RNA–Protein interactions for RNA: ENST00000404397.5

LBH-203, Transcript of limb bud and heart development, humanhuman

TSL 4 BASIC

Gene LBH, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBH-203ENST00000404397 NISCHQ9Y2I1 1504 aa41.84■■■■■ 4.29
LBH-203ENST00000404397 ABCC9O60706 1549 aa38.02■■■■□ 3.68
LBH-203ENST00000404397 CCDC180Q9P1Z9 1646 aa37.61■■■■□ 3.61
LBH-203ENST00000404397 DNAJC5BQ9UF47 199 aa36.02■■■■□ 3.36
LBH-203ENST00000404397 RB1CC1Q8TDY2 1594 aa36■■■■□ 3.35
LBH-203ENST00000404397 NACADO15069 1562 aa35.68■■■■□ 3.3
LBH-203ENST00000404397 DCAF8L2P0C7V8 631 aa35.61■■■■□ 3.29
LBH-203ENST00000404397 PABPN1Q86U42 306 aaKnown RBP eCLIP35.42■■■■□ 3.26
LBH-203ENST00000404397 UNC13AQ9UPW8 1703 aa35.2■■■■□ 3.23
LBH-203ENST00000404397 MYO15BQ96JP2 1530 aa35.04■■■■□ 3.2
LBH-203ENST00000404397 BICRAQ9NZM4 1560 aa34.98■■■■□ 3.19
LBH-203ENST00000404397 ZCCHC6Q5VYS8 1495 aaKnown RBP34.57■■■■□ 3.12
LBH-203ENST00000404397 DCAF1Q9Y4B6 1507 aa34.49■■■■□ 3.11
LBH-203ENST00000404397 SHROOM4Q9ULL8 1493 aa34.38■■■■□ 3.09
LBH-203ENST00000404397 SCRIBQ14160 1630 aa34.31■■■■□ 3.08
LBH-203ENST00000404397 CC2D2AQ9P2K1 1620 aa34.31■■■■□ 3.08
LBH-203ENST00000404397 CECR2Q9BXF3 1484 aa34.27■■■■□ 3.08
LBH-203ENST00000404397 EIF4G1Q04637 1599 aaKnown RBP34.14■■■■□ 3.06
LBH-203ENST00000404397 DNAJC5Q9H3Z4 198 aa33.28■■■□□ 2.92
LBH-203ENST00000404397 NCAPD3P42695 1498 aa32.96■■■□□ 2.87
LBH-203ENST00000404397 CUX2O14529 1486 aa32.84■■■□□ 2.85
LBH-203ENST00000404397 ERCC6Q03468 1493 aa32.84■■■□□ 2.85
LBH-203ENST00000404397 ATAD2BQ9ULI0 1458 aa32.82■■■□□ 2.84
LBH-203ENST00000404397 SMARCA4P51532 1647 aa32.69■■■□□ 2.82
LBH-203ENST00000404397 SMARCA2P51531 1590 aa32.68■■■□□ 2.82
LBH-203ENST00000404397 HMGXB3Q12766 1538 aa32.64■■■□□ 2.82
LBH-203ENST00000404397 NESP48681 1621 aa32.58■■■□□ 2.81
LBH-203ENST00000404397 BAZ1BQ9UIG0 1483 aaKnown RBP32.48■■■□□ 2.79
LBH-203ENST00000404397 BAZ1AQ9NRL2 1556 aaPredicted RBP32.47■■■□□ 2.79
LBH-203ENST00000404397 PEG3Q9GZU2 1588 aa32.34■■■□□ 2.77
LBH-203ENST00000404397 MROH2BQ7Z745 1585 aa32.25■■■□□ 2.75
LBH-203ENST00000404397 THOC2Q8NI27 1593 aaKnown RBP32.24■■■□□ 2.75
LBH-203ENST00000404397 LAMC3Q9Y6N6 1575 aa32.24■■■□□ 2.75
LBH-203ENST00000404397 KIF21AQ7Z4S6 1674 aa32.11■■■□□ 2.73
LBH-203ENST00000404397 PDS5BQ9NTI5 1447 aa32.1■■■□□ 2.73
LBH-203ENST00000404397 CADPSQ9ULU8 1353 aa31.96■■■□□ 2.71
LBH-203ENST00000404397 WIZO95785 1651 aa31.86■■■□□ 2.69
LBH-203ENST00000404397 MRC2Q9UBG0 1479 aa31.82■■■□□ 2.68
LBH-203ENST00000404397 TRIM41Q8WV44 630 aa31.74■■■□□ 2.67
LBH-203ENST00000404397 WDR62O43379 1518 aa31.74■■■□□ 2.67
LBH-203ENST00000404397 CEP164Q9UPV0 1460 aa31.64■■■□□ 2.66
LBH-203ENST00000404397 FANCD2Q9BXW9 1451 aa31.59■■■□□ 2.65
LBH-203ENST00000404397 CFTRP13569 1480 aa31.52■■■□□ 2.64
LBH-203ENST00000404397 RSF1Q96T23 1441 aaPredicted RBP31.48■■■□□ 2.63
LBH-203ENST00000404397 OSCARQ8IYS5 282 aa31.39■■■□□ 2.62
LBH-203ENST00000404397 TOP2AP11388 1531 aaKnown RBP31.38■■■□□ 2.61
LBH-203ENST00000404397 URB2Q14146 1524 aaKnown RBP31.35■■■□□ 2.61
LBH-203ENST00000404397 PRDM2Q13029 1718 aa31.12■■■□□ 2.57
LBH-203ENST00000404397 CCDC88BA6NC98 1476 aa31.09■■■□□ 2.57
LBH-203ENST00000404397 ZNF608Q9ULD9 1512 aaPredicted RBP31.03■■■□□ 2.56
LBH-203ENST00000404397 IFT140Q96RY7 1462 aa31.01■■■□□ 2.55
LBH-203ENST00000404397 TOPBP1Q92547 1522 aa30.95■■■□□ 2.55
LBH-203ENST00000404397 RIMBP3CA6NJZ7 1639 aa30.95■■■□□ 2.54
LBH-203ENST00000404397 RIMBP3BA6NNM3 1639 aa30.95■■■□□ 2.54
LBH-203ENST00000404397 RIMBP3Q9UFD9 1639 aa30.95■■■□□ 2.54
LBH-203ENST00000404397 ABCC8Q09428 1581 aa30.86■■■□□ 2.53
LBH-203ENST00000404397 ARHGEF11O15085 1522 aa30.81■■■□□ 2.52
LBH-203ENST00000404397 EIF4G3O43432 1585 aaKnown RBP30.79■■■□□ 2.52
LBH-203ENST00000404397 DNMBPQ6XZF7 1577 aa30.79■■■□□ 2.52
LBH-203ENST00000404397 AQRO60306 1485 aaKnown RBP eCLIP30.74■■■□□ 2.51
LBH-203ENST00000404397 CYB5RLQ6IPT4 315 aa30.72■■■□□ 2.51
LBH-203ENST00000404397 TARBP1Q13395 1621 aaKnown RBP30.69■■■□□ 2.5
LBH-203ENST00000404397 FBLN2P98095 1184 aa30.66■■■□□ 2.5
LBH-203ENST00000404397 CHD1O14646 1710 aa30.65■■■□□ 2.5
LBH-203ENST00000404397 POLA1P09884 1462 aaPredicted RBP30.62■■■□□ 2.49
LBH-203ENST00000404397 RAD54L2Q9Y4B4 1467 aa30.55■■■□□ 2.48
LBH-203ENST00000404397 SOGA1O94964 1423 aa30.52■■■□□ 2.48
LBH-203ENST00000404397 TDRD9Q8NDG6 1382 aaKnown RBP30.51■■■□□ 2.47
LBH-203ENST00000404397 ARAP1Q96P48 1450 aa30.49■■■□□ 2.47
LBH-203ENST00000404397 TRHP20396 242 aaPredicted RBP30.48■■■□□ 2.47
LBH-203ENST00000404397 FGD5Q6ZNL6 1462 aa30.38■■■□□ 2.45
LBH-203ENST00000404397 SNAPC4Q5SXM2 1469 aa30.38■■■□□ 2.45
LBH-203ENST00000404397 CHMP7Q8WUX9 453 aaPredicted RBP30.35■■■□□ 2.45
LBH-203ENST00000404397 CUX1P39880 1505 aa30.32■■■□□ 2.44
LBH-203ENST00000404397 WDR97A6NE52 1622 aa30.29■■■□□ 2.44
LBH-203ENST00000404397 CLASP1Q7Z460 1538 aa30.27■■■□□ 2.44
LBH-203ENST00000404397 MAGI1Q96QZ7 1491 aaPredicted RBP30.25■■■□□ 2.43
LBH-203ENST00000404397 GRIN2BQ13224 1484 aa30.25■■■□□ 2.43
LBH-203ENST00000404397 SYNJ1O43426 1573 aa30.23■■■□□ 2.43
LBH-203ENST00000404397 SYNJ2O15056 1496 aa30.18■■■□□ 2.42
LBH-203ENST00000404397 GAPVD1Q14C86 1478 aa30.12■■■□□ 2.41
LBH-203ENST00000404397 PBRM1Q86U86 1689 aa30.08■■■□□ 2.41
LBH-203ENST00000404397 ABCA10Q8WWZ4 1543 aa30■■■□□ 2.39
LBH-203ENST00000404397 ABCA5Q8WWZ7 1642 aa29.96■■■□□ 2.39
LBH-203ENST00000404397 SUPT5HO00267 1087 aaKnown RBP29.95■■■□□ 2.39
LBH-203ENST00000404397 WRNQ14191 1432 aaPredicted RBP eCLIP29.85■■■□□ 2.37
LBH-203ENST00000404397 GRIN2AQ12879 1464 aa29.85■■■□□ 2.37
LBH-203ENST00000404397 ERCC6L2Q5T890 1561 aa29.82■■■□□ 2.36
LBH-203ENST00000404397 AEBP2Q6ZN18 517 aaPredicted RBP29.81■■■□□ 2.36
LBH-203ENST00000404397 ADAMTS12P58397 1594 aa29.76■■■□□ 2.35
LBH-203ENST00000404397 CEP170Q5SW79 1584 aa29.76■■■□□ 2.35
LBH-203ENST00000404397 NUP160Q12769 1436 aa29.75■■■□□ 2.35
LBH-203ENST00000404397 TOP2BQ02880 1626 aa29.71■■■□□ 2.35
LBH-203ENST00000404397 BIVM-ERCC5R4GMW8 1640 aa29.71■■■□□ 2.35
LBH-203ENST00000404397 FHAD1B1AJZ9 1412 aa29.7■■■□□ 2.34
LBH-203ENST00000404397 SHROOM2Q13796 1616 aa29.64■■■□□ 2.34
LBH-203ENST00000404397 ERICH3Q5RHP9 1530 aa29.61■■■□□ 2.33
LBH-203ENST00000404397 JPH4Q96JJ6 628 aa29.54■■■□□ 2.32
LBH-203ENST00000404397 PRG4Q92954 1404 aaPredicted RBP29.54■■■□□ 2.32
LBH-203ENST00000404397 KIF13AQ9H1H9 1805 aa29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms