RNA–Protein interactions for RNA: ENST00000442265.2

IRF3-204, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-204ENST00000442265 NISCHQ9Y2I1 1504 aa41.21■■■■■ 4.19
IRF3-204ENST00000442265 CCDC180Q9P1Z9 1646 aa36.83■■■■□ 3.49
IRF3-204ENST00000442265 ABCC9O60706 1549 aa36.46■■■■□ 3.43
IRF3-204ENST00000442265 RB1CC1Q8TDY2 1594 aa34.9■■■■□ 3.18
IRF3-204ENST00000442265 NACADO15069 1562 aa34.78■■■■□ 3.16
IRF3-204ENST00000442265 MYO15BQ96JP2 1530 aa34.5■■■■□ 3.11
IRF3-204ENST00000442265 DCAF8L2P0C7V8 631 aa34.5■■■■□ 3.11
IRF3-204ENST00000442265 ZCCHC6Q5VYS8 1495 aaKnown RBP34.22■■■■□ 3.07
IRF3-204ENST00000442265 DCAF1Q9Y4B6 1507 aa34.14■■■■□ 3.06
IRF3-204ENST00000442265 UNC13AQ9UPW8 1703 aa34.01■■■■□ 3.04
IRF3-204ENST00000442265 DNAJC5BQ9UF47 199 aa34.01■■■■□ 3.03
IRF3-204ENST00000442265 PABPN1Q86U42 306 aaKnown RBP eCLIP34■■■■□ 3.03
IRF3-204ENST00000442265 BICRAQ9NZM4 1560 aa33.89■■■■□ 3.02
IRF3-204ENST00000442265 SHROOM4Q9ULL8 1493 aa33.57■■■□□ 2.97
IRF3-204ENST00000442265 SCRIBQ14160 1630 aa33.47■■■□□ 2.95
IRF3-204ENST00000442265 EIF4G1Q04637 1599 aaKnown RBP33.01■■■□□ 2.88
IRF3-204ENST00000442265 CC2D2AQ9P2K1 1620 aa32.98■■■□□ 2.87
IRF3-204ENST00000442265 CECR2Q9BXF3 1484 aa32.86■■■□□ 2.85
IRF3-204ENST00000442265 NCAPD3P42695 1498 aa32.15■■■□□ 2.74
IRF3-204ENST00000442265 SMARCA4P51532 1647 aa32.04■■■□□ 2.72
IRF3-204ENST00000442265 ATAD2BQ9ULI0 1458 aa32.04■■■□□ 2.72
IRF3-204ENST00000442265 SMARCA2P51531 1590 aa31.96■■■□□ 2.71
IRF3-204ENST00000442265 BAZ1AQ9NRL2 1556 aaPredicted RBP31.96■■■□□ 2.71
IRF3-204ENST00000442265 HMGXB3Q12766 1538 aa31.9■■■□□ 2.7
IRF3-204ENST00000442265 PEG3Q9GZU2 1588 aa31.82■■■□□ 2.68
IRF3-204ENST00000442265 MROH2BQ7Z745 1585 aa31.73■■■□□ 2.67
IRF3-204ENST00000442265 BAZ1BQ9UIG0 1483 aaKnown RBP31.71■■■□□ 2.67
IRF3-204ENST00000442265 ERCC6Q03468 1493 aa31.46■■■□□ 2.63
IRF3-204ENST00000442265 NESP48681 1621 aa31.42■■■□□ 2.62
IRF3-204ENST00000442265 CUX2O14529 1486 aa31.4■■■□□ 2.62
IRF3-204ENST00000442265 LAMC3Q9Y6N6 1575 aa31.32■■■□□ 2.6
IRF3-204ENST00000442265 WIZO95785 1651 aa31.3■■■□□ 2.6
IRF3-204ENST00000442265 RSF1Q96T23 1441 aaPredicted RBP31.22■■■□□ 2.59
IRF3-204ENST00000442265 CADPSQ9ULU8 1353 aa31.16■■■□□ 2.58
IRF3-204ENST00000442265 PDS5BQ9NTI5 1447 aa31.15■■■□□ 2.58
IRF3-204ENST00000442265 THOC2Q8NI27 1593 aaKnown RBP31.07■■■□□ 2.56
IRF3-204ENST00000442265 DNAJC5Q9H3Z4 198 aa31.05■■■□□ 2.56
IRF3-204ENST00000442265 TOP2AP11388 1531 aaKnown RBP30.99■■■□□ 2.55
IRF3-204ENST00000442265 KIF21AQ7Z4S6 1674 aa30.98■■■□□ 2.55
IRF3-204ENST00000442265 CFTRP13569 1480 aa30.87■■■□□ 2.53
IRF3-204ENST00000442265 MRC2Q9UBG0 1479 aa30.82■■■□□ 2.52
IRF3-204ENST00000442265 WDR62O43379 1518 aa30.75■■■□□ 2.51
IRF3-204ENST00000442265 FANCD2Q9BXW9 1451 aa30.75■■■□□ 2.51
IRF3-204ENST00000442265 CEP164Q9UPV0 1460 aa30.75■■■□□ 2.51
IRF3-204ENST00000442265 CCDC88BA6NC98 1476 aa30.64■■■□□ 2.5
IRF3-204ENST00000442265 URB2Q14146 1524 aaKnown RBP30.48■■■□□ 2.47
IRF3-204ENST00000442265 PRDM2Q13029 1718 aa30.45■■■□□ 2.47
IRF3-204ENST00000442265 ABCC8Q09428 1581 aa30.21■■■□□ 2.43
IRF3-204ENST00000442265 TOPBP1Q92547 1522 aa30.21■■■□□ 2.43
IRF3-204ENST00000442265 IFT140Q96RY7 1462 aa30.16■■■□□ 2.42
IRF3-204ENST00000442265 DNMBPQ6XZF7 1577 aa30.12■■■□□ 2.41
IRF3-204ENST00000442265 ZNF608Q9ULD9 1512 aaPredicted RBP30.03■■■□□ 2.4
IRF3-204ENST00000442265 OSCARQ8IYS5 282 aa30■■■□□ 2.39
IRF3-204ENST00000442265 TARBP1Q13395 1621 aaKnown RBP29.93■■■□□ 2.38
IRF3-204ENST00000442265 SUPT5HO00267 1087 aaKnown RBP29.92■■■□□ 2.38
IRF3-204ENST00000442265 POLA1P09884 1462 aaPredicted RBP29.92■■■□□ 2.38
IRF3-204ENST00000442265 EIF4G3O43432 1585 aaKnown RBP29.86■■■□□ 2.37
IRF3-204ENST00000442265 AQRO60306 1485 aaKnown RBP eCLIP29.8■■■□□ 2.363e-9■■■■■ 31.5
IRF3-204ENST00000442265 SOGA1O94964 1423 aa29.79■■■□□ 2.36
IRF3-204ENST00000442265 CUX1P39880 1505 aa29.79■■■□□ 2.36
IRF3-204ENST00000442265 RAD54L2Q9Y4B4 1467 aa29.77■■■□□ 2.36
IRF3-204ENST00000442265 FGD5Q6ZNL6 1462 aa29.75■■■□□ 2.35
IRF3-204ENST00000442265 WDR97A6NE52 1622 aa29.69■■■□□ 2.34
IRF3-204ENST00000442265 TDRD9Q8NDG6 1382 aaKnown RBP29.67■■■□□ 2.34
IRF3-204ENST00000442265 TRIM41Q8WV44 630 aa29.65■■■□□ 2.34
IRF3-204ENST00000442265 CHD1O14646 1710 aa29.52■■■□□ 2.32
IRF3-204ENST00000442265 GRIN2BQ13224 1484 aa29.51■■■□□ 2.31
IRF3-204ENST00000442265 RIMBP3CA6NJZ7 1639 aa29.5■■■□□ 2.31
IRF3-204ENST00000442265 RIMBP3BA6NNM3 1639 aa29.5■■■□□ 2.31
IRF3-204ENST00000442265 RIMBP3Q9UFD9 1639 aa29.5■■■□□ 2.31
IRF3-204ENST00000442265 SNAPC4Q5SXM2 1469 aa29.49■■■□□ 2.31
IRF3-204ENST00000442265 MAGI1Q96QZ7 1491 aaPredicted RBP29.49■■■□□ 2.31
IRF3-204ENST00000442265 ABCA10Q8WWZ4 1543 aa29.49■■■□□ 2.31
IRF3-204ENST00000442265 FBLN2P98095 1184 aa29.48■■■□□ 2.31
IRF3-204ENST00000442265 ARHGEF11O15085 1522 aa29.48■■■□□ 2.31
IRF3-204ENST00000442265 GAPVD1Q14C86 1478 aa29.43■■■□□ 2.3
IRF3-204ENST00000442265 WRNQ14191 1432 aaPredicted RBP eCLIP29.42■■■□□ 2.3
IRF3-204ENST00000442265 TOP2BQ02880 1626 aa29.41■■■□□ 2.3
IRF3-204ENST00000442265 BIVM-ERCC5R4GMW8 1640 aa29.38■■■□□ 2.29
IRF3-204ENST00000442265 SYNJ2O15056 1496 aa29.38■■■□□ 2.29
IRF3-204ENST00000442265 CHMP7Q8WUX9 453 aaPredicted RBP29.38■■■□□ 2.29
IRF3-204ENST00000442265 ABCA5Q8WWZ7 1642 aa29.38■■■□□ 2.29
IRF3-204ENST00000442265 SYNJ1O43426 1573 aa29.34■■■□□ 2.29
IRF3-204ENST00000442265 CLASP1Q7Z460 1538 aa29.31■■■□□ 2.28
IRF3-204ENST00000442265 PBRM1Q86U86 1689 aa29.31■■■□□ 2.28
IRF3-204ENST00000442265 CYB5RLQ6IPT4 315 aa29.22■■■□□ 2.27
IRF3-204ENST00000442265 ARAP1Q96P48 1450 aa29.22■■■□□ 2.27
IRF3-204ENST00000442265 GRIN2AQ12879 1464 aa29.12■■■□□ 2.25
IRF3-204ENST00000442265 ERICH3Q5RHP9 1530 aa29.12■■■□□ 2.25
IRF3-204ENST00000442265 ADAMTS12P58397 1594 aa29.12■■■□□ 2.25
IRF3-204ENST00000442265 FHAD1B1AJZ9 1412 aa29.1■■■□□ 2.25
IRF3-204ENST00000442265 NUP160Q12769 1436 aa29.05■■■□□ 2.24
IRF3-204ENST00000442265 CEP170Q5SW79 1584 aa28.97■■■□□ 2.23
IRF3-204ENST00000442265 SHROOM2Q13796 1616 aa28.86■■■□□ 2.21
IRF3-204ENST00000442265 KIF27Q86VH2 1401 aa28.85■■■□□ 2.21
IRF3-204ENST00000442265 IGF1RP08069 1367 aa28.84■■■□□ 2.21
IRF3-204ENST00000442265 ERCC6L2Q5T890 1561 aa28.81■■■□□ 2.2
IRF3-204ENST00000442265 TRHP20396 242 aaPredicted RBP28.74■■■□□ 2.19
IRF3-204ENST00000442265 JPH4Q96JJ6 628 aa28.73■■■□□ 2.19
IRF3-204ENST00000442265 CUL7Q14999 1698 aa28.7■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms