RNA–Protein interactions for RNA: ENST00000438965.1

AL359258.1-201, humanhuman

TSL 1 (best) BASIC

Gene AL359258.1, Length 2,481 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL359258.1-201ENST00000438965 NISCHQ9Y2I1 1504 aa33.36■■■□□ 2.93
AL359258.1-201ENST00000438965 CCDC180Q9P1Z9 1646 aa28.62■■■□□ 2.17
AL359258.1-201ENST00000438965 ZCCHC6Q5VYS8 1495 aaKnown RBP28.12■■■□□ 2.09
AL359258.1-201ENST00000438965 SHROOM4Q9ULL8 1493 aa27.99■■■□□ 2.07
AL359258.1-201ENST00000438965 DCAF8L2P0C7V8 631 aa27.78■■■□□ 2.04
AL359258.1-201ENST00000438965 DCAF1Q9Y4B6 1507 aa27.43■■□□□ 1.98
AL359258.1-201ENST00000438965 SUPT5HO00267 1087 aaKnown RBP27.24■■□□□ 1.95
AL359258.1-201ENST00000438965 ABCC9O60706 1549 aa26.9■■□□□ 1.9
AL359258.1-201ENST00000438965 MYO15BQ96JP2 1530 aa26.85■■□□□ 1.89
AL359258.1-201ENST00000438965 SCRIBQ14160 1630 aa26.68■■□□□ 1.86
AL359258.1-201ENST00000438965 NACADO15069 1562 aa26.61■■□□□ 1.85
AL359258.1-201ENST00000438965 RB1CC1Q8TDY2 1594 aa26.28■■□□□ 1.8
AL359258.1-201ENST00000438965 CHIC1Q5VXU3 224 aa26.24■■□□□ 1.79
AL359258.1-201ENST00000438965 RSF1Q96T23 1441 aaPredicted RBP26.19■■□□□ 1.78
AL359258.1-201ENST00000438965 CECR2Q9BXF3 1484 aa26■■□□□ 1.75
AL359258.1-201ENST00000438965 MROH2BQ7Z745 1585 aa25.87■■□□□ 1.73
AL359258.1-201ENST00000438965 UNC13AQ9UPW8 1703 aa25.74■■□□□ 1.71
AL359258.1-201ENST00000438965 BAZ1AQ9NRL2 1556 aaPredicted RBP25.69■■□□□ 1.7
AL359258.1-201ENST00000438965 WIZO95785 1651 aa25.68■■□□□ 1.7
AL359258.1-201ENST00000438965 PABPN1Q86U42 306 aaKnown RBP eCLIP25.61■■□□□ 1.69
AL359258.1-201ENST00000438965 BICRAQ9NZM4 1560 aa25.5■■□□□ 1.67
AL359258.1-201ENST00000438965 SMARCA4P51532 1647 aa25.5■■□□□ 1.67
AL359258.1-201ENST00000438965 TRIM41Q8WV44 630 aa25.47■■□□□ 1.67
AL359258.1-201ENST00000438965 LOC105371045A0A1W2PR82 267 aa25.4■■□□□ 1.66
AL359258.1-201ENST00000438965 TOP2AP11388 1531 aaKnown RBP25.34■■□□□ 1.65
AL359258.1-201ENST00000438965 CCDC88BA6NC98 1476 aa25.2■■□□□ 1.62
AL359258.1-201ENST00000438965 FAM9AQ8IZU1 332 aaPredicted RBP25.17■■□□□ 1.62
AL359258.1-201ENST00000438965 SMARCA2P51531 1590 aa25.15■■□□□ 1.62
AL359258.1-201ENST00000438965 EIF4G1Q04637 1599 aaKnown RBP25.11■■□□□ 1.61
AL359258.1-201ENST00000438965 PEG3Q9GZU2 1588 aa25.06■■□□□ 1.6
AL359258.1-201ENST00000438965 ATAD2BQ9ULI0 1458 aa24.99■■□□□ 1.59
AL359258.1-201ENST00000438965 EHMT2Q96KQ7 1210 aa24.93■■□□□ 1.58
AL359258.1-201ENST00000438965 ABCC8Q09428 1581 aa24.92■■□□□ 1.58
AL359258.1-201ENST00000438965 BAZ1BQ9UIG0 1483 aaKnown RBP24.91■■□□□ 1.58
AL359258.1-201ENST00000438965 PCGF6Q9BYE7 350 aa24.89■■□□□ 1.58
AL359258.1-201ENST00000438965 WRNQ14191 1432 aaPredicted RBP eCLIP24.65■■□□□ 1.54
AL359258.1-201ENST00000438965 NCAPD3P42695 1498 aa24.62■■□□□ 1.53
AL359258.1-201ENST00000438965 SOGA1O94964 1423 aa24.61■■□□□ 1.53
AL359258.1-201ENST00000438965 TRIM26Q12899 539 aaPredicted RBP24.59■■□□□ 1.53
AL359258.1-201ENST00000438965 HMGXB3Q12766 1538 aa24.58■■□□□ 1.52
AL359258.1-201ENST00000438965 HRCP23327 699 aa24.54■■□□□ 1.52
AL359258.1-201ENST00000438965 EEA1Q15075 1411 aa24.5■■□□□ 1.51
AL359258.1-201ENST00000438965 CSRNP3Q8WYN3 585 aa24.48■■□□□ 1.51
AL359258.1-201ENST00000438965 SYNJ1O43426 1573 aa24.48■■□□□ 1.51
AL359258.1-201ENST00000438965 RUSC2Q8N2Y8 1516 aa24.47■■□□□ 1.51
AL359258.1-201ENST00000438965 UBTFP17480 764 aaKnown RBP24.34■■□□□ 1.49
AL359258.1-201ENST00000438965 TNIKQ9UKE5 1360 aa24.31■■□□□ 1.48
AL359258.1-201ENST00000438965 CEP162Q5TB80 1403 aa24.29■■□□□ 1.48
AL359258.1-201ENST00000438965 CFTRP13569 1480 aa24.27■■□□□ 1.48
AL359258.1-201ENST00000438965 GOLGA3Q08378 1498 aa24.26■■□□□ 1.47
AL359258.1-201ENST00000438965 TOP2BQ02880 1626 aa24.26■■□□□ 1.47
AL359258.1-201ENST00000438965 PPARGC1BQ86YN6 1023 aaKnown RBP24.26■■□□□ 1.47
AL359258.1-201ENST00000438965 CC2D2AQ9P2K1 1620 aa24.22■■□□□ 1.47
AL359258.1-201ENST00000438965 CEP164Q9UPV0 1460 aa24.2■■□□□ 1.46
AL359258.1-201ENST00000438965 BIVM-ERCC5R4GMW8 1640 aa24.17■■□□□ 1.46
AL359258.1-201ENST00000438965 CUX1P39880 1505 aa24.13■■□□□ 1.45
AL359258.1-201ENST00000438965 KIF21BO75037 1637 aa24.12■■□□□ 1.45
AL359258.1-201ENST00000438965 CADPSQ9ULU8 1353 aa24.11■■□□□ 1.45
AL359258.1-201ENST00000438965 RAPGEF2Q9Y4G8 1499 aa24.05■■□□□ 1.44
AL359258.1-201ENST00000438965 TTBK1Q5TCY1 1321 aaPredicted RBP24■■□□□ 1.43
AL359258.1-201ENST00000438965 PRDM2Q13029 1718 aa23.98■■□□□ 1.43
AL359258.1-201ENST00000438965 CLIP1P30622 1438 aa23.96■■□□□ 1.43
AL359258.1-201ENST00000438965 KIF27Q86VH2 1401 aa23.95■■□□□ 1.43
AL359258.1-201ENST00000438965 RANGAP1P46060 587 aaPredicted RBP23.93■■□□□ 1.42
AL359258.1-201ENST00000438965 PRXQ9BXM0 1461 aa23.9■■□□□ 1.42
AL359258.1-201ENST00000438965 FANCD2Q9BXW9 1451 aa23.86■■□□□ 1.41
AL359258.1-201ENST00000438965 ZEB1P37275 1124 aaPredicted RBP23.86■■□□□ 1.41
AL359258.1-201ENST00000438965 ERICH3Q5RHP9 1530 aa23.86■■□□□ 1.41
AL359258.1-201ENST00000438965 CUX2O14529 1486 aa23.8■■□□□ 1.4
AL359258.1-201ENST00000438965 FGD5Q6ZNL6 1462 aa23.8■■□□□ 1.4
AL359258.1-201ENST00000438965 VPS8Q8N3P4 1428 aa23.79■■□□□ 1.4
AL359258.1-201ENST00000438965 NESP48681 1621 aa23.79■■□□□ 1.4
AL359258.1-201ENST00000438965 APLP2Q06481 763 aa23.73■■□□□ 1.39
AL359258.1-201ENST00000438965 IGF1RP08069 1367 aa23.71■■□□□ 1.39
AL359258.1-201ENST00000438965 DNAJC5BQ9UF47 199 aa23.68■■□□□ 1.38
AL359258.1-201ENST00000438965 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.67■■□□□ 1.38
AL359258.1-201ENST00000438965 DNMBPQ6XZF7 1577 aa23.65■■□□□ 1.38
AL359258.1-201ENST00000438965 LAMC3Q9Y6N6 1575 aa23.65■■□□□ 1.38
AL359258.1-201ENST00000438965 TOPBP1Q92547 1522 aa23.63■■□□□ 1.37
AL359258.1-201ENST00000438965 CCER1Q8TC90 406 aaPredicted RBP23.62■■□□□ 1.37
AL359258.1-201ENST00000438965 CARMIL1Q5VZK9 1371 aa23.62■■□□□ 1.37
AL359258.1-201ENST00000438965 ARAP1Q96P48 1450 aa23.6■■□□□ 1.37
AL359258.1-201ENST00000438965 RAD54L2Q9Y4B4 1467 aa23.6■■□□□ 1.37
AL359258.1-201ENST00000438965 POLA1P09884 1462 aaPredicted RBP23.59■■□□□ 1.37
AL359258.1-201ENST00000438965 PDS5BQ9NTI5 1447 aa23.55■■□□□ 1.36
AL359258.1-201ENST00000438965 ABCA10Q8WWZ4 1543 aa23.53■■□□□ 1.36
AL359258.1-201ENST00000438965 URB2Q14146 1524 aaKnown RBP23.51■■□□□ 1.35
AL359258.1-201ENST00000438965 ARHGAP35Q9NRY4 1499 aa23.5■■□□□ 1.35
AL359258.1-201ENST00000438965 HNRNPUL2Q1KMD3 747 aaKnown RBP23.44■■□□□ 1.34
AL359258.1-201ENST00000438965 KANK4Q5T7N3 995 aaPredicted RBP23.4■■□□□ 1.34
AL359258.1-201ENST00000438965 PELP1Q8IZL8 1130 aaKnown RBP23.37■■□□□ 1.33
AL359258.1-201ENST00000438965 KIF21AQ7Z4S6 1674 aa23.36■■□□□ 1.33
AL359258.1-201ENST00000438965 TDRD9Q8NDG6 1382 aaKnown RBP23.36■■□□□ 1.33
AL359258.1-201ENST00000438965 CUL7Q14999 1698 aa23.31■■□□□ 1.32
AL359258.1-201ENST00000438965 WDR97A6NE52 1622 aa23.29■■□□□ 1.32
AL359258.1-201ENST00000438965 P3H3Q8IVL6 736 aa23.29■■□□□ 1.32
AL359258.1-201ENST00000438965 GAPVD1Q14C86 1478 aa23.28■■□□□ 1.32
AL359258.1-201ENST00000438965 ABCA5Q8WWZ7 1642 aa23.24■■□□□ 1.31
AL359258.1-201ENST00000438965 FHAD1B1AJZ9 1412 aa23.22■■□□□ 1.31
AL359258.1-201ENST00000438965 FHOD3Q2V2M9 1422 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms