RNA–Protein interactions for RNA: ENST00000543106.6

RPH3A-203, Transcript of rabphilin 3A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RPH3A, Length 2,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-203ENST00000543106 NISCHQ9Y2I1 1504 aa37.71■■■■□ 3.63
RPH3A-203ENST00000543106 CCDC180Q9P1Z9 1646 aa32.3■■■□□ 2.76
RPH3A-203ENST00000543106 SHROOM4Q9ULL8 1493 aa32.18■■■□□ 2.74
RPH3A-203ENST00000543106 SUPT5HO00267 1087 aaKnown RBP31.95■■■□□ 2.71
RPH3A-203ENST00000543106 HRCP23327 699 aa31.84■■■□□ 2.69
RPH3A-203ENST00000543106 ZCCHC6Q5VYS8 1495 aaKnown RBP31.77■■■□□ 2.68
RPH3A-203ENST00000543106 DCAF8L2P0C7V8 631 aa31.5■■■□□ 2.63
RPH3A-203ENST00000543106 MYO15BQ96JP2 1530 aa31.46■■■□□ 2.63
RPH3A-203ENST00000543106 PCGF6Q9BYE7 350 aa31.4■■■□□ 2.62
RPH3A-203ENST00000543106 PPARGC1BQ86YN6 1023 aaKnown RBP31.31■■■□□ 2.6
RPH3A-203ENST00000543106 CHIC1Q5VXU3 224 aa31.3■■■□□ 2.6
RPH3A-203ENST00000543106 DCAF1Q9Y4B6 1507 aa30.92■■■□□ 2.54
RPH3A-203ENST00000543106 LOC105371045A0A1W2PR82 267 aa30.63■■■□□ 2.49
RPH3A-203ENST00000543106 ABCC9O60706 1549 aa30.52■■■□□ 2.48
RPH3A-203ENST00000543106 TRIM26Q12899 539 aaPredicted RBP30.37■■■□□ 2.45
RPH3A-203ENST00000543106 SCRIBQ14160 1630 aa30.21■■■□□ 2.43
RPH3A-203ENST00000543106 PELP1Q8IZL8 1130 aaKnown RBP30.16■■■□□ 2.42
RPH3A-203ENST00000543106 NACADO15069 1562 aa30.03■■■□□ 2.4
RPH3A-203ENST00000543106 SCAF1Q9H7N4 1312 aaKnown RBP30.02■■■□□ 2.4
RPH3A-203ENST00000543106 ZEB1P37275 1124 aaPredicted RBP29.97■■■□□ 2.39
RPH3A-203ENST00000543106 RB1CC1Q8TDY2 1594 aa29.68■■■□□ 2.34
RPH3A-203ENST00000543106 RSF1Q96T23 1441 aaPredicted RBP29.63■■■□□ 2.33
RPH3A-203ENST00000543106 FAM9AQ8IZU1 332 aaPredicted RBP29.58■■■□□ 2.33
RPH3A-203ENST00000543106 TRIM41Q8WV44 630 aa29.53■■■□□ 2.32
RPH3A-203ENST00000543106 EHMT2Q96KQ7 1210 aa29.51■■■□□ 2.31
RPH3A-203ENST00000543106 CECR2Q9BXF3 1484 aa29.49■■■□□ 2.31
RPH3A-203ENST00000543106 ACIN1Q9UKV3 1341 aaKnown RBP29.32■■■□□ 2.28
RPH3A-203ENST00000543106 NEUROD1Q13562 356 aa29.31■■■□□ 2.28
RPH3A-203ENST00000543106 MROH2BQ7Z745 1585 aa29.3■■■□□ 2.28
RPH3A-203ENST00000543106 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.21■■■□□ 2.27
RPH3A-203ENST00000543106 UNC13AQ9UPW8 1703 aa29.2■■■□□ 2.27
RPH3A-203ENST00000543106 GTF3C3Q9Y5Q9 886 aa29.11■■■□□ 2.25
RPH3A-203ENST00000543106 CCER1Q8TC90 406 aaPredicted RBP29.1■■■□□ 2.25
RPH3A-203ENST00000543106 PABPN1Q86U42 306 aaKnown RBP eCLIP29.09■■■□□ 2.25
RPH3A-203ENST00000543106 WIZO95785 1651 aa29.09■■■□□ 2.25
RPH3A-203ENST00000543106 BAZ1AQ9NRL2 1556 aaPredicted RBP29■■■□□ 2.23
RPH3A-203ENST00000543106 DIEXFQ68CQ4 756 aaKnown RBP28.99■■■□□ 2.23
RPH3A-203ENST00000543106 CENPBP07199 599 aaPredicted RBP28.94■■■□□ 2.22
RPH3A-203ENST00000543106 BICRAQ9NZM4 1560 aa28.92■■■□□ 2.22
RPH3A-203ENST00000543106 SMARCA4P51532 1647 aa28.83■■■□□ 2.21
RPH3A-203ENST00000543106 MYT1Q01538 1121 aa28.83■■■□□ 2.21
RPH3A-203ENST00000543106 TTBK1Q5TCY1 1321 aaPredicted RBP28.74■■■□□ 2.19
RPH3A-203ENST00000543106 TOP2AP11388 1531 aaKnown RBP28.62■■■□□ 2.17
RPH3A-203ENST00000543106 YTHDC1Q96MU7 727 aaKnown RBP28.57■■■□□ 2.16
RPH3A-203ENST00000543106 CCDC88BA6NC98 1476 aa28.51■■■□□ 2.16
RPH3A-203ENST00000543106 ZNF316A6NFI3 1004 aaPredicted RBP28.48■■■□□ 2.15
RPH3A-203ENST00000543106 SMARCA2P51531 1590 aa28.45■■■□□ 2.15
RPH3A-203ENST00000543106 EIF4G1Q04637 1599 aaKnown RBP28.41■■■□□ 2.14
RPH3A-203ENST00000543106 WRNQ14191 1432 aaPredicted RBP eCLIP28.32■■■□□ 2.12
RPH3A-203ENST00000543106 MIER1Q8N108 512 aa28.32■■■□□ 2.12
RPH3A-203ENST00000543106 PEG3Q9GZU2 1588 aa28.3■■■□□ 2.12
RPH3A-203ENST00000543106 ATAD2BQ9ULI0 1458 aa28.27■■■□□ 2.12
RPH3A-203ENST00000543106 CEP162Q5TB80 1403 aa28.27■■■□□ 2.12
RPH3A-203ENST00000543106 ABCC8Q09428 1581 aa28.24■■■□□ 2.11
RPH3A-203ENST00000543106 BAZ1BQ9UIG0 1483 aaKnown RBP28.15■■■□□ 2.1
RPH3A-203ENST00000543106 SOGA1O94964 1423 aa28.08■■■□□ 2.09
RPH3A-203ENST00000543106 TNIKQ9UKE5 1360 aa28.07■■■□□ 2.08
RPH3A-203ENST00000543106 UBTFP17480 764 aaKnown RBP28.06■■■□□ 2.08
RPH3A-203ENST00000543106 HNRNPUL2Q1KMD3 747 aaKnown RBP28.06■■■□□ 2.08
RPH3A-203ENST00000543106 CSRNP3Q8WYN3 585 aa27.95■■■□□ 2.06
RPH3A-203ENST00000543106 RUSC2Q8N2Y8 1516 aa27.93■■■□□ 2.06
RPH3A-203ENST00000543106 NCAPD3P42695 1498 aa27.83■■■□□ 2.05
RPH3A-203ENST00000543106 SUPT16HQ9Y5B9 1047 aaKnown RBP27.75■■■□□ 2.03
RPH3A-203ENST00000543106 HMGXB3Q12766 1538 aa27.74■■■□□ 2.03
RPH3A-203ENST00000543106 GOLGA3Q08378 1498 aa27.73■■■□□ 2.03
RPH3A-203ENST00000543106 EEA1Q15075 1411 aa27.73■■■□□ 2.03
RPH3A-203ENST00000543106 SYNJ1O43426 1573 aa27.71■■■□□ 2.03
RPH3A-203ENST00000543106 TSHZ2Q9NRE2 1034 aa27.57■■■□□ 2
RPH3A-203ENST00000543106 CLIP1P30622 1438 aa27.55■■■□□ 2
RPH3A-203ENST00000543106 RANGAP1P46060 587 aaPredicted RBP27.54■■■□□ 2
RPH3A-203ENST00000543106 APLP2Q06481 763 aa27.54■■■□□ 2
RPH3A-203ENST00000543106 CLSPNQ9HAW4 1339 aa27.53■■■□□ 2
RPH3A-203ENST00000543106 VPS8Q8N3P4 1428 aa27.48■■□□□ 1.99
RPH3A-203ENST00000543106 CEP164Q9UPV0 1460 aa27.46■■□□□ 1.99
RPH3A-203ENST00000543106 CC2D2AQ9P2K1 1620 aa27.46■■□□□ 1.99
RPH3A-203ENST00000543106 ANP32EQ9BTT0 268 aa27.45■■□□□ 1.98
RPH3A-203ENST00000543106 CFTRP13569 1480 aa27.43■■□□□ 1.98
RPH3A-203ENST00000543106 DHX57Q6P158 1386 aaKnown RBP27.41■■□□□ 1.98
RPH3A-203ENST00000543106 TOP2BQ02880 1626 aa27.41■■□□□ 1.98
RPH3A-203ENST00000543106 KIF21BO75037 1637 aa27.34■■□□□ 1.97
RPH3A-203ENST00000543106 KCNH8Q96L42 1107 aa27.32■■□□□ 1.96
RPH3A-203ENST00000543106 CUX1P39880 1505 aa27.31■■□□□ 1.96
RPH3A-203ENST00000543106 BIVM-ERCC5R4GMW8 1640 aa27.3■■□□□ 1.96
RPH3A-203ENST00000543106 RAPGEF2Q9Y4G8 1499 aa27.29■■□□□ 1.96
RPH3A-203ENST00000543106 BCANQ96GW7 911 aa27.28■■□□□ 1.96
RPH3A-203ENST00000543106 CADPSQ9ULU8 1353 aa27.26■■□□□ 1.95
RPH3A-203ENST00000543106 BCL11AQ9H165 835 aa27.22■■□□□ 1.95
RPH3A-203ENST00000543106 KANK4Q5T7N3 995 aaPredicted RBP27.17■■□□□ 1.94
RPH3A-203ENST00000543106 FKBP8Q14318 412 aa27.11■■□□□ 1.93
RPH3A-203ENST00000543106 PRDM2Q13029 1718 aa27.08■■□□□ 1.93
RPH3A-203ENST00000543106 DNAJC5BQ9UF47 199 aa27.05■■□□□ 1.92
RPH3A-203ENST00000543106 ITGAEP38570 1179 aa27.04■■□□□ 1.92
RPH3A-203ENST00000543106 NESP48681 1621 aa27.02■■□□□ 1.92
RPH3A-203ENST00000543106 KIF27Q86VH2 1401 aa27.02■■□□□ 1.92
RPH3A-203ENST00000543106 PRXQ9BXM0 1461 aa27■■□□□ 1.91
RPH3A-203ENST00000543106 FANCD2Q9BXW9 1451 aa26.98■■□□□ 1.91
RPH3A-203ENST00000543106 ARAP1Q96P48 1450 aa26.97■■□□□ 1.91
RPH3A-203ENST00000543106 RBM19Q9Y4C8 960 aaKnown RBP26.95■■□□□ 1.9
RPH3A-203ENST00000543106 DDX10Q13206 875 aaKnown RBP26.94■■□□□ 1.9
RPH3A-203ENST00000543106 RRBP1Q9P2E9 1410 aaKnown RBP26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms