RNA–Protein interactions for RNA: ENST00000588875.2

SEC11C-205, Transcript of SEC11 homolog C, signal peptidase complex subunit, humanhuman

TSL 2 BASIC

Gene SEC11C, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11C-205ENST00000588875 NISCHQ9Y2I1 1504 aa42.28■■■■■ 4.36
SEC11C-205ENST00000588875 ABCC9O60706 1549 aa38.53■■■■□ 3.76
SEC11C-205ENST00000588875 CCDC180Q9P1Z9 1646 aa37.98■■■■□ 3.67
SEC11C-205ENST00000588875 DNAJC5BQ9UF47 199 aa36.64■■■■□ 3.46
SEC11C-205ENST00000588875 RB1CC1Q8TDY2 1594 aa36.4■■■■□ 3.42
SEC11C-205ENST00000588875 NACADO15069 1562 aa36.07■■■■□ 3.37
SEC11C-205ENST00000588875 DCAF8L2P0C7V8 631 aa35.95■■■■□ 3.35
SEC11C-205ENST00000588875 PABPN1Q86U42 306 aaKnown RBP eCLIP35.89■■■■□ 3.34
SEC11C-205ENST00000588875 UNC13AQ9UPW8 1703 aa35.53■■■■□ 3.28
SEC11C-205ENST00000588875 MYO15BQ96JP2 1530 aa35.45■■■■□ 3.27
SEC11C-205ENST00000588875 BICRAQ9NZM4 1560 aa35.43■■■■□ 3.26
SEC11C-205ENST00000588875 ZCCHC6Q5VYS8 1495 aaKnown RBP34.93■■■■□ 3.18
SEC11C-205ENST00000588875 DCAF1Q9Y4B6 1507 aa34.86■■■■□ 3.17
SEC11C-205ENST00000588875 SHROOM4Q9ULL8 1493 aa34.83■■■■□ 3.17
SEC11C-205ENST00000588875 CECR2Q9BXF3 1484 aa34.74■■■■□ 3.15
SEC11C-205ENST00000588875 CC2D2AQ9P2K1 1620 aa34.73■■■■□ 3.15
SEC11C-205ENST00000588875 SCRIBQ14160 1630 aa34.66■■■■□ 3.14
SEC11C-205ENST00000588875 EIF4G1Q04637 1599 aaKnown RBP34.56■■■■□ 3.12
SEC11C-205ENST00000588875 DNAJC5Q9H3Z4 198 aa33.88■■■■□ 3.01
SEC11C-205ENST00000588875 NCAPD3P42695 1498 aa33.38■■■□□ 2.93
SEC11C-205ENST00000588875 CUX2O14529 1486 aa33.31■■■□□ 2.92
SEC11C-205ENST00000588875 ERCC6Q03468 1493 aa33.25■■■□□ 2.91
SEC11C-205ENST00000588875 ATAD2BQ9ULI0 1458 aa33.22■■■□□ 2.91
SEC11C-205ENST00000588875 SMARCA2P51531 1590 aa33.04■■■□□ 2.88
SEC11C-205ENST00000588875 HMGXB3Q12766 1538 aa33.02■■■□□ 2.88
SEC11C-205ENST00000588875 SMARCA4P51532 1647 aa33.01■■■□□ 2.87
SEC11C-205ENST00000588875 NESP48681 1621 aa33■■■□□ 2.87
SEC11C-205ENST00000588875 BAZ1BQ9UIG0 1483 aaKnown RBP32.83■■■□□ 2.85
SEC11C-205ENST00000588875 BAZ1AQ9NRL2 1556 aaPredicted RBP32.79■■■□□ 2.84
SEC11C-205ENST00000588875 PEG3Q9GZU2 1588 aa32.7■■■□□ 2.83
SEC11C-205ENST00000588875 THOC2Q8NI27 1593 aaKnown RBP32.66■■■□□ 2.82
SEC11C-205ENST00000588875 LAMC3Q9Y6N6 1575 aa32.61■■■□□ 2.81
SEC11C-205ENST00000588875 MROH2BQ7Z745 1585 aa32.6■■■□□ 2.81
SEC11C-205ENST00000588875 PDS5BQ9NTI5 1447 aa32.49■■■□□ 2.79
SEC11C-205ENST00000588875 KIF21AQ7Z4S6 1674 aa32.44■■■□□ 2.78
SEC11C-205ENST00000588875 CADPSQ9ULU8 1353 aa32.36■■■□□ 2.77
SEC11C-205ENST00000588875 MRC2Q9UBG0 1479 aa32.22■■■□□ 2.75
SEC11C-205ENST00000588875 TRIM41Q8WV44 630 aa32.21■■■□□ 2.75
SEC11C-205ENST00000588875 WDR62O43379 1518 aa32.14■■■□□ 2.74
SEC11C-205ENST00000588875 WIZO95785 1651 aa32.14■■■□□ 2.74
SEC11C-205ENST00000588875 CEP164Q9UPV0 1460 aa32■■■□□ 2.71
SEC11C-205ENST00000588875 FANCD2Q9BXW9 1451 aa31.96■■■□□ 2.71
SEC11C-205ENST00000588875 CFTRP13569 1480 aa31.89■■■□□ 2.7
SEC11C-205ENST00000588875 OSCARQ8IYS5 282 aa31.82■■■□□ 2.68
SEC11C-205ENST00000588875 RSF1Q96T23 1441 aaPredicted RBP31.8■■■□□ 2.68
SEC11C-205ENST00000588875 URB2Q14146 1524 aaKnown RBP31.74■■■□□ 2.67
SEC11C-205ENST00000588875 TOP2AP11388 1531 aaKnown RBP31.69■■■□□ 2.66
SEC11C-205ENST00000588875 ZNF608Q9ULD9 1512 aaPredicted RBP31.44■■■□□ 2.62
SEC11C-205ENST00000588875 CCDC88BA6NC98 1476 aa31.4■■■□□ 2.62
SEC11C-205ENST00000588875 IFT140Q96RY7 1462 aa31.4■■■□□ 2.62
SEC11C-205ENST00000588875 RIMBP3CA6NJZ7 1639 aa31.36■■■□□ 2.61
SEC11C-205ENST00000588875 RIMBP3BA6NNM3 1639 aa31.36■■■□□ 2.61
SEC11C-205ENST00000588875 RIMBP3Q9UFD9 1639 aa31.36■■■□□ 2.61
SEC11C-205ENST00000588875 PRDM2Q13029 1718 aa31.33■■■□□ 2.61
SEC11C-205ENST00000588875 TOPBP1Q92547 1522 aa31.3■■■□□ 2.6
SEC11C-205ENST00000588875 ARHGEF11O15085 1522 aa31.24■■■□□ 2.59
SEC11C-205ENST00000588875 ABCC8Q09428 1581 aa31.17■■■□□ 2.58
SEC11C-205ENST00000588875 EIF4G3O43432 1585 aaKnown RBP31.13■■■□□ 2.57
SEC11C-205ENST00000588875 CYB5RLQ6IPT4 315 aa31.13■■■□□ 2.57
SEC11C-205ENST00000588875 AQRO60306 1485 aaKnown RBP eCLIP31.12■■■□□ 2.573e-6■■□□□ 13.8
SEC11C-205ENST00000588875 DNMBPQ6XZF7 1577 aa31.11■■■□□ 2.57
SEC11C-205ENST00000588875 TARBP1Q13395 1621 aaKnown RBP31.04■■■□□ 2.56
SEC11C-205ENST00000588875 FBLN2P98095 1184 aa31■■■□□ 2.55
SEC11C-205ENST00000588875 POLA1P09884 1462 aaPredicted RBP30.97■■■□□ 2.55
SEC11C-205ENST00000588875 CHD1O14646 1710 aa30.95■■■□□ 2.55
SEC11C-205ENST00000588875 ARAP1Q96P48 1450 aa30.94■■■□□ 2.54
SEC11C-205ENST00000588875 RAD54L2Q9Y4B4 1467 aa30.9■■■□□ 2.54
SEC11C-205ENST00000588875 TRHP20396 242 aaPredicted RBP30.88■■■□□ 2.53
SEC11C-205ENST00000588875 TDRD9Q8NDG6 1382 aaKnown RBP30.88■■■□□ 2.53
SEC11C-205ENST00000588875 SOGA1O94964 1423 aa30.85■■■□□ 2.53
SEC11C-205ENST00000588875 SNAPC4Q5SXM2 1469 aa30.73■■■□□ 2.51
SEC11C-205ENST00000588875 FGD5Q6ZNL6 1462 aa30.71■■■□□ 2.51
SEC11C-205ENST00000588875 CHMP7Q8WUX9 453 aaPredicted RBP30.69■■■□□ 2.5
SEC11C-205ENST00000588875 CLASP1Q7Z460 1538 aa30.66■■■□□ 2.5
SEC11C-205ENST00000588875 CUX1P39880 1505 aa30.63■■■□□ 2.49
SEC11C-205ENST00000588875 WDR97A6NE52 1622 aa30.62■■■□□ 2.49
SEC11C-205ENST00000588875 MAGI1Q96QZ7 1491 aaPredicted RBP30.6■■■□□ 2.49
SEC11C-205ENST00000588875 GRIN2BQ13224 1484 aa30.59■■■□□ 2.49
SEC11C-205ENST00000588875 SYNJ1O43426 1573 aa30.57■■■□□ 2.48
SEC11C-205ENST00000588875 SYNJ2O15056 1496 aa30.53■■■□□ 2.48
SEC11C-205ENST00000588875 GAPVD1Q14C86 1478 aa30.44■■■□□ 2.46
SEC11C-205ENST00000588875 PBRM1Q86U86 1689 aa30.33■■■□□ 2.45
SEC11C-205ENST00000588875 ABCA10Q8WWZ4 1543 aa30.33■■■□□ 2.45
SEC11C-205ENST00000588875 ABCA5Q8WWZ7 1642 aa30.28■■■□□ 2.44
SEC11C-205ENST00000588875 AEBP2Q6ZN18 517 aaPredicted RBP30.25■■■□□ 2.43
SEC11C-205ENST00000588875 ERCC6L2Q5T890 1561 aa30.2■■■□□ 2.43
SEC11C-205ENST00000588875 GRIN2AQ12879 1464 aa30.19■■■□□ 2.42
SEC11C-205ENST00000588875 WRNQ14191 1432 aaPredicted RBP eCLIP30.14■■■□□ 2.42
SEC11C-205ENST00000588875 SUPT5HO00267 1087 aaKnown RBP30.13■■■□□ 2.41
SEC11C-205ENST00000588875 NUP160Q12769 1436 aa30.13■■■□□ 2.41
SEC11C-205ENST00000588875 CEP170Q5SW79 1584 aa30.1■■■□□ 2.41
SEC11C-205ENST00000588875 ADAMTS12P58397 1594 aa30.08■■■□□ 2.41
SEC11C-205ENST00000588875 FHAD1B1AJZ9 1412 aa30.04■■■□□ 2.4
SEC11C-205ENST00000588875 TOP2BQ02880 1626 aa29.98■■■□□ 2.39
SEC11C-205ENST00000588875 SHROOM2Q13796 1616 aa29.98■■■□□ 2.39
SEC11C-205ENST00000588875 BIVM-ERCC5R4GMW8 1640 aa29.96■■■□□ 2.39
SEC11C-205ENST00000588875 ERICH3Q5RHP9 1530 aa29.91■■■□□ 2.38
SEC11C-205ENST00000588875 PRG4Q92954 1404 aaPredicted RBP29.88■■■□□ 2.37
SEC11C-205ENST00000588875 JPH4Q96JJ6 628 aa29.88■■■□□ 2.37
SEC11C-205ENST00000588875 KIF13AQ9H1H9 1805 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms