Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNRPEP62304 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNRPEP62304 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SNRPEP62304 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNRPEP62304 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SNRPEP62304 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SNRPEP62304 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SNRPEP62304 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNRPEP62304 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNRPEP62304 MCRIP2P1-201ENST00000394346 511 ntBASIC12.89□□□□□ -0.35
SNRPEP62304 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC12.89□□□□□ -0.35
SNRPEP62304 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SNRPEP62304 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC12.89□□□□□ -0.35
SNRPEP62304 TRIR-202ENST00000588213 841 ntTSL 3 BASIC12.89□□□□□ -0.35
SNRPEP62304 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SNRPEP62304 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNRPEP62304 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNRPEP62304 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
SNRPEP62304 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SNRPEP62304 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNRPEP62304 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNRPEP62304 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNRPEP62304 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
SNRPEP62304 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.89□□□□□ -0.35
SNRPEP62304 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SNRPEP62304 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SNRPEP62304 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
SNRPEP62304 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SNRPEP62304 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC12.89□□□□□ -0.35
SNRPEP62304 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNRPEP62304 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNRPEP62304 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNRPEP62304 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SNRPEP62304 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SNRPEP62304 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.89□□□□□ -0.35
SNRPEP62304 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.88□□□□□ -0.35
SNRPEP62304 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SNRPEP62304 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SNRPEP62304 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SNRPEP62304 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SNRPEP62304 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SNRPEP62304 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNRPEP62304 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNRPEP62304 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNRPEP62304 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC12.88□□□□□ -0.35
SNRPEP62304 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.88□□□□□ -0.35
SNRPEP62304 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SNRPEP62304 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
SNRPEP62304 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNRPEP62304 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNRPEP62304 AC067750.1-201ENST00000608826 6545 ntBASIC12.88□□□□□ -0.35
SNRPEP62304 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNRPEP62304 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.88□□□□□ -0.35
SNRPEP62304 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
SNRPEP62304 KIRREL3-AS3-201ENST00000404882 831 ntBASIC12.88□□□□□ -0.35
SNRPEP62304 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC12.88□□□□□ -0.35
SNRPEP62304 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNRPEP62304 AC233992.3-201ENST00000607491 485 ntBASIC12.88□□□□□ -0.35
SNRPEP62304 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC12.88□□□□□ -0.35
SNRPEP62304 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNRPEP62304 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC12.88□□□□□ -0.35
SNRPEP62304 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC12.88□□□□□ -0.35
SNRPEP62304 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNRPEP62304 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNRPEP62304 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNRPEP62304 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
SNRPEP62304 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNRPEP62304 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SNRPEP62304 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.88□□□□□ -0.35
SNRPEP62304 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SNRPEP62304 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.88□□□□□ -0.35
SNRPEP62304 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC12.88□□□□□ -0.35
SNRPEP62304 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNRPEP62304 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.88□□□□□ -0.35
SNRPEP62304 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
SNRPEP62304 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
SNRPEP62304 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SNRPEP62304 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNRPEP62304 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.88□□□□□ -0.35
SNRPEP62304 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SNRPEP62304 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNRPEP62304 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
SNRPEP62304 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.87□□□□□ -0.35
SNRPEP62304 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
SNRPEP62304 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SNRPEP62304 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNRPEP62304 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNRPEP62304 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNRPEP62304 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNRPEP62304 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
SNRPEP62304 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNRPEP62304 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC12.87□□□□□ -0.35
SNRPEP62304 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
SNRPEP62304 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNRPEP62304 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SNRPEP62304 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
SNRPEP62304 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC12.87□□□□□ -0.35
SNRPEP62304 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC12.87□□□□□ -0.35
SNRPEP62304 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC12.87□□□□□ -0.35
SNRPEP62304 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms