RNA–Protein interactions for RNA: ENST00000407218.5

MECP2-203, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-203ENST00000407218 NISCHQ9Y2I1 1504 aa39.86■■■■□ 3.97
MECP2-203ENST00000407218 CCDC180Q9P1Z9 1646 aa35.65■■■■□ 3.3
MECP2-203ENST00000407218 ABCC9O60706 1549 aa35.16■■■■□ 3.22
MECP2-203ENST00000407218 RB1CC1Q8TDY2 1594 aa33.74■■■□□ 2.99
MECP2-203ENST00000407218 NACADO15069 1562 aa33.62■■■□□ 2.97
MECP2-203ENST00000407218 DCAF8L2P0C7V8 631 aa33.46■■■□□ 2.95
MECP2-203ENST00000407218 MYO15BQ96JP2 1530 aa33.36■■■□□ 2.93
MECP2-203ENST00000407218 ZCCHC6Q5VYS8 1495 aaKnown RBP33.25■■■□□ 2.91
MECP2-203ENST00000407218 DCAF1Q9Y4B6 1507 aa33.02■■■□□ 2.88
MECP2-203ENST00000407218 UNC13AQ9UPW8 1703 aa32.85■■■□□ 2.85
MECP2-203ENST00000407218 PABPN1Q86U42 306 aaKnown RBP eCLIP32.72■■■□□ 2.83
MECP2-203ENST00000407218 BICRAQ9NZM4 1560 aa32.68■■■□□ 2.82
MECP2-203ENST00000407218 DNAJC5BQ9UF47 199 aa32.6■■■□□ 2.81
MECP2-203ENST00000407218 SHROOM4Q9ULL8 1493 aa32.48■■■□□ 2.79
MECP2-203ENST00000407218 SCRIBQ14160 1630 aa32.38■■■□□ 2.77
MECP2-203ENST00000407218 EIF4G1Q04637 1599 aaKnown RBP31.87■■■□□ 2.69
MECP2-203ENST00000407218 CC2D2AQ9P2K1 1620 aa31.82■■■□□ 2.68
MECP2-203ENST00000407218 CECR2Q9BXF3 1484 aa31.69■■■□□ 2.66
MECP2-203ENST00000407218 NCAPD3P42695 1498 aa31.01■■■□□ 2.56
MECP2-203ENST00000407218 SMARCA4P51532 1647 aa30.98■■■□□ 2.55
MECP2-203ENST00000407218 ATAD2BQ9ULI0 1458 aa30.93■■■□□ 2.54
MECP2-203ENST00000407218 BAZ1AQ9NRL2 1556 aaPredicted RBP30.92■■■□□ 2.54
MECP2-203ENST00000407218 SMARCA2P51531 1590 aa30.92■■■□□ 2.54
MECP2-203ENST00000407218 HMGXB3Q12766 1538 aa30.84■■■□□ 2.53
MECP2-203ENST00000407218 MROH2BQ7Z745 1585 aa30.79■■■□□ 2.52
MECP2-203ENST00000407218 PEG3Q9GZU2 1588 aa30.76■■■□□ 2.52
MECP2-203ENST00000407218 BAZ1BQ9UIG0 1483 aaKnown RBP30.64■■■□□ 2.5
MECP2-203ENST00000407218 RSF1Q96T23 1441 aaPredicted RBP30.51■■■□□ 2.47
MECP2-203ENST00000407218 WIZO95785 1651 aa30.48■■■□□ 2.47
MECP2-203ENST00000407218 ERCC6Q03468 1493 aa30.38■■■□□ 2.45
MECP2-203ENST00000407218 CUX2O14529 1486 aa30.3■■■□□ 2.44
MECP2-203ENST00000407218 NESP48681 1621 aa30.28■■■□□ 2.44
MECP2-203ENST00000407218 LAMC3Q9Y6N6 1575 aa30.27■■■□□ 2.44
MECP2-203ENST00000407218 TOP2AP11388 1531 aaKnown RBP30.12■■■□□ 2.41
MECP2-203ENST00000407218 SUPT5HO00267 1087 aaKnown RBP30.12■■■□□ 2.41
MECP2-203ENST00000407218 PDS5BQ9NTI5 1447 aa30.07■■■□□ 2.4
MECP2-203ENST00000407218 CADPSQ9ULU8 1353 aa30.05■■■□□ 2.4
MECP2-203ENST00000407218 THOC2Q8NI27 1593 aaKnown RBP29.99■■■□□ 2.39
MECP2-203ENST00000407218 KIF21AQ7Z4S6 1674 aa29.92■■■□□ 2.38
MECP2-203ENST00000407218 CCDC88BA6NC98 1476 aa29.8■■■□□ 2.36
MECP2-203ENST00000407218 CFTRP13569 1480 aa29.8■■■□□ 2.36
MECP2-203ENST00000407218 DNAJC5Q9H3Z4 198 aa29.79■■■□□ 2.36
MECP2-203ENST00000407218 MRC2Q9UBG0 1479 aa29.77■■■□□ 2.36
MECP2-203ENST00000407218 CEP164Q9UPV0 1460 aa29.72■■■□□ 2.35
MECP2-203ENST00000407218 FANCD2Q9BXW9 1451 aa29.7■■■□□ 2.35
MECP2-203ENST00000407218 WDR62O43379 1518 aa29.7■■■□□ 2.34
MECP2-203ENST00000407218 PRDM2Q13029 1718 aa29.52■■■□□ 2.32
MECP2-203ENST00000407218 URB2Q14146 1524 aaKnown RBP29.41■■■□□ 2.3
MECP2-203ENST00000407218 ABCC8Q09428 1581 aa29.22■■■□□ 2.27
MECP2-203ENST00000407218 TOPBP1Q92547 1522 aa29.18■■■□□ 2.26
MECP2-203ENST00000407218 IFT140Q96RY7 1462 aa29.13■■■□□ 2.25
MECP2-203ENST00000407218 DNMBPQ6XZF7 1577 aa29.13■■■□□ 2.25
MECP2-203ENST00000407218 ZNF608Q9ULD9 1512 aaPredicted RBP28.95■■■□□ 2.23
MECP2-203ENST00000407218 TARBP1Q13395 1621 aaKnown RBP28.9■■■□□ 2.22
MECP2-203ENST00000407218 POLA1P09884 1462 aaPredicted RBP28.9■■■□□ 2.22
MECP2-203ENST00000407218 OSCARQ8IYS5 282 aa28.87■■■□□ 2.21
MECP2-203ENST00000407218 CUX1P39880 1505 aa28.87■■■□□ 2.21
MECP2-203ENST00000407218 EIF4G3O43432 1585 aaKnown RBP28.87■■■□□ 2.21
MECP2-203ENST00000407218 WRNQ14191 1432 aaPredicted RBP eCLIP28.77■■■□□ 2.2
MECP2-203ENST00000407218 SOGA1O94964 1423 aa28.76■■■□□ 2.19
MECP2-203ENST00000407218 WDR97A6NE52 1622 aa28.76■■■□□ 2.19
MECP2-203ENST00000407218 FGD5Q6ZNL6 1462 aa28.75■■■□□ 2.19
MECP2-203ENST00000407218 AQRO60306 1485 aaKnown RBP eCLIP28.72■■■□□ 2.19
MECP2-203ENST00000407218 RAD54L2Q9Y4B4 1467 aa28.71■■■□□ 2.19
MECP2-203ENST00000407218 SYNJ1O43426 1573 aa28.7■■■□□ 2.18
MECP2-203ENST00000407218 TOP2BQ02880 1626 aa28.63■■■□□ 2.17
MECP2-203ENST00000407218 BIVM-ERCC5R4GMW8 1640 aa28.61■■■□□ 2.17
MECP2-203ENST00000407218 TDRD9Q8NDG6 1382 aaKnown RBP28.61■■■□□ 2.17
MECP2-203ENST00000407218 CHD1O14646 1710 aa28.53■■■□□ 2.16
MECP2-203ENST00000407218 GRIN2BQ13224 1484 aa28.52■■■□□ 2.16
MECP2-203ENST00000407218 MAGI1Q96QZ7 1491 aaPredicted RBP28.51■■■□□ 2.15
MECP2-203ENST00000407218 ABCA10Q8WWZ4 1543 aa28.5■■■□□ 2.15
MECP2-203ENST00000407218 TRIM41Q8WV44 630 aa28.5■■■□□ 2.15
MECP2-203ENST00000407218 SNAPC4Q5SXM2 1469 aa28.49■■■□□ 2.15
MECP2-203ENST00000407218 RIMBP3CA6NJZ7 1639 aa28.45■■■□□ 2.14
MECP2-203ENST00000407218 RIMBP3BA6NNM3 1639 aa28.45■■■□□ 2.14
MECP2-203ENST00000407218 RIMBP3Q9UFD9 1639 aa28.45■■■□□ 2.14
MECP2-203ENST00000407218 ARHGEF11O15085 1522 aa28.43■■■□□ 2.14
MECP2-203ENST00000407218 GAPVD1Q14C86 1478 aa28.43■■■□□ 2.14
MECP2-203ENST00000407218 FBLN2P98095 1184 aa28.42■■■□□ 2.14
MECP2-203ENST00000407218 ABCA5Q8WWZ7 1642 aa28.41■■■□□ 2.14
MECP2-203ENST00000407218 SYNJ2O15056 1496 aa28.39■■■□□ 2.13
MECP2-203ENST00000407218 PBRM1Q86U86 1689 aa28.37■■■□□ 2.13
MECP2-203ENST00000407218 CHMP7Q8WUX9 453 aaPredicted RBP28.33■■■□□ 2.13
MECP2-203ENST00000407218 CLASP1Q7Z460 1538 aa28.3■■■□□ 2.12
MECP2-203ENST00000407218 ERICH3Q5RHP9 1530 aa28.17■■■□□ 2.1
MECP2-203ENST00000407218 ADAMTS12P58397 1594 aa28.16■■■□□ 2.1
MECP2-203ENST00000407218 ARAP1Q96P48 1450 aa28.16■■■□□ 2.1
MECP2-203ENST00000407218 CHIC1Q5VXU3 224 aa28.15■■■□□ 2.1
MECP2-203ENST00000407218 KIF27Q86VH2 1401 aa28.14■■■□□ 2.1
MECP2-203ENST00000407218 GRIN2AQ12879 1464 aa28.14■■■□□ 2.09
MECP2-203ENST00000407218 FHAD1B1AJZ9 1412 aa28.11■■■□□ 2.09
MECP2-203ENST00000407218 CYB5RLQ6IPT4 315 aa28.11■■■□□ 2.09
MECP2-203ENST00000407218 NUP160Q12769 1436 aa28.05■■■□□ 2.08
MECP2-203ENST00000407218 RUSC2Q8N2Y8 1516 aa28.04■■■□□ 2.08
MECP2-203ENST00000407218 IGF1RP08069 1367 aa27.99■■■□□ 2.07
MECP2-203ENST00000407218 CEP170Q5SW79 1584 aa27.98■■■□□ 2.07
MECP2-203ENST00000407218 FAM9AQ8IZU1 332 aaPredicted RBP27.89■■■□□ 2.06
MECP2-203ENST00000407218 SHROOM2Q13796 1616 aa27.89■■■□□ 2.05
MECP2-203ENST00000407218 CARMIL1Q5VZK9 1371 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms