RNA–Protein interactions for RNA: ENST00000322985.9

PODXL-201, Transcript of podocalyxin like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PODXL, Length 2,011 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PODXL-201ENST00000322985 NISCHQ9Y2I1 1504 aa38.74■■■■□ 3.79
PODXL-201ENST00000322985 CCDC180Q9P1Z9 1646 aa33.66■■■□□ 2.98
PODXL-201ENST00000322985 ZCCHC6Q5VYS8 1495 aaKnown RBP32.57■■■□□ 2.81
PODXL-201ENST00000322985 DCAF8L2P0C7V8 631 aa32■■■□□ 2.71
PODXL-201ENST00000322985 DCAF1Q9Y4B6 1507 aa32■■■□□ 2.71
PODXL-201ENST00000322985 ABCC9O60706 1549 aa31.78■■■□□ 2.68
PODXL-201ENST00000322985 SHROOM4Q9ULL8 1493 aa31.78■■■□□ 2.68
PODXL-201ENST00000322985 MYO15BQ96JP2 1530 aa31.55■■■□□ 2.64
PODXL-201ENST00000322985 NACADO15069 1562 aa31.33■■■□□ 2.61
PODXL-201ENST00000322985 SCRIBQ14160 1630 aa31.05■■■□□ 2.56
PODXL-201ENST00000322985 RB1CC1Q8TDY2 1594 aa31.02■■■□□ 2.56
PODXL-201ENST00000322985 SUPT5HO00267 1087 aaKnown RBP30.64■■■□□ 2.5
PODXL-201ENST00000322985 UNC13AQ9UPW8 1703 aa30.48■■■□□ 2.47
PODXL-201ENST00000322985 BICRAQ9NZM4 1560 aa30.15■■■□□ 2.42
PODXL-201ENST00000322985 CECR2Q9BXF3 1484 aa30.15■■■□□ 2.42
PODXL-201ENST00000322985 RSF1Q96T23 1441 aaPredicted RBP30.14■■■□□ 2.42
PODXL-201ENST00000322985 PABPN1Q86U42 306 aaKnown RBP eCLIP30.03■■■□□ 2.4
PODXL-201ENST00000322985 MROH2BQ7Z745 1585 aa29.97■■■□□ 2.39
PODXL-201ENST00000322985 BAZ1AQ9NRL2 1556 aaPredicted RBP29.88■■■□□ 2.37
PODXL-201ENST00000322985 SMARCA4P51532 1647 aa29.75■■■□□ 2.35
PODXL-201ENST00000322985 WIZO95785 1651 aa29.74■■■□□ 2.35
PODXL-201ENST00000322985 CHIC1Q5VXU3 224 aa29.54■■■□□ 2.32
PODXL-201ENST00000322985 TOP2AP11388 1531 aaKnown RBP29.38■■■□□ 2.29
PODXL-201ENST00000322985 PEG3Q9GZU2 1588 aa29.37■■■□□ 2.29
PODXL-201ENST00000322985 ATAD2BQ9ULI0 1458 aa29.23■■■□□ 2.27
PODXL-201ENST00000322985 EIF4G1Q04637 1599 aaKnown RBP29.21■■■□□ 2.27
PODXL-201ENST00000322985 SMARCA2P51531 1590 aa29.18■■■□□ 2.26
PODXL-201ENST00000322985 CCDC88BA6NC98 1476 aa29.12■■■□□ 2.25
PODXL-201ENST00000322985 BAZ1BQ9UIG0 1483 aaKnown RBP29.06■■■□□ 2.24
PODXL-201ENST00000322985 NCAPD3P42695 1498 aa28.94■■■□□ 2.22
PODXL-201ENST00000322985 HMGXB3Q12766 1538 aa28.89■■■□□ 2.22
PODXL-201ENST00000322985 TRIM41Q8WV44 630 aa28.77■■■□□ 2.2
PODXL-201ENST00000322985 CC2D2AQ9P2K1 1620 aa28.75■■■□□ 2.19
PODXL-201ENST00000322985 ABCC8Q09428 1581 aa28.58■■■□□ 2.17
PODXL-201ENST00000322985 LOC105371045A0A1W2PR82 267 aa28.55■■■□□ 2.16
PODXL-201ENST00000322985 CFTRP13569 1480 aa28.35■■■□□ 2.13
PODXL-201ENST00000322985 WRNQ14191 1432 aaPredicted RBP eCLIP28.35■■■□□ 2.13
PODXL-201ENST00000322985 FAM9AQ8IZU1 332 aaPredicted RBP28.3■■■□□ 2.12
PODXL-201ENST00000322985 SYNJ1O43426 1573 aa28.25■■■□□ 2.11
PODXL-201ENST00000322985 CADPSQ9ULU8 1353 aa28.22■■■□□ 2.11
PODXL-201ENST00000322985 PRDM2Q13029 1718 aa28.19■■■□□ 2.1
PODXL-201ENST00000322985 TOP2BQ02880 1626 aa28.09■■■□□ 2.09
PODXL-201ENST00000322985 SOGA1O94964 1423 aa28.08■■■□□ 2.09
PODXL-201ENST00000322985 DNAJC5BQ9UF47 199 aa28.08■■■□□ 2.09
PODXL-201ENST00000322985 BIVM-ERCC5R4GMW8 1640 aa28.05■■■□□ 2.08
PODXL-201ENST00000322985 CUX1P39880 1505 aa28■■■□□ 2.07
PODXL-201ENST00000322985 RUSC2Q8N2Y8 1516 aa27.99■■■□□ 2.07
PODXL-201ENST00000322985 NESP48681 1621 aa27.97■■■□□ 2.07
PODXL-201ENST00000322985 EEA1Q15075 1411 aa27.97■■■□□ 2.07
PODXL-201ENST00000322985 EHMT2Q96KQ7 1210 aa27.92■■■□□ 2.06
PODXL-201ENST00000322985 LAMC3Q9Y6N6 1575 aa27.91■■■□□ 2.06
PODXL-201ENST00000322985 FANCD2Q9BXW9 1451 aa27.91■■■□□ 2.06
PODXL-201ENST00000322985 PCGF6Q9BYE7 350 aa27.91■■■□□ 2.06
PODXL-201ENST00000322985 CSRNP3Q8WYN3 585 aa27.87■■■□□ 2.05
PODXL-201ENST00000322985 CEP164Q9UPV0 1460 aa27.7■■■□□ 2.02
PODXL-201ENST00000322985 PDS5BQ9NTI5 1447 aa27.69■■■□□ 2.02
PODXL-201ENST00000322985 DNMBPQ6XZF7 1577 aa27.67■■■□□ 2.02
PODXL-201ENST00000322985 FGD5Q6ZNL6 1462 aa27.66■■■□□ 2.02
PODXL-201ENST00000322985 TOPBP1Q92547 1522 aa27.63■■■□□ 2.01
PODXL-201ENST00000322985 KIF21BO75037 1637 aa27.63■■■□□ 2.01
PODXL-201ENST00000322985 GOLGA3Q08378 1498 aa27.62■■■□□ 2.01
PODXL-201ENST00000322985 TRIM26Q12899 539 aaPredicted RBP27.61■■■□□ 2.01
PODXL-201ENST00000322985 KIF21AQ7Z4S6 1674 aa27.61■■■□□ 2.01
PODXL-201ENST00000322985 KIF27Q86VH2 1401 aa27.6■■■□□ 2.01
PODXL-201ENST00000322985 HRCP23327 699 aa27.58■■■□□ 2.01
PODXL-201ENST00000322985 TNIKQ9UKE5 1360 aa27.57■■■□□ 2
PODXL-201ENST00000322985 URB2Q14146 1524 aaKnown RBP27.57■■■□□ 2
PODXL-201ENST00000322985 UBTFP17480 764 aaKnown RBP27.53■■■□□ 2
PODXL-201ENST00000322985 CUX2O14529 1486 aa27.51■■□□□ 1.99
PODXL-201ENST00000322985 POLA1P09884 1462 aaPredicted RBP27.51■■□□□ 1.99
PODXL-201ENST00000322985 RAPGEF2Q9Y4G8 1499 aa27.5■■□□□ 1.99
PODXL-201ENST00000322985 PRXQ9BXM0 1461 aa27.47■■□□□ 1.99
PODXL-201ENST00000322985 RAD54L2Q9Y4B4 1467 aa27.45■■□□□ 1.99
PODXL-201ENST00000322985 CEP162Q5TB80 1403 aa27.45■■□□□ 1.99
PODXL-201ENST00000322985 ERICH3Q5RHP9 1530 aa27.41■■□□□ 1.98
PODXL-201ENST00000322985 ABCA10Q8WWZ4 1543 aa27.41■■□□□ 1.98
PODXL-201ENST00000322985 IGF1RP08069 1367 aa27.37■■□□□ 1.97
PODXL-201ENST00000322985 MRC2Q9UBG0 1479 aa27.34■■□□□ 1.97
PODXL-201ENST00000322985 WDR97A6NE52 1622 aa27.31■■□□□ 1.96
PODXL-201ENST00000322985 CARMIL1Q5VZK9 1371 aa27.22■■□□□ 1.95
PODXL-201ENST00000322985 TARBP1Q13395 1621 aaKnown RBP27.21■■□□□ 1.95
PODXL-201ENST00000322985 PPARGC1BQ86YN6 1023 aaKnown RBP27.2■■□□□ 1.94
PODXL-201ENST00000322985 CLIP1P30622 1438 aa27.2■■□□□ 1.94
PODXL-201ENST00000322985 WDR62O43379 1518 aa27.19■■□□□ 1.94
PODXL-201ENST00000322985 ERCC6Q03468 1493 aa27.19■■□□□ 1.94
PODXL-201ENST00000322985 ABCA5Q8WWZ7 1642 aa27.18■■□□□ 1.94
PODXL-201ENST00000322985 TDRD9Q8NDG6 1382 aaKnown RBP27.17■■□□□ 1.94
PODXL-201ENST00000322985 GAPVD1Q14C86 1478 aa27.11■■□□□ 1.93
PODXL-201ENST00000322985 CUL7Q14999 1698 aa27.1■■□□□ 1.93
PODXL-201ENST00000322985 THOC2Q8NI27 1593 aaKnown RBP27.09■■□□□ 1.93
PODXL-201ENST00000322985 RANGAP1P46060 587 aaPredicted RBP27.08■■□□□ 1.93
PODXL-201ENST00000322985 IFT140Q96RY7 1462 aa27.02■■□□□ 1.92
PODXL-201ENST00000322985 VPS8Q8N3P4 1428 aa26.98■■□□□ 1.91
PODXL-201ENST00000322985 AQRO60306 1485 aaKnown RBP eCLIP26.97■■□□□ 1.91
PODXL-201ENST00000322985 PBRM1Q86U86 1689 aa26.95■■□□□ 1.9
PODXL-201ENST00000322985 ARAP1Q96P48 1450 aa26.94■■□□□ 1.9
PODXL-201ENST00000322985 ZNF608Q9ULD9 1512 aaPredicted RBP26.93■■□□□ 1.9
PODXL-201ENST00000322985 ARHGAP35Q9NRY4 1499 aa26.9■■□□□ 1.9
PODXL-201ENST00000322985 GRIN2BQ13224 1484 aa26.86■■□□□ 1.89
PODXL-201ENST00000322985 CTTNBP2Q8WZ74 1663 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms