RNA–Protein interactions for RNA: ENST00000512649.1

SERF1A-207, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 2 BASIC

Gene SERF1A, Length 846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-207ENST00000512649 NISCHQ9Y2I1 1504 aa40.26■■■■■ 4.03
SERF1A-207ENST00000512649 CCDC180Q9P1Z9 1646 aa35.83■■■■□ 3.33
SERF1A-207ENST00000512649 ABCC9O60706 1549 aa35.47■■■■□ 3.27
SERF1A-207ENST00000512649 DCAF8L2P0C7V8 631 aa34.02■■■■□ 3.04
SERF1A-207ENST00000512649 RB1CC1Q8TDY2 1594 aa33.95■■■■□ 3.03
SERF1A-207ENST00000512649 NACADO15069 1562 aa33.83■■■■□ 3.01
SERF1A-207ENST00000512649 MYO15BQ96JP2 1530 aa33.48■■■□□ 2.95
SERF1A-207ENST00000512649 ZCCHC6Q5VYS8 1495 aaKnown RBP33.43■■■□□ 2.94
SERF1A-207ENST00000512649 DCAF1Q9Y4B6 1507 aa33.25■■■□□ 2.91
SERF1A-207ENST00000512649 PABPN1Q86U42 306 aaKnown RBP eCLIP33.17■■■□□ 2.9
SERF1A-207ENST00000512649 UNC13AQ9UPW8 1703 aa33.07■■■□□ 2.88
SERF1A-207ENST00000512649 BICRAQ9NZM4 1560 aa32.85■■■□□ 2.85
SERF1A-207ENST00000512649 DNAJC5BQ9UF47 199 aa32.8■■■□□ 2.84
SERF1A-207ENST00000512649 SCRIBQ14160 1630 aa32.76■■■□□ 2.83
SERF1A-207ENST00000512649 SHROOM4Q9ULL8 1493 aa32.5■■■□□ 2.79
SERF1A-207ENST00000512649 EIF4G1Q04637 1599 aaKnown RBP32.06■■■□□ 2.72
SERF1A-207ENST00000512649 CC2D2AQ9P2K1 1620 aa32.01■■■□□ 2.72
SERF1A-207ENST00000512649 CECR2Q9BXF3 1484 aa31.9■■■□□ 2.7
SERF1A-207ENST00000512649 SMARCA4P51532 1647 aa31.27■■■□□ 2.6
SERF1A-207ENST00000512649 BAZ1AQ9NRL2 1556 aaPredicted RBP31.23■■■□□ 2.59
SERF1A-207ENST00000512649 NCAPD3P42695 1498 aa31.23■■■□□ 2.59
SERF1A-207ENST00000512649 ATAD2BQ9ULI0 1458 aa31.21■■■□□ 2.59
SERF1A-207ENST00000512649 SMARCA2P51531 1590 aa31.16■■■□□ 2.58
SERF1A-207ENST00000512649 MROH2BQ7Z745 1585 aa31.01■■■□□ 2.56
SERF1A-207ENST00000512649 HMGXB3Q12766 1538 aa31■■■□□ 2.55
SERF1A-207ENST00000512649 BAZ1BQ9UIG0 1483 aaKnown RBP30.97■■■□□ 2.55
SERF1A-207ENST00000512649 PEG3Q9GZU2 1588 aa30.92■■■□□ 2.54
SERF1A-207ENST00000512649 WIZO95785 1651 aa30.67■■■□□ 2.5
SERF1A-207ENST00000512649 ERCC6Q03468 1493 aa30.64■■■□□ 2.5
SERF1A-207ENST00000512649 RSF1Q96T23 1441 aaPredicted RBP30.59■■■□□ 2.49
SERF1A-207ENST00000512649 NESP48681 1621 aa30.57■■■□□ 2.48
SERF1A-207ENST00000512649 LAMC3Q9Y6N6 1575 aa30.44■■■□□ 2.46
SERF1A-207ENST00000512649 CADPSQ9ULU8 1353 aa30.36■■■□□ 2.45
SERF1A-207ENST00000512649 CUX2O14529 1486 aa30.33■■■□□ 2.45
SERF1A-207ENST00000512649 PDS5BQ9NTI5 1447 aa30.33■■■□□ 2.45
SERF1A-207ENST00000512649 TOP2AP11388 1531 aaKnown RBP30.32■■■□□ 2.44
SERF1A-207ENST00000512649 KIF21AQ7Z4S6 1674 aa30.15■■■□□ 2.42
SERF1A-207ENST00000512649 THOC2Q8NI27 1593 aaKnown RBP30.08■■■□□ 2.41
SERF1A-207ENST00000512649 CFTRP13569 1480 aa30.06■■■□□ 2.4
SERF1A-207ENST00000512649 CCDC88BA6NC98 1476 aa30.01■■■□□ 2.4
SERF1A-207ENST00000512649 FANCD2Q9BXW9 1451 aa29.99■■■□□ 2.39
SERF1A-207ENST00000512649 MRC2Q9UBG0 1479 aa29.98■■■□□ 2.39
SERF1A-207ENST00000512649 CEP164Q9UPV0 1460 aa29.98■■■□□ 2.39
SERF1A-207ENST00000512649 WDR62O43379 1518 aa29.83■■■□□ 2.37
SERF1A-207ENST00000512649 DNAJC5Q9H3Z4 198 aa29.81■■■□□ 2.36
SERF1A-207ENST00000512649 SUPT5HO00267 1087 aaKnown RBP29.79■■■□□ 2.36
SERF1A-207ENST00000512649 PRDM2Q13029 1718 aa29.73■■■□□ 2.35
SERF1A-207ENST00000512649 URB2Q14146 1524 aaKnown RBP29.66■■■□□ 2.34
SERF1A-207ENST00000512649 ABCC8Q09428 1581 aa29.48■■■□□ 2.31
SERF1A-207ENST00000512649 TOPBP1Q92547 1522 aa29.45■■■□□ 2.3
SERF1A-207ENST00000512649 DNMBPQ6XZF7 1577 aa29.38■■■□□ 2.29
SERF1A-207ENST00000512649 IFT140Q96RY7 1462 aa29.36■■■□□ 2.29
SERF1A-207ENST00000512649 ZNF608Q9ULD9 1512 aaPredicted RBP29.23■■■□□ 2.27
SERF1A-207ENST00000512649 POLA1P09884 1462 aaPredicted RBP29.17■■■□□ 2.26
SERF1A-207ENST00000512649 OSCARQ8IYS5 282 aa29.17■■■□□ 2.26
SERF1A-207ENST00000512649 SOGA1O94964 1423 aa29.13■■■□□ 2.25
SERF1A-207ENST00000512649 CUX1P39880 1505 aa29.11■■■□□ 2.25
SERF1A-207ENST00000512649 RAD54L2Q9Y4B4 1467 aa29.1■■■□□ 2.25
SERF1A-207ENST00000512649 TARBP1Q13395 1621 aaKnown RBP29.09■■■□□ 2.25
SERF1A-207ENST00000512649 AQRO60306 1485 aaKnown RBP eCLIP29.08■■■□□ 2.25
SERF1A-207ENST00000512649 FGD5Q6ZNL6 1462 aa29.08■■■□□ 2.25
SERF1A-207ENST00000512649 EIF4G3O43432 1585 aaKnown RBP29.05■■■□□ 2.24
SERF1A-207ENST00000512649 TDRD9Q8NDG6 1382 aaKnown RBP29.01■■■□□ 2.23
SERF1A-207ENST00000512649 FBLN2P98095 1184 aa28.93■■■□□ 2.22
SERF1A-207ENST00000512649 WRNQ14191 1432 aaPredicted RBP eCLIP28.88■■■□□ 2.21
SERF1A-207ENST00000512649 WDR97A6NE52 1622 aa28.87■■■□□ 2.21
SERF1A-207ENST00000512649 TRIM41Q8WV44 630 aa28.81■■■□□ 2.2
SERF1A-207ENST00000512649 GRIN2BQ13224 1484 aa28.79■■■□□ 2.2
SERF1A-207ENST00000512649 CHMP7Q8WUX9 453 aaPredicted RBP28.78■■■□□ 2.2
SERF1A-207ENST00000512649 TOP2BQ02880 1626 aa28.78■■■□□ 2.2
SERF1A-207ENST00000512649 SNAPC4Q5SXM2 1469 aa28.78■■■□□ 2.2
SERF1A-207ENST00000512649 ABCA10Q8WWZ4 1543 aa28.77■■■□□ 2.2
SERF1A-207ENST00000512649 GAPVD1Q14C86 1478 aa28.77■■■□□ 2.2
SERF1A-207ENST00000512649 AEBP2Q6ZN18 517 aaPredicted RBP28.75■■■□□ 2.19
SERF1A-207ENST00000512649 BIVM-ERCC5R4GMW8 1640 aa28.75■■■□□ 2.19
SERF1A-207ENST00000512649 SYNJ1O43426 1573 aa28.75■■■□□ 2.19
SERF1A-207ENST00000512649 CHD1O14646 1710 aa28.74■■■□□ 2.19
SERF1A-207ENST00000512649 MAGI1Q96QZ7 1491 aaPredicted RBP28.72■■■□□ 2.19
SERF1A-207ENST00000512649 PBRM1Q86U86 1689 aa28.63■■■□□ 2.17
SERF1A-207ENST00000512649 ABCA5Q8WWZ7 1642 aa28.62■■■□□ 2.17
SERF1A-207ENST00000512649 SYNJ2O15056 1496 aa28.62■■■□□ 2.17
SERF1A-207ENST00000512649 RIMBP3CA6NJZ7 1639 aa28.58■■■□□ 2.17
SERF1A-207ENST00000512649 RIMBP3BA6NNM3 1639 aa28.58■■■□□ 2.17
SERF1A-207ENST00000512649 RIMBP3Q9UFD9 1639 aa28.58■■■□□ 2.17
SERF1A-207ENST00000512649 ARHGEF11O15085 1522 aa28.55■■■□□ 2.16
SERF1A-207ENST00000512649 CYB5RLQ6IPT4 315 aa28.46■■■□□ 2.15
SERF1A-207ENST00000512649 ERICH3Q5RHP9 1530 aa28.43■■■□□ 2.14
SERF1A-207ENST00000512649 CLASP1Q7Z460 1538 aa28.42■■■□□ 2.14
SERF1A-207ENST00000512649 FHAD1B1AJZ9 1412 aa28.42■■■□□ 2.14
SERF1A-207ENST00000512649 ADAMTS12P58397 1594 aa28.39■■■□□ 2.14
SERF1A-207ENST00000512649 GRIN2AQ12879 1464 aa28.39■■■□□ 2.13
SERF1A-207ENST00000512649 KIF27Q86VH2 1401 aa28.33■■■□□ 2.13
SERF1A-207ENST00000512649 ARAP1Q96P48 1450 aa28.29■■■□□ 2.12
SERF1A-207ENST00000512649 NUP160Q12769 1436 aa28.26■■■□□ 2.11
SERF1A-207ENST00000512649 IGF1RP08069 1367 aa28.24■■■□□ 2.11
SERF1A-207ENST00000512649 CEP170Q5SW79 1584 aa28.21■■■□□ 2.11
SERF1A-207ENST00000512649 JPH4Q96JJ6 628 aa28.1■■■□□ 2.09
SERF1A-207ENST00000512649 CARMIL1Q5VZK9 1371 aa28.1■■■□□ 2.09
SERF1A-207ENST00000512649 CUL7Q14999 1698 aa28.1■■■□□ 2.09
SERF1A-207ENST00000512649 TRHP20396 242 aaPredicted RBP28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms