RNA–Protein interactions for RNA: ENST00000580816.1

U1.21-201, humanhuman

BASIC

Gene U1, Length 167 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.21-201ENST00000580816 NISCHQ9Y2I1 1504 aa39.89■■■■□ 3.98
U1.21-201ENST00000580816 CCDC180Q9P1Z9 1646 aa35.32■■■■□ 3.24
U1.21-201ENST00000580816 ABCC9O60706 1549 aa34.02■■■■□ 3.04
U1.21-201ENST00000580816 ZCCHC6Q5VYS8 1495 aaKnown RBP33.36■■■□□ 2.93
U1.21-201ENST00000580816 NACADO15069 1562 aa33.05■■■□□ 2.88
U1.21-201ENST00000580816 DCAF1Q9Y4B6 1507 aa33.05■■■□□ 2.88
U1.21-201ENST00000580816 DCAF8L2P0C7V8 631 aa33.02■■■□□ 2.88
U1.21-201ENST00000580816 MYO15BQ96JP2 1530 aa33.01■■■□□ 2.87
U1.21-201ENST00000580816 RB1CC1Q8TDY2 1594 aa32.97■■■□□ 2.87
U1.21-201ENST00000580816 UNC13AQ9UPW8 1703 aa32.28■■■□□ 2.76
U1.21-201ENST00000580816 SCRIBQ14160 1630 aa32.22■■■□□ 2.75
U1.21-201ENST00000580816 BICRAQ9NZM4 1560 aa31.97■■■□□ 2.71
U1.21-201ENST00000580816 PABPN1Q86U42 306 aaKnown RBP eCLIP31.81■■■□□ 2.68
U1.21-201ENST00000580816 SHROOM4Q9ULL8 1493 aa31.75■■■□□ 2.67
U1.21-201ENST00000580816 EIF4G1Q04637 1599 aaKnown RBP31.08■■■□□ 2.57
U1.21-201ENST00000580816 CECR2Q9BXF3 1484 aa31.01■■■□□ 2.55
U1.21-201ENST00000580816 BAZ1AQ9NRL2 1556 aaPredicted RBP30.9■■■□□ 2.54
U1.21-201ENST00000580816 SMARCA4P51532 1647 aa30.88■■■□□ 2.53
U1.21-201ENST00000580816 CC2D2AQ9P2K1 1620 aa30.83■■■□□ 2.53
U1.21-201ENST00000580816 MROH2BQ7Z745 1585 aa30.75■■■□□ 2.51
U1.21-201ENST00000580816 DNAJC5BQ9UF47 199 aa30.73■■■□□ 2.51
U1.21-201ENST00000580816 PEG3Q9GZU2 1588 aa30.58■■■□□ 2.49
U1.21-201ENST00000580816 SMARCA2P51531 1590 aa30.57■■■□□ 2.48
U1.21-201ENST00000580816 ATAD2BQ9ULI0 1458 aa30.56■■■□□ 2.48
U1.21-201ENST00000580816 RSF1Q96T23 1441 aaPredicted RBP30.56■■■□□ 2.48
U1.21-201ENST00000580816 WIZO95785 1651 aa30.46■■■□□ 2.47
U1.21-201ENST00000580816 NCAPD3P42695 1498 aa30.46■■■□□ 2.47
U1.21-201ENST00000580816 HMGXB3Q12766 1538 aa30.4■■■□□ 2.46
U1.21-201ENST00000580816 BAZ1BQ9UIG0 1483 aaKnown RBP30.34■■■□□ 2.45
U1.21-201ENST00000580816 TOP2AP11388 1531 aaKnown RBP30.18■■■□□ 2.42
U1.21-201ENST00000580816 SUPT5HO00267 1087 aaKnown RBP30.08■■■□□ 2.41
U1.21-201ENST00000580816 CCDC88BA6NC98 1476 aa29.78■■■□□ 2.36
U1.21-201ENST00000580816 LAMC3Q9Y6N6 1575 aa29.61■■■□□ 2.33
U1.21-201ENST00000580816 NESP48681 1621 aa29.59■■■□□ 2.33
U1.21-201ENST00000580816 CADPSQ9ULU8 1353 aa29.58■■■□□ 2.33
U1.21-201ENST00000580816 CFTRP13569 1480 aa29.54■■■□□ 2.32
U1.21-201ENST00000580816 PRDM2Q13029 1718 aa29.44■■■□□ 2.3
U1.21-201ENST00000580816 PDS5BQ9NTI5 1447 aa29.36■■■□□ 2.29
U1.21-201ENST00000580816 KIF21AQ7Z4S6 1674 aa29.31■■■□□ 2.28
U1.21-201ENST00000580816 ERCC6Q03468 1493 aa29.29■■■□□ 2.28
U1.21-201ENST00000580816 FANCD2Q9BXW9 1451 aa29.27■■■□□ 2.28
U1.21-201ENST00000580816 CEP164Q9UPV0 1460 aa29.2■■■□□ 2.26
U1.21-201ENST00000580816 THOC2Q8NI27 1593 aaKnown RBP29.09■■■□□ 2.25
U1.21-201ENST00000580816 MRC2Q9UBG0 1479 aa29.05■■■□□ 2.24
U1.21-201ENST00000580816 WDR62O43379 1518 aa28.96■■■□□ 2.23
U1.21-201ENST00000580816 URB2Q14146 1524 aaKnown RBP28.95■■■□□ 2.23
U1.21-201ENST00000580816 DNMBPQ6XZF7 1577 aa28.89■■■□□ 2.22
U1.21-201ENST00000580816 ABCC8Q09428 1581 aa28.88■■■□□ 2.21
U1.21-201ENST00000580816 TOPBP1Q92547 1522 aa28.86■■■□□ 2.21
U1.21-201ENST00000580816 CUX1P39880 1505 aa28.83■■■□□ 2.21
U1.21-201ENST00000580816 CUX2O14529 1486 aa28.82■■■□□ 2.2
U1.21-201ENST00000580816 WRNQ14191 1432 aaPredicted RBP eCLIP28.8■■■□□ 2.2
U1.21-201ENST00000580816 BIVM-ERCC5R4GMW8 1640 aa28.74■■■□□ 2.19
U1.21-201ENST00000580816 SYNJ1O43426 1573 aa28.74■■■□□ 2.19
U1.21-201ENST00000580816 TOP2BQ02880 1626 aa28.72■■■□□ 2.19
U1.21-201ENST00000580816 POLA1P09884 1462 aaPredicted RBP28.66■■■□□ 2.18
U1.21-201ENST00000580816 FGD5Q6ZNL6 1462 aa28.66■■■□□ 2.18
U1.21-201ENST00000580816 IFT140Q96RY7 1462 aa28.55■■■□□ 2.16
U1.21-201ENST00000580816 TARBP1Q13395 1621 aaKnown RBP28.54■■■□□ 2.16
U1.21-201ENST00000580816 RAD54L2Q9Y4B4 1467 aa28.5■■■□□ 2.15
U1.21-201ENST00000580816 SOGA1O94964 1423 aa28.5■■■□□ 2.15
U1.21-201ENST00000580816 WDR97A6NE52 1622 aa28.46■■■□□ 2.15
U1.21-201ENST00000580816 ABCA10Q8WWZ4 1543 aa28.39■■■□□ 2.14
U1.21-201ENST00000580816 TRIM41Q8WV44 630 aa28.39■■■□□ 2.14
U1.21-201ENST00000580816 ZNF608Q9ULD9 1512 aaPredicted RBP28.38■■■□□ 2.13
U1.21-201ENST00000580816 CHIC1Q5VXU3 224 aa28.37■■■□□ 2.13
U1.21-201ENST00000580816 EIF4G3O43432 1585 aaKnown RBP28.34■■■□□ 2.13
U1.21-201ENST00000580816 ABCA5Q8WWZ7 1642 aa28.29■■■□□ 2.12
U1.21-201ENST00000580816 TDRD9Q8NDG6 1382 aaKnown RBP28.27■■■□□ 2.12
U1.21-201ENST00000580816 AQRO60306 1485 aaKnown RBP eCLIP28.26■■■□□ 2.11
U1.21-201ENST00000580816 GAPVD1Q14C86 1478 aa28.21■■■□□ 2.11
U1.21-201ENST00000580816 PBRM1Q86U86 1689 aa28.19■■■□□ 2.1
U1.21-201ENST00000580816 KIF27Q86VH2 1401 aa28.16■■■□□ 2.1
U1.21-201ENST00000580816 GRIN2BQ13224 1484 aa28.14■■■□□ 2.09
U1.21-201ENST00000580816 ERICH3Q5RHP9 1530 aa28.08■■■□□ 2.08
U1.21-201ENST00000580816 RUSC2Q8N2Y8 1516 aa28.04■■■□□ 2.08
U1.21-201ENST00000580816 SNAPC4Q5SXM2 1469 aa28.04■■■□□ 2.08
U1.21-201ENST00000580816 MAGI1Q96QZ7 1491 aaPredicted RBP28.03■■■□□ 2.08
U1.21-201ENST00000580816 ADAMTS12P58397 1594 aa27.98■■■□□ 2.07
U1.21-201ENST00000580816 IGF1RP08069 1367 aa27.96■■■□□ 2.07
U1.21-201ENST00000580816 EEA1Q15075 1411 aa27.95■■■□□ 2.07
U1.21-201ENST00000580816 CUL7Q14999 1698 aa27.94■■■□□ 2.06
U1.21-201ENST00000580816 SYNJ2O15056 1496 aa27.9■■■□□ 2.06
U1.21-201ENST00000580816 CHD1O14646 1710 aa27.9■■■□□ 2.06
U1.21-201ENST00000580816 FHAD1B1AJZ9 1412 aa27.89■■■□□ 2.06
U1.21-201ENST00000580816 CARMIL1Q5VZK9 1371 aa27.81■■■□□ 2.04
U1.21-201ENST00000580816 GRIN2AQ12879 1464 aa27.8■■■□□ 2.04
U1.21-201ENST00000580816 CHMP7Q8WUX9 453 aaPredicted RBP27.79■■■□□ 2.04
U1.21-201ENST00000580816 FBLN2P98095 1184 aa27.78■■■□□ 2.04
U1.21-201ENST00000580816 FAM9AQ8IZU1 332 aaPredicted RBP27.78■■■□□ 2.04
U1.21-201ENST00000580816 CSRNP3Q8WYN3 585 aa27.78■■■□□ 2.04
U1.21-201ENST00000580816 PRXQ9BXM0 1461 aa27.75■■■□□ 2.03
U1.21-201ENST00000580816 RAPGEF2Q9Y4G8 1499 aa27.72■■■□□ 2.03
U1.21-201ENST00000580816 KIF21BO75037 1637 aa27.67■■■□□ 2.02
U1.21-201ENST00000580816 NUP160Q12769 1436 aa27.65■■■□□ 2.02
U1.21-201ENST00000580816 CEP170Q5SW79 1584 aa27.65■■■□□ 2.02
U1.21-201ENST00000580816 OSCARQ8IYS5 282 aa27.64■■■□□ 2.02
U1.21-201ENST00000580816 CLASP1Q7Z460 1538 aa27.58■■■□□ 2.01
U1.21-201ENST00000580816 CTTNBP2Q8WZ74 1663 aa27.51■■□□□ 1.99
U1.21-201ENST00000580816 GOLGA3Q08378 1498 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms