RNA–Protein interactions for RNA: ENST00000453838.2

KRT18P28-201, Transcript of keratin 18 pseudogene 28, humanhuman

BASIC

Gene KRT18P28, Length 1,332 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18P28-201ENST00000453838 NISCHQ9Y2I1 1504 aa41.67■■■■■ 4.26
KRT18P28-201ENST00000453838 ABCC9O60706 1549 aa37.84■■■■□ 3.65
KRT18P28-201ENST00000453838 CCDC180Q9P1Z9 1646 aa37.37■■■■□ 3.57
KRT18P28-201ENST00000453838 DNAJC5BQ9UF47 199 aa35.82■■■■□ 3.32
KRT18P28-201ENST00000453838 RB1CC1Q8TDY2 1594 aa35.8■■■■□ 3.32
KRT18P28-201ENST00000453838 NACADO15069 1562 aa35.5■■■■□ 3.27
KRT18P28-201ENST00000453838 DCAF8L2P0C7V8 631 aa35.48■■■■□ 3.27
KRT18P28-201ENST00000453838 PABPN1Q86U42 306 aaKnown RBP eCLIP35.28■■■■□ 3.24
KRT18P28-201ENST00000453838 MYO15BQ96JP2 1530 aa34.91■■■■□ 3.18
KRT18P28-201ENST00000453838 UNC13AQ9UPW8 1703 aa34.81■■■■□ 3.16
KRT18P28-201ENST00000453838 BICRAQ9NZM4 1560 aa34.76■■■■□ 3.15
KRT18P28-201ENST00000453838 ZCCHC6Q5VYS8 1495 aaKnown RBP34.44■■■■□ 3.1
KRT18P28-201ENST00000453838 DCAF1Q9Y4B6 1507 aa34.36■■■■□ 3.09
KRT18P28-201ENST00000453838 SHROOM4Q9ULL8 1493 aa34.26■■■■□ 3.08
KRT18P28-201ENST00000453838 SCRIBQ14160 1630 aa34.13■■■■□ 3.05
KRT18P28-201ENST00000453838 CECR2Q9BXF3 1484 aa34.1■■■■□ 3.05
KRT18P28-201ENST00000453838 CC2D2AQ9P2K1 1620 aa34.07■■■■□ 3.05
KRT18P28-201ENST00000453838 EIF4G1Q04637 1599 aaKnown RBP33.94■■■■□ 3.02
KRT18P28-201ENST00000453838 DNAJC5Q9H3Z4 198 aa33.09■■■□□ 2.89
KRT18P28-201ENST00000453838 NCAPD3P42695 1498 aa32.84■■■□□ 2.85
KRT18P28-201ENST00000453838 ERCC6Q03468 1493 aa32.69■■■□□ 2.82
KRT18P28-201ENST00000453838 ATAD2BQ9ULI0 1458 aa32.69■■■□□ 2.82
KRT18P28-201ENST00000453838 CUX2O14529 1486 aa32.67■■■□□ 2.82
KRT18P28-201ENST00000453838 SMARCA2P51531 1590 aa32.54■■■□□ 2.8
KRT18P28-201ENST00000453838 SMARCA4P51532 1647 aa32.5■■■□□ 2.79
KRT18P28-201ENST00000453838 HMGXB3Q12766 1538 aa32.48■■■□□ 2.79
KRT18P28-201ENST00000453838 NESP48681 1621 aa32.4■■■□□ 2.78
KRT18P28-201ENST00000453838 BAZ1BQ9UIG0 1483 aaKnown RBP32.36■■■□□ 2.77
KRT18P28-201ENST00000453838 BAZ1AQ9NRL2 1556 aaPredicted RBP32.34■■■□□ 2.77
KRT18P28-201ENST00000453838 PEG3Q9GZU2 1588 aa32.18■■■□□ 2.74
KRT18P28-201ENST00000453838 MROH2BQ7Z745 1585 aa32.12■■■□□ 2.73
KRT18P28-201ENST00000453838 LAMC3Q9Y6N6 1575 aa32.05■■■□□ 2.72
KRT18P28-201ENST00000453838 THOC2Q8NI27 1593 aaKnown RBP32.02■■■□□ 2.72
KRT18P28-201ENST00000453838 PDS5BQ9NTI5 1447 aa31.99■■■□□ 2.71
KRT18P28-201ENST00000453838 CADPSQ9ULU8 1353 aa31.86■■■□□ 2.69
KRT18P28-201ENST00000453838 KIF21AQ7Z4S6 1674 aa31.82■■■□□ 2.68
KRT18P28-201ENST00000453838 MRC2Q9UBG0 1479 aa31.69■■■□□ 2.66
KRT18P28-201ENST00000453838 WIZO95785 1651 aa31.65■■■□□ 2.66
KRT18P28-201ENST00000453838 WDR62O43379 1518 aa31.57■■■□□ 2.64
KRT18P28-201ENST00000453838 TRIM41Q8WV44 630 aa31.55■■■□□ 2.64
KRT18P28-201ENST00000453838 CEP164Q9UPV0 1460 aa31.5■■■□□ 2.63
KRT18P28-201ENST00000453838 FANCD2Q9BXW9 1451 aa31.47■■■□□ 2.63
KRT18P28-201ENST00000453838 CFTRP13569 1480 aa31.39■■■□□ 2.62
KRT18P28-201ENST00000453838 RSF1Q96T23 1441 aaPredicted RBP31.39■■■□□ 2.62
KRT18P28-201ENST00000453838 OSCARQ8IYS5 282 aa31.26■■■□□ 2.6
KRT18P28-201ENST00000453838 TOP2AP11388 1531 aaKnown RBP31.26■■■□□ 2.6
KRT18P28-201ENST00000453838 URB2Q14146 1524 aaKnown RBP31.21■■■□□ 2.59
KRT18P28-201ENST00000453838 CCDC88BA6NC98 1476 aa30.98■■■□□ 2.55
KRT18P28-201ENST00000453838 IFT140Q96RY7 1462 aa30.9■■■□□ 2.54
KRT18P28-201ENST00000453838 ZNF608Q9ULD9 1512 aaPredicted RBP30.89■■■□□ 2.53
KRT18P28-201ENST00000453838 TOPBP1Q92547 1522 aa30.82■■■□□ 2.52
KRT18P28-201ENST00000453838 PRDM2Q13029 1718 aa30.8■■■□□ 2.52
KRT18P28-201ENST00000453838 ABCC8Q09428 1581 aa30.74■■■□□ 2.51
KRT18P28-201ENST00000453838 RIMBP3CA6NJZ7 1639 aa30.71■■■□□ 2.51
KRT18P28-201ENST00000453838 RIMBP3BA6NNM3 1639 aa30.71■■■□□ 2.51
KRT18P28-201ENST00000453838 RIMBP3Q9UFD9 1639 aa30.71■■■□□ 2.51
KRT18P28-201ENST00000453838 DNMBPQ6XZF7 1577 aa30.64■■■□□ 2.5
KRT18P28-201ENST00000453838 ARHGEF11O15085 1522 aa30.64■■■□□ 2.49
KRT18P28-201ENST00000453838 AQRO60306 1485 aaKnown RBP eCLIP30.61■■■□□ 2.49
KRT18P28-201ENST00000453838 EIF4G3O43432 1585 aaKnown RBP30.61■■■□□ 2.49
KRT18P28-201ENST00000453838 CYB5RLQ6IPT4 315 aa30.56■■■□□ 2.48
KRT18P28-201ENST00000453838 FBLN2P98095 1184 aa30.54■■■□□ 2.48
KRT18P28-201ENST00000453838 TARBP1Q13395 1621 aaKnown RBP30.5■■■□□ 2.47
KRT18P28-201ENST00000453838 POLA1P09884 1462 aaPredicted RBP30.49■■■□□ 2.47
KRT18P28-201ENST00000453838 RAD54L2Q9Y4B4 1467 aa30.43■■■□□ 2.46
KRT18P28-201ENST00000453838 TDRD9Q8NDG6 1382 aaKnown RBP30.42■■■□□ 2.46
KRT18P28-201ENST00000453838 SOGA1O94964 1423 aa30.41■■■□□ 2.46
KRT18P28-201ENST00000453838 CHD1O14646 1710 aa30.37■■■□□ 2.45
KRT18P28-201ENST00000453838 ARAP1Q96P48 1450 aa30.34■■■□□ 2.45
KRT18P28-201ENST00000453838 TRHP20396 242 aaPredicted RBP30.33■■■□□ 2.45
KRT18P28-201ENST00000453838 FGD5Q6ZNL6 1462 aa30.26■■■□□ 2.43
KRT18P28-201ENST00000453838 CHMP7Q8WUX9 453 aaPredicted RBP30.25■■■□□ 2.43
KRT18P28-201ENST00000453838 SNAPC4Q5SXM2 1469 aa30.24■■■□□ 2.43
KRT18P28-201ENST00000453838 CUX1P39880 1505 aa30.18■■■□□ 2.42
KRT18P28-201ENST00000453838 WDR97A6NE52 1622 aa30.14■■■□□ 2.42
KRT18P28-201ENST00000453838 GRIN2BQ13224 1484 aa30.14■■■□□ 2.41
KRT18P28-201ENST00000453838 MAGI1Q96QZ7 1491 aaPredicted RBP30.14■■■□□ 2.41
KRT18P28-201ENST00000453838 CLASP1Q7Z460 1538 aa30.11■■■□□ 2.41
KRT18P28-201ENST00000453838 SYNJ1O43426 1573 aa30.07■■■□□ 2.4
KRT18P28-201ENST00000453838 SYNJ2O15056 1496 aa30.05■■■□□ 2.4
KRT18P28-201ENST00000453838 GAPVD1Q14C86 1478 aa29.99■■■□□ 2.39
KRT18P28-201ENST00000453838 SUPT5HO00267 1087 aaKnown RBP29.91■■■□□ 2.38
KRT18P28-201ENST00000453838 ABCA10Q8WWZ4 1543 aa29.9■■■□□ 2.38
KRT18P28-201ENST00000453838 PBRM1Q86U86 1689 aa29.83■■■□□ 2.37
KRT18P28-201ENST00000453838 ABCA5Q8WWZ7 1642 aa29.8■■■□□ 2.36
KRT18P28-201ENST00000453838 WRNQ14191 1432 aaPredicted RBP eCLIP29.78■■■□□ 2.36
KRT18P28-201ENST00000453838 GRIN2AQ12879 1464 aa29.73■■■□□ 2.35
KRT18P28-201ENST00000453838 ERCC6L2Q5T890 1561 aa29.65■■■□□ 2.34
KRT18P28-201ENST00000453838 NUP160Q12769 1436 aa29.64■■■□□ 2.34
KRT18P28-201ENST00000453838 AEBP2Q6ZN18 517 aaPredicted RBP29.64■■■□□ 2.34
KRT18P28-201ENST00000453838 FHAD1B1AJZ9 1412 aa29.62■■■□□ 2.33
KRT18P28-201ENST00000453838 ADAMTS12P58397 1594 aa29.62■■■□□ 2.33
KRT18P28-201ENST00000453838 CEP170Q5SW79 1584 aa29.59■■■□□ 2.33
KRT18P28-201ENST00000453838 TOP2BQ02880 1626 aa29.57■■■□□ 2.32
KRT18P28-201ENST00000453838 BIVM-ERCC5R4GMW8 1640 aa29.53■■■□□ 2.32
KRT18P28-201ENST00000453838 ERICH3Q5RHP9 1530 aa29.49■■■□□ 2.31
KRT18P28-201ENST00000453838 SHROOM2Q13796 1616 aa29.45■■■□□ 2.31
KRT18P28-201ENST00000453838 PRG4Q92954 1404 aaPredicted RBP29.44■■■□□ 2.3
KRT18P28-201ENST00000453838 JPH4Q96JJ6 628 aa29.44■■■□□ 2.3
KRT18P28-201ENST00000453838 NPM1P06748 294 aaKnown RBP eCLIP29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms