOC4P55056 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC4P55056 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC12.3□□□□□ -0.44
APOC4P55056 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC12.3□□□□□ -0.44
APOC4P55056 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
APOC4P55056 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC12.3□□□□□ -0.44
APOC4P55056 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC4P55056 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC12.3□□□□□ -0.44
APOC4P55056 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
APOC4P55056 AC068587.6-202ENST00000641839 5619 ntBASIC12.3□□□□□ -0.44
APOC4P55056 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
APOC4P55056 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC4P55056 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC12.3□□□□□ -0.44
APOC4P55056 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC4P55056 PMS2P2-201ENST00000425039 1128 ntBASIC12.3□□□□□ -0.44
APOC4P55056 WDR53-204ENST00000433160 887 ntTSL 5 BASIC12.3□□□□□ -0.44
APOC4P55056 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC4P55056 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC12.3□□□□□ -0.44
APOC4P55056 IGHV3-62-201ENST00000520057 340 ntBASIC12.3□□□□□ -0.44
APOC4P55056 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC12.3□□□□□ -0.44
APOC4P55056 AL513210.1-201ENST00000629608 234 ntBASIC12.3□□□□□ -0.44
APOC4P55056 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
APOC4P55056 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC12.3□□□□□ -0.44
APOC4P55056 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC4P55056 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC4P55056 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
APOC4P55056 KRT18P28-201ENST00000453838 1332 ntBASIC12.3□□□□□ -0.44
APOC4P55056 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC12.3□□□□□ -0.44
APOC4P55056 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
APOC4P55056 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
APOC4P55056 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
APOC4P55056 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
APOC4P55056 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC4P55056 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC4P55056 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC4P55056 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC12.3□□□□□ -0.44
APOC4P55056 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC12.3□□□□□ -0.44
APOC4P55056 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC4P55056 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC4P55056 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC4P55056 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC4P55056 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC4P55056 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC4P55056 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC4P55056 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC4P55056 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC4P55056 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC4P55056 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOC4P55056 RHBDF1P1-201ENST00000427504 1941 ntBASIC12.29□□□□□ -0.44
APOC4P55056 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
APOC4P55056 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC4P55056 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
APOC4P55056 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC12.29□□□□□ -0.44
APOC4P55056 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC4P55056 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOC4P55056 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC12.29□□□□□ -0.44
APOC4P55056 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC4P55056 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC4P55056 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC4P55056 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
APOC4P55056 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOC4P55056 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC4P55056 STOM-202ENST00000347359 870 ntTSL 2 BASIC12.29□□□□□ -0.44
APOC4P55056 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC12.29□□□□□ -0.44
APOC4P55056 RNU1-129P-201ENST00000384064 167 ntBASIC12.29□□□□□ -0.44
APOC4P55056 LBH-203ENST00000404397 543 ntTSL 4 BASIC12.29□□□□□ -0.44
APOC4P55056 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC12.29□□□□□ -0.44
APOC4P55056 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC12.29□□□□□ -0.44
APOC4P55056 TFAMP1-201ENST00000412727 736 ntBASIC12.29□□□□□ -0.44
APOC4P55056 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.29□□□□□ -0.44
APOC4P55056 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC12.29□□□□□ -0.44
APOC4P55056 METTL21AP1-201ENST00000438852 635 ntBASIC12.29□□□□□ -0.44
APOC4P55056 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOC4P55056 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOC4P55056 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC4P55056 U1.21-201ENST00000580816 167 ntBASIC12.29□□□□□ -0.44
APOC4P55056 CYP2A7P1-201ENST00000595391 815 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms