RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 DCAF8L2P0C7V8 631 aa26.77■■□□□ 1.88
ALK-201ENST00000389048 EHMT2Q96KQ7 1210 aa25.56■■□□□ 1.68
ALK-201ENST00000389048 SUPT5HO00267 1087 aaKnown RBP25.42■■□□□ 1.66
ALK-201ENST00000389048 PELP1Q8IZL8 1130 aaKnown RBP24.87■■□□□ 1.57
ALK-201ENST00000389048 SHROOM4Q9ULL8 1493 aa24.82■■□□□ 1.56
ALK-201ENST00000389048 TTBK1Q5TCY1 1321 aaPredicted RBP24.68■■□□□ 1.54
ALK-201ENST00000389048 ERICH6Q7L0X2 663 aa24.37■■□□□ 1.49
ALK-201ENST00000389048 FAM9AQ8IZU1 332 aaPredicted RBP24.26■■□□□ 1.47
ALK-201ENST00000389048 APLP2Q06481 763 aa24.25■■□□□ 1.47
ALK-201ENST00000389048 PCGF6Q9BYE7 350 aa24.15■■□□□ 1.46
ALK-201ENST00000389048 RANGAP1P46060 587 aaPredicted RBP24.14■■□□□ 1.45
ALK-201ENST00000389048 YTHDC1Q96MU7 727 aaKnown RBP23.9■■□□□ 1.42
ALK-201ENST00000389048 MYT1Q01538 1121 aa23.82■■□□□ 1.4
ALK-201ENST00000389048 CENPBP07199 599 aaPredicted RBP23.8■■□□□ 1.4
ALK-201ENST00000389048 CCER1Q8TC90 406 aaPredicted RBP23.79■■□□□ 1.4
ALK-201ENST00000389048 ATP1B4Q9UN42 357 aaPredicted RBP23.78■■□□□ 1.4
ALK-201ENST00000389048 NEFLP07196 543 aa23.46■■□□□ 1.35
ALK-201ENST00000389048 PPARGC1BQ86YN6 1023 aaKnown RBP23.46■■□□□ 1.35
ALK-201ENST00000389048 ZEB1P37275 1124 aaPredicted RBP23.24■■□□□ 1.31
ALK-201ENST00000389048 CNGB1Q14028 1251 aaPredicted RBP23.22■■□□□ 1.31
ALK-201ENST00000389048 UBTFP17480 764 aaKnown RBP23.18■■□□□ 1.3
ALK-201ENST00000389048 TRIM41Q8WV44 630 aa23.18■■□□□ 1.3
ALK-201ENST00000389048 POLR3GLQ9BT43 218 aa23.16■■□□□ 1.3
ALK-201ENST00000389048 NISCHQ9Y2I1 1504 aa23.15■■□□□ 1.3
ALK-201ENST00000389048 DAXXQ9UER7 740 aaPredicted RBP23.07■■□□□ 1.28
ALK-201ENST00000389048 ITGAEP38570 1179 aa22.95■■□□□ 1.27
ALK-201ENST00000389048 CHIC1Q5VXU3 224 aa22.89■■□□□ 1.25
ALK-201ENST00000389048 MYT1LQ9UL68 1186 aa22.84■■□□□ 1.25
ALK-201ENST00000389048 SLC4A1APQ9BWU0 796 aaKnown RBP22.69■■□□□ 1.22
ALK-201ENST00000389048 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.64■■□□□ 1.22
ALK-201ENST00000389048 HNRNPUL2Q1KMD3 747 aaKnown RBP22.64■■□□□ 1.22
ALK-201ENST00000389048 HRCP23327 699 aa22.63■■□□□ 1.21
ALK-201ENST00000389048 ZNF316A6NFI3 1004 aaPredicted RBP22.57■■□□□ 1.2
ALK-201ENST00000389048 CLSPNQ9HAW4 1339 aa22.54■■□□□ 1.2
ALK-201ENST00000389048 TRIM26Q12899 539 aaPredicted RBP22.52■■□□□ 1.2
ALK-201ENST00000389048 RTL5Q5HYW3 569 aaPredicted RBP22.49■■□□□ 1.19
ALK-201ENST00000389048 BCANQ96GW7 911 aa22.47■■□□□ 1.19
ALK-201ENST00000389048 LOC105371045A0A1W2PR82 267 aa22.42■■□□□ 1.18
ALK-201ENST00000389048 BCL11AQ9H165 835 aa22.38■■□□□ 1.17
ALK-201ENST00000389048 DIEXFQ68CQ4 756 aaKnown RBP22.2■■□□□ 1.14
ALK-201ENST00000389048 NEUROD1Q13562 356 aa22.11■■□□□ 1.13
ALK-201ENST00000389048 SLC24A1O60721 1099 aa22.05■■□□□ 1.12
ALK-201ENST00000389048 GTF3C3Q9Y5Q9 886 aa22.05■■□□□ 1.12
ALK-201ENST00000389048 FAM50AQ14320 339 aaKnown RBP22.04■■□□□ 1.12
ALK-201ENST00000389048 ZNF326Q5BKZ1 582 aaKnown RBP22■■□□□ 1.11
ALK-201ENST00000389048 TRIM52Q96A61 297 aa21.99■■□□□ 1.11
ALK-201ENST00000389048 CDK11AQ9UQ88 783 aaPredicted RBP21.87■■□□□ 1.09
ALK-201ENST00000389048 NPM2Q86SE8 214 aaKnown RBP21.85■■□□□ 1.09
ALK-201ENST00000389048 ZBTB47Q9UFB7 747 aaPredicted RBP21.84■■□□□ 1.09
ALK-201ENST00000389048 EIF5BO60841 1220 aaKnown RBP21.83■■□□□ 1.09
ALK-201ENST00000389048 CANXP27824 592 aaKnown RBP21.81■■□□□ 1.08
ALK-201ENST00000389048 ANP32CO43423 234 aa21.72■■□□□ 1.07
ALK-201ENST00000389048 ARID3CA6NKF2 412 aa21.58■■□□□ 1.05
ALK-201ENST00000389048 ARXQ96QS3 562 aa21.58■■□□□ 1.04
ALK-201ENST00000389048 ANP32AP39687 249 aaKnown RBP21.54■■□□□ 1.04
ALK-201ENST00000389048 NBR1Q14596 966 aa21.44■■□□□ 1.02
ALK-201ENST00000389048 FBLN2P98095 1184 aa21.42■■□□□ 1.02
ALK-201ENST00000389048 SALL2Q9Y467 1007 aaPredicted RBP21.41■■□□□ 1.02
ALK-201ENST00000389048 PLPPR3Q6T4P5 718 aa21.4■■□□□ 1.02
ALK-201ENST00000389048 FKBP8Q14318 412 aa21.4■■□□□ 1.02
ALK-201ENST00000389048 HSP90AA1P07900 732 aaKnown RBP21.38■■□□□ 1.01
ALK-201ENST00000389048 P3H3Q8IVL6 736 aa21.36■■□□□ 1.01
ALK-201ENST00000389048 ACIN1Q9UKV3 1341 aaKnown RBP21.36■■□□□ 1.01
ALK-201ENST00000389048 NEFMP07197 916 aa21.36■■□□□ 1.01
ALK-201ENST00000389048 ANP32BQ92688 251 aaKnown RBP21.31■■□□□ 1
ALK-201ENST00000389048 ZNF777Q9ULD5 760 aaPredicted RBP21.26■□□□□ 0.99
ALK-201ENST00000389048 FAM9BQ8IZU0 186 aa21.23■□□□□ 0.99
ALK-201ENST00000389048 PABPN1Q86U42 306 aaKnown RBP eCLIP21.2■□□□□ 0.98
ALK-201ENST00000389048 GLIPR1L2Q4G1C9 344 aa21.18■□□□□ 0.98
ALK-201ENST00000389048 IRX6P78412 446 aaPredicted RBP21.16■□□□□ 0.98
ALK-201ENST00000389048 HNRNPUQ00839 825 aaKnown RBP eCLIP21.14■□□□□ 0.98
ALK-201ENST00000389048 CHGAP10645 457 aaKnown RBP21.14■□□□□ 0.97
ALK-201ENST00000389048 SENP3Q9H4L4 574 aaPredicted RBP21.11■□□□□ 0.97
ALK-201ENST00000389048 UPF2Q9HAU5 1272 aaKnown RBP21.07■□□□□ 0.96
ALK-201ENST00000389048 PLEKHG5O94827 1062 aa21.06■□□□□ 0.96
ALK-201ENST00000389048 DDX10Q13206 875 aaKnown RBP21.05■□□□□ 0.96
ALK-201ENST00000389048 SENP3-EIF4A1A0A087X0R7 540 aa21.03■□□□□ 0.96
ALK-201ENST00000389048 TPRNQ4KMQ1 711 aa21.01■□□□□ 0.95
ALK-201ENST00000389048 CCDC136Q96JN2 1154 aa20.97■□□□□ 0.95
ALK-201ENST00000389048 A0A0G2JS52 829 aa20.97■□□□□ 0.95
ALK-201ENST00000389048 STAG3Q9UJ98 1225 aa20.96■□□□□ 0.95
ALK-201ENST00000389048 SCAF1Q9H7N4 1312 aaKnown RBP20.95■□□□□ 0.95
ALK-201ENST00000389048 HIRIP3Q9BW71 556 aaPredicted RBP20.93■□□□□ 0.94
ALK-201ENST00000389048 ZBTB7CA1YPR0 619 aa20.89■□□□□ 0.93
ALK-201ENST00000389048 TULP1O00294 542 aaPredicted RBP20.87■□□□□ 0.93
ALK-201ENST00000389048 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.86■□□□□ 0.93
ALK-201ENST00000389048 ESF1Q9H501 851 aaKnown RBP20.84■□□□□ 0.93
ALK-201ENST00000389048 TONSLQ96HA7 1378 aa20.83■□□□□ 0.93
ALK-201ENST00000389048 CHIC2Q9UKJ5 165 aa20.82■□□□□ 0.92
ALK-201ENST00000389048 TMC1Q8TDI8 760 aa20.82■□□□□ 0.92
ALK-201ENST00000389048 KDM2AQ9Y2K7 1162 aa20.82■□□□□ 0.92
ALK-201ENST00000389048 RTN4Q9NQC3 1192 aaKnown RBP20.81■□□□□ 0.92
ALK-201ENST00000389048 CDK11BP21127 795 aaKnown RBP20.78■□□□□ 0.92
ALK-201ENST00000389048 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.78■□□□□ 0.92
ALK-201ENST00000389048 TAOK2Q9UL54 1235 aa20.77■□□□□ 0.92
ALK-201ENST00000389048 WDR43Q15061 677 aaKnown RBP eCLIP20.77■□□□□ 0.92
ALK-201ENST00000389048 NCLP19338 710 aaKnown RBP20.76■□□□□ 0.91
ALK-201ENST00000389048 MRS2Q9HD23 443 aa20.72■□□□□ 0.91
ALK-201ENST00000389048 TRIM44Q96DX7 344 aaPredicted RBP20.68■□□□□ 0.9
ALK-201ENST00000389048 MIER1Q8N108 512 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms