RNA–Protein interactions for RNA: ENST00000548115.5

TFCP2-204, Transcript of transcription factor CP2, humanhuman

TSL 5 BASIC

Gene TFCP2, Length 1,862 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2-204ENST00000548115 NISCHQ9Y2I1 1504 aa37.35■■■■□ 3.57
TFCP2-204ENST00000548115 CCDC180Q9P1Z9 1646 aa32.67■■■□□ 2.82
TFCP2-204ENST00000548115 ZCCHC6Q5VYS8 1495 aaKnown RBP31.34■■■□□ 2.61
TFCP2-204ENST00000548115 SHROOM4Q9ULL8 1493 aa31.33■■■□□ 2.61
TFCP2-204ENST00000548115 SUPT5HO00267 1087 aaKnown RBP30.99■■■□□ 2.55
TFCP2-204ENST00000548115 ABCC9O60706 1549 aa30.94■■■□□ 2.54
TFCP2-204ENST00000548115 DCAF1Q9Y4B6 1507 aa30.93■■■□□ 2.54
TFCP2-204ENST00000548115 DCAF8L2P0C7V8 631 aa30.9■■■□□ 2.54
TFCP2-204ENST00000548115 MYO15BQ96JP2 1530 aa30.63■■■□□ 2.49
TFCP2-204ENST00000548115 CHIC1Q5VXU3 224 aa30.48■■■□□ 2.47
TFCP2-204ENST00000548115 NACADO15069 1562 aa30.47■■■□□ 2.47
TFCP2-204ENST00000548115 HRCP23327 699 aa30.35■■■□□ 2.45
TFCP2-204ENST00000548115 RB1CC1Q8TDY2 1594 aa30.24■■■□□ 2.43
TFCP2-204ENST00000548115 SCRIBQ14160 1630 aa29.96■■■□□ 2.39
TFCP2-204ENST00000548115 PCGF6Q9BYE7 350 aa29.89■■■□□ 2.37
TFCP2-204ENST00000548115 UNC13AQ9UPW8 1703 aa29.54■■■□□ 2.32
TFCP2-204ENST00000548115 LOC105371045A0A1W2PR82 267 aa29.47■■■□□ 2.31
TFCP2-204ENST00000548115 PPARGC1BQ86YN6 1023 aaKnown RBP29.41■■■□□ 2.3
TFCP2-204ENST00000548115 TRIM26Q12899 539 aaPredicted RBP29.4■■■□□ 2.3
TFCP2-204ENST00000548115 BICRAQ9NZM4 1560 aa29.24■■■□□ 2.27
TFCP2-204ENST00000548115 RSF1Q96T23 1441 aaPredicted RBP29.17■■■□□ 2.26
TFCP2-204ENST00000548115 PABPN1Q86U42 306 aaKnown RBP eCLIP29.14■■■□□ 2.26
TFCP2-204ENST00000548115 ZEB1P37275 1124 aaPredicted RBP29.09■■■□□ 2.25
TFCP2-204ENST00000548115 CECR2Q9BXF3 1484 aa28.97■■■□□ 2.23
TFCP2-204ENST00000548115 TRIM41Q8WV44 630 aa28.95■■■□□ 2.22
TFCP2-204ENST00000548115 BAZ1AQ9NRL2 1556 aaPredicted RBP28.89■■■□□ 2.22
TFCP2-204ENST00000548115 MROH2BQ7Z745 1585 aa28.81■■■□□ 2.2
TFCP2-204ENST00000548115 SMARCA4P51532 1647 aa28.74■■■□□ 2.19
TFCP2-204ENST00000548115 FAM9AQ8IZU1 332 aaPredicted RBP28.57■■■□□ 2.16
TFCP2-204ENST00000548115 WIZO95785 1651 aa28.57■■■□□ 2.16
TFCP2-204ENST00000548115 PELP1Q8IZL8 1130 aaKnown RBP28.41■■■□□ 2.14
TFCP2-204ENST00000548115 EIF4G1Q04637 1599 aaKnown RBP28.41■■■□□ 2.14
TFCP2-204ENST00000548115 PEG3Q9GZU2 1588 aa28.41■■■□□ 2.14
TFCP2-204ENST00000548115 SMARCA2P51531 1590 aa28.33■■■□□ 2.13
TFCP2-204ENST00000548115 TOP2AP11388 1531 aaKnown RBP28.31■■■□□ 2.12
TFCP2-204ENST00000548115 ATAD2BQ9ULI0 1458 aa28.3■■■□□ 2.12
TFCP2-204ENST00000548115 EHMT2Q96KQ7 1210 aa28.18■■■□□ 2.1
TFCP2-204ENST00000548115 BAZ1BQ9UIG0 1483 aaKnown RBP28.16■■■□□ 2.1
TFCP2-204ENST00000548115 SCAF1Q9H7N4 1312 aaKnown RBP28.13■■■□□ 2.09
TFCP2-204ENST00000548115 NCAPD3P42695 1498 aa28.1■■■□□ 2.09
TFCP2-204ENST00000548115 HMGXB3Q12766 1538 aa28.06■■■□□ 2.08
TFCP2-204ENST00000548115 WRNQ14191 1432 aaPredicted RBP eCLIP28.02■■■□□ 2.08
TFCP2-204ENST00000548115 CC2D2AQ9P2K1 1620 aa28.02■■■□□ 2.08
TFCP2-204ENST00000548115 CCDC88BA6NC98 1476 aa28■■■□□ 2.07
TFCP2-204ENST00000548115 CCER1Q8TC90 406 aaPredicted RBP28■■■□□ 2.07
TFCP2-204ENST00000548115 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.94■■■□□ 2.06
TFCP2-204ENST00000548115 ACIN1Q9UKV3 1341 aaKnown RBP27.84■■■□□ 2.05
TFCP2-204ENST00000548115 EEA1Q15075 1411 aa27.84■■■□□ 2.05
TFCP2-204ENST00000548115 TNIKQ9UKE5 1360 aa27.83■■■□□ 2.05
TFCP2-204ENST00000548115 ABCC8Q09428 1581 aa27.83■■■□□ 2.05
TFCP2-204ENST00000548115 CEP162Q5TB80 1403 aa27.8■■■□□ 2.04
TFCP2-204ENST00000548115 DIEXFQ68CQ4 756 aaKnown RBP27.72■■■□□ 2.03
TFCP2-204ENST00000548115 CENPBP07199 599 aaPredicted RBP27.68■■■□□ 2.02
TFCP2-204ENST00000548115 SOGA1O94964 1423 aa27.66■■■□□ 2.02
TFCP2-204ENST00000548115 NEUROD1Q13562 356 aa27.65■■■□□ 2.02
TFCP2-204ENST00000548115 CSRNP3Q8WYN3 585 aa27.65■■■□□ 2.02
TFCP2-204ENST00000548115 GOLGA3Q08378 1498 aa27.57■■■□□ 2
TFCP2-204ENST00000548115 UBTFP17480 764 aaKnown RBP27.49■■□□□ 1.99
TFCP2-204ENST00000548115 RUSC2Q8N2Y8 1516 aa27.48■■□□□ 1.99
TFCP2-204ENST00000548115 ZNF316A6NFI3 1004 aaPredicted RBP27.48■■□□□ 1.99
TFCP2-204ENST00000548115 GTF3C3Q9Y5Q9 886 aa27.44■■□□□ 1.98
TFCP2-204ENST00000548115 CFTRP13569 1480 aa27.43■■□□□ 1.98
TFCP2-204ENST00000548115 TTBK1Q5TCY1 1321 aaPredicted RBP27.42■■□□□ 1.98
TFCP2-204ENST00000548115 KIF21BO75037 1637 aa27.39■■□□□ 1.98
TFCP2-204ENST00000548115 CADPSQ9ULU8 1353 aa27.38■■□□□ 1.97
TFCP2-204ENST00000548115 CEP164Q9UPV0 1460 aa27.37■■□□□ 1.97
TFCP2-204ENST00000548115 DNAJC5BQ9UF47 199 aa27.34■■□□□ 1.97
TFCP2-204ENST00000548115 PRDM2Q13029 1718 aa27.3■■□□□ 1.96
TFCP2-204ENST00000548115 SYNJ1O43426 1573 aa27.22■■□□□ 1.95
TFCP2-204ENST00000548115 CLIP1P30622 1438 aa27.21■■□□□ 1.95
TFCP2-204ENST00000548115 VPS8Q8N3P4 1428 aa27.2■■□□□ 1.94
TFCP2-204ENST00000548115 MYT1Q01538 1121 aa27.19■■□□□ 1.94
TFCP2-204ENST00000548115 LAMC3Q9Y6N6 1575 aa27.19■■□□□ 1.94
TFCP2-204ENST00000548115 NESP48681 1621 aa27.09■■□□□ 1.93
TFCP2-204ENST00000548115 HNRNPUL2Q1KMD3 747 aaKnown RBP27.08■■□□□ 1.93
TFCP2-204ENST00000548115 APLP2Q06481 763 aa27.08■■□□□ 1.93
TFCP2-204ENST00000548115 FANCD2Q9BXW9 1451 aa27.06■■□□□ 1.92
TFCP2-204ENST00000548115 TOP2BQ02880 1626 aa27.03■■□□□ 1.92
TFCP2-204ENST00000548115 MIER1Q8N108 512 aa27.02■■□□□ 1.92
TFCP2-204ENST00000548115 BIVM-ERCC5R4GMW8 1640 aa27■■□□□ 1.91
TFCP2-204ENST00000548115 PDS5BQ9NTI5 1447 aa27■■□□□ 1.91
TFCP2-204ENST00000548115 RAPGEF2Q9Y4G8 1499 aa26.99■■□□□ 1.91
TFCP2-204ENST00000548115 CLSPNQ9HAW4 1339 aa26.98■■□□□ 1.91
TFCP2-204ENST00000548115 CUX1P39880 1505 aa26.96■■□□□ 1.91
TFCP2-204ENST00000548115 YTHDC1Q96MU7 727 aaKnown RBP26.93■■□□□ 1.9
TFCP2-204ENST00000548115 ERICH3Q5RHP9 1530 aa26.89■■□□□ 1.89
TFCP2-204ENST00000548115 DNMBPQ6XZF7 1577 aa26.8■■□□□ 1.88
TFCP2-204ENST00000548115 KIF21AQ7Z4S6 1674 aa26.8■■□□□ 1.88
TFCP2-204ENST00000548115 PRXQ9BXM0 1461 aa26.77■■□□□ 1.88
TFCP2-204ENST00000548115 DHX57Q6P158 1386 aaKnown RBP26.75■■□□□ 1.87
TFCP2-204ENST00000548115 TOPBP1Q92547 1522 aa26.74■■□□□ 1.87
TFCP2-204ENST00000548115 ARAP1Q96P48 1450 aa26.73■■□□□ 1.87
TFCP2-204ENST00000548115 FGD5Q6ZNL6 1462 aa26.7■■□□□ 1.87
TFCP2-204ENST00000548115 URB2Q14146 1524 aaKnown RBP26.69■■□□□ 1.86
TFCP2-204ENST00000548115 RRBP1Q9P2E9 1410 aaKnown RBP26.65■■□□□ 1.86
TFCP2-204ENST00000548115 RANGAP1P46060 587 aaPredicted RBP26.63■■□□□ 1.85
TFCP2-204ENST00000548115 CUX2O14529 1486 aa26.63■■□□□ 1.85
TFCP2-204ENST00000548115 MRC2Q9UBG0 1479 aa26.62■■□□□ 1.85
TFCP2-204ENST00000548115 ERCC6Q03468 1493 aa26.61■■□□□ 1.85
TFCP2-204ENST00000548115 KIF27Q86VH2 1401 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms