RNA–Protein interactions for RNA: ENST00000639689.1

GCSH-209, Transcript of glycine cleavage system protein H, humanhuman

TSL 5 BASIC

Gene GCSH, Length 2,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSH-209ENST00000639689 NISCHQ9Y2I1 1504 aa38.65■■■■□ 3.78
GCSH-209ENST00000639689 CCDC180Q9P1Z9 1646 aa33.46■■■□□ 2.95
GCSH-209ENST00000639689 ZCCHC6Q5VYS8 1495 aaKnown RBP32.58■■■□□ 2.81
GCSH-209ENST00000639689 DCAF1Q9Y4B6 1507 aa31.95■■■□□ 2.71
GCSH-209ENST00000639689 SHROOM4Q9ULL8 1493 aa31.85■■■□□ 2.69
GCSH-209ENST00000639689 DCAF8L2P0C7V8 631 aa31.67■■■□□ 2.66
GCSH-209ENST00000639689 MYO15BQ96JP2 1530 aa31.38■■■□□ 2.61
GCSH-209ENST00000639689 ABCC9O60706 1549 aa31.21■■■□□ 2.59
GCSH-209ENST00000639689 NACADO15069 1562 aa31.02■■■□□ 2.56
GCSH-209ENST00000639689 SUPT5HO00267 1087 aaKnown RBP30.86■■■□□ 2.53
GCSH-209ENST00000639689 SCRIBQ14160 1630 aa30.86■■■□□ 2.53
GCSH-209ENST00000639689 RB1CC1Q8TDY2 1594 aa30.63■■■□□ 2.49
GCSH-209ENST00000639689 RSF1Q96T23 1441 aaPredicted RBP30.19■■■□□ 2.42
GCSH-209ENST00000639689 UNC13AQ9UPW8 1703 aa30.18■■■□□ 2.42
GCSH-209ENST00000639689 CECR2Q9BXF3 1484 aa30.04■■■□□ 2.4
GCSH-209ENST00000639689 MROH2BQ7Z745 1585 aa29.91■■■□□ 2.38
GCSH-209ENST00000639689 CHIC1Q5VXU3 224 aa29.85■■■□□ 2.37
GCSH-209ENST00000639689 BICRAQ9NZM4 1560 aa29.82■■■□□ 2.36
GCSH-209ENST00000639689 BAZ1AQ9NRL2 1556 aaPredicted RBP29.77■■■□□ 2.36
GCSH-209ENST00000639689 WIZO95785 1651 aa29.71■■■□□ 2.35
GCSH-209ENST00000639689 SMARCA4P51532 1647 aa29.62■■■□□ 2.33
GCSH-209ENST00000639689 PABPN1Q86U42 306 aaKnown RBP eCLIP29.52■■■□□ 2.32
GCSH-209ENST00000639689 TOP2AP11388 1531 aaKnown RBP29.36■■■□□ 2.29
GCSH-209ENST00000639689 PEG3Q9GZU2 1588 aa29.25■■■□□ 2.27
GCSH-209ENST00000639689 EIF4G1Q04637 1599 aaKnown RBP29.16■■■□□ 2.26
GCSH-209ENST00000639689 SMARCA2P51531 1590 aa29.14■■■□□ 2.26
GCSH-209ENST00000639689 CCDC88BA6NC98 1476 aa29.09■■■□□ 2.25
GCSH-209ENST00000639689 ATAD2BQ9ULI0 1458 aa29■■■□□ 2.23
GCSH-209ENST00000639689 TRIM41Q8WV44 630 aa28.95■■■□□ 2.23
GCSH-209ENST00000639689 BAZ1BQ9UIG0 1483 aaKnown RBP28.82■■■□□ 2.2
GCSH-209ENST00000639689 LOC105371045A0A1W2PR82 267 aa28.74■■■□□ 2.19
GCSH-209ENST00000639689 ABCC8Q09428 1581 aa28.66■■■□□ 2.18
GCSH-209ENST00000639689 HMGXB3Q12766 1538 aa28.66■■■□□ 2.18
GCSH-209ENST00000639689 NCAPD3P42695 1498 aa28.66■■■□□ 2.18
GCSH-209ENST00000639689 FAM9AQ8IZU1 332 aaPredicted RBP28.47■■■□□ 2.15
GCSH-209ENST00000639689 WRNQ14191 1432 aaPredicted RBP eCLIP28.35■■■□□ 2.13
GCSH-209ENST00000639689 SYNJ1O43426 1573 aa28.29■■■□□ 2.12
GCSH-209ENST00000639689 CC2D2AQ9P2K1 1620 aa28.27■■■□□ 2.12
GCSH-209ENST00000639689 SOGA1O94964 1423 aa28.21■■■□□ 2.11
GCSH-209ENST00000639689 EEA1Q15075 1411 aa28.17■■■□□ 2.1
GCSH-209ENST00000639689 CFTRP13569 1480 aa28.16■■■□□ 2.1
GCSH-209ENST00000639689 RUSC2Q8N2Y8 1516 aa28.11■■■□□ 2.09
GCSH-209ENST00000639689 TOP2BQ02880 1626 aa28.11■■■□□ 2.09
GCSH-209ENST00000639689 PRDM2Q13029 1718 aa28.09■■■□□ 2.09
GCSH-209ENST00000639689 BIVM-ERCC5R4GMW8 1640 aa28.08■■■□□ 2.09
GCSH-209ENST00000639689 EHMT2Q96KQ7 1210 aa28.04■■■□□ 2.08
GCSH-209ENST00000639689 CSRNP3Q8WYN3 585 aa27.99■■■□□ 2.07
GCSH-209ENST00000639689 CADPSQ9ULU8 1353 aa27.94■■■□□ 2.06
GCSH-209ENST00000639689 CUX1P39880 1505 aa27.93■■■□□ 2.06
GCSH-209ENST00000639689 PCGF6Q9BYE7 350 aa27.89■■■□□ 2.05
GCSH-209ENST00000639689 TNIKQ9UKE5 1360 aa27.85■■■□□ 2.05
GCSH-209ENST00000639689 KIF21BO75037 1637 aa27.85■■■□□ 2.05
GCSH-209ENST00000639689 GOLGA3Q08378 1498 aa27.82■■■□□ 2.04
GCSH-209ENST00000639689 CEP164Q9UPV0 1460 aa27.78■■■□□ 2.04
GCSH-209ENST00000639689 TRIM26Q12899 539 aaPredicted RBP27.75■■■□□ 2.03
GCSH-209ENST00000639689 CEP162Q5TB80 1403 aa27.74■■■□□ 2.03
GCSH-209ENST00000639689 FANCD2Q9BXW9 1451 aa27.64■■■□□ 2.01
GCSH-209ENST00000639689 UBTFP17480 764 aaKnown RBP27.63■■■□□ 2.01
GCSH-209ENST00000639689 RAPGEF2Q9Y4G8 1499 aa27.61■■■□□ 2.01
GCSH-209ENST00000639689 NESP48681 1621 aa27.6■■■□□ 2.01
GCSH-209ENST00000639689 LAMC3Q9Y6N6 1575 aa27.58■■■□□ 2.01
GCSH-209ENST00000639689 PRXQ9BXM0 1461 aa27.57■■■□□ 2
GCSH-209ENST00000639689 KIF27Q86VH2 1401 aa27.57■■■□□ 2
GCSH-209ENST00000639689 ERICH3Q5RHP9 1530 aa27.55■■■□□ 2
GCSH-209ENST00000639689 FGD5Q6ZNL6 1462 aa27.51■■■□□ 2
GCSH-209ENST00000639689 HRCP23327 699 aa27.5■■□□□ 1.99
GCSH-209ENST00000639689 DNAJC5BQ9UF47 199 aa27.49■■□□□ 1.99
GCSH-209ENST00000639689 DNMBPQ6XZF7 1577 aa27.49■■□□□ 1.99
GCSH-209ENST00000639689 TOPBP1Q92547 1522 aa27.41■■□□□ 1.98
GCSH-209ENST00000639689 CUX2O14529 1486 aa27.41■■□□□ 1.98
GCSH-209ENST00000639689 CLIP1P30622 1438 aa27.4■■□□□ 1.98
GCSH-209ENST00000639689 POLA1P09884 1462 aaPredicted RBP27.33■■□□□ 1.97
GCSH-209ENST00000639689 IGF1RP08069 1367 aa27.33■■□□□ 1.97
GCSH-209ENST00000639689 PPARGC1BQ86YN6 1023 aaKnown RBP27.32■■□□□ 1.96
GCSH-209ENST00000639689 PDS5BQ9NTI5 1447 aa27.31■■□□□ 1.96
GCSH-209ENST00000639689 URB2Q14146 1524 aaKnown RBP27.31■■□□□ 1.96
GCSH-209ENST00000639689 ABCA10Q8WWZ4 1543 aa27.29■■□□□ 1.96
GCSH-209ENST00000639689 KIF21AQ7Z4S6 1674 aa27.28■■□□□ 1.96
GCSH-209ENST00000639689 RAD54L2Q9Y4B4 1467 aa27.25■■□□□ 1.95
GCSH-209ENST00000639689 VPS8Q8N3P4 1428 aa27.25■■□□□ 1.95
GCSH-209ENST00000639689 WDR97A6NE52 1622 aa27.21■■□□□ 1.95
GCSH-209ENST00000639689 CARMIL1Q5VZK9 1371 aa27.16■■□□□ 1.94
GCSH-209ENST00000639689 ARAP1Q96P48 1450 aa27.13■■□□□ 1.93
GCSH-209ENST00000639689 ABCA5Q8WWZ7 1642 aa27.06■■□□□ 1.92
GCSH-209ENST00000639689 CUL7Q14999 1698 aa27.05■■□□□ 1.92
GCSH-209ENST00000639689 RANGAP1P46060 587 aaPredicted RBP27.05■■□□□ 1.92
GCSH-209ENST00000639689 ARHGAP35Q9NRY4 1499 aa27.03■■□□□ 1.92
GCSH-209ENST00000639689 TARBP1Q13395 1621 aaKnown RBP27.01■■□□□ 1.91
GCSH-209ENST00000639689 MRC2Q9UBG0 1479 aa26.97■■□□□ 1.91
GCSH-209ENST00000639689 TTBK1Q5TCY1 1321 aaPredicted RBP26.97■■□□□ 1.91
GCSH-209ENST00000639689 GAPVD1Q14C86 1478 aa26.92■■□□□ 1.9
GCSH-209ENST00000639689 TDRD9Q8NDG6 1382 aaKnown RBP26.91■■□□□ 1.9
GCSH-209ENST00000639689 CTTNBP2Q8WZ74 1663 aa26.85■■□□□ 1.89
GCSH-209ENST00000639689 APLP2Q06481 763 aa26.85■■□□□ 1.89
GCSH-209ENST00000639689 WDR62O43379 1518 aa26.85■■□□□ 1.89
GCSH-209ENST00000639689 ZEB1P37275 1124 aaPredicted RBP26.82■■□□□ 1.88
GCSH-209ENST00000639689 PBRM1Q86U86 1689 aa26.78■■□□□ 1.88
GCSH-209ENST00000639689 EFCAB5A4FU69 1503 aa26.74■■□□□ 1.87
GCSH-209ENST00000639689 IFT140Q96RY7 1462 aa26.71■■□□□ 1.87
GCSH-209ENST00000639689 MAP3K1Q13233 1512 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms