RNA–Protein interactions for RNA: ENST00000421365.2

IFIH1-202, Transcript of interferon induced with helicase C domain 1, humanhuman

TSL 1 (best) BASIC

Gene IFIH1, Length 1,617 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFIH1-202ENST00000421365 NISCHQ9Y2I1 1504 aa42.89■■■■■ 4.46
IFIH1-202ENST00000421365 CCDC180Q9P1Z9 1646 aa37.85■■■■□ 3.65
IFIH1-202ENST00000421365 ABCC9O60706 1549 aa36.66■■■■□ 3.46
IFIH1-202ENST00000421365 ZCCHC6Q5VYS8 1495 aaKnown RBP35.84■■■■□ 3.33
IFIH1-202ENST00000421365 DCAF8L2P0C7V8 631 aa35.7■■■■□ 3.31
IFIH1-202ENST00000421365 NACADO15069 1562 aa35.47■■■■□ 3.27
IFIH1-202ENST00000421365 DCAF1Q9Y4B6 1507 aa35.46■■■■□ 3.27
IFIH1-202ENST00000421365 RB1CC1Q8TDY2 1594 aa35.4■■■■□ 3.26
IFIH1-202ENST00000421365 MYO15BQ96JP2 1530 aa35.4■■■■□ 3.26
IFIH1-202ENST00000421365 SCRIBQ14160 1630 aa34.67■■■■□ 3.14
IFIH1-202ENST00000421365 UNC13AQ9UPW8 1703 aa34.65■■■■□ 3.14
IFIH1-202ENST00000421365 BICRAQ9NZM4 1560 aa34.37■■■■□ 3.09
IFIH1-202ENST00000421365 PABPN1Q86U42 306 aaKnown RBP eCLIP34.37■■■■□ 3.09
IFIH1-202ENST00000421365 SHROOM4Q9ULL8 1493 aa34.29■■■■□ 3.08
IFIH1-202ENST00000421365 EIF4G1Q04637 1599 aaKnown RBP33.41■■■□□ 2.94
IFIH1-202ENST00000421365 CECR2Q9BXF3 1484 aa33.41■■■□□ 2.94
IFIH1-202ENST00000421365 DNAJC5BQ9UF47 199 aa33.22■■■□□ 2.91
IFIH1-202ENST00000421365 BAZ1AQ9NRL2 1556 aaPredicted RBP33.19■■■□□ 2.9
IFIH1-202ENST00000421365 SMARCA4P51532 1647 aa33.18■■■□□ 2.9
IFIH1-202ENST00000421365 CC2D2AQ9P2K1 1620 aa33.15■■■□□ 2.9
IFIH1-202ENST00000421365 MROH2BQ7Z745 1585 aa33.1■■■□□ 2.89
IFIH1-202ENST00000421365 RSF1Q96T23 1441 aaPredicted RBP32.9■■■□□ 2.86
IFIH1-202ENST00000421365 ATAD2BQ9ULI0 1458 aa32.87■■■□□ 2.85
IFIH1-202ENST00000421365 SMARCA2P51531 1590 aa32.82■■■□□ 2.84
IFIH1-202ENST00000421365 PEG3Q9GZU2 1588 aa32.81■■■□□ 2.84
IFIH1-202ENST00000421365 WIZO95785 1651 aa32.77■■■□□ 2.84
IFIH1-202ENST00000421365 NCAPD3P42695 1498 aa32.75■■■□□ 2.83
IFIH1-202ENST00000421365 HMGXB3Q12766 1538 aa32.63■■■□□ 2.81
IFIH1-202ENST00000421365 BAZ1BQ9UIG0 1483 aaKnown RBP32.62■■■□□ 2.81
IFIH1-202ENST00000421365 SUPT5HO00267 1087 aaKnown RBP32.49■■■□□ 2.79
IFIH1-202ENST00000421365 TOP2AP11388 1531 aaKnown RBP32.41■■■□□ 2.78
IFIH1-202ENST00000421365 CCDC88BA6NC98 1476 aa32.06■■■□□ 2.72
IFIH1-202ENST00000421365 NESP48681 1621 aa31.88■■■□□ 2.69
IFIH1-202ENST00000421365 CADPSQ9ULU8 1353 aa31.85■■■□□ 2.69
IFIH1-202ENST00000421365 LAMC3Q9Y6N6 1575 aa31.79■■■□□ 2.68
IFIH1-202ENST00000421365 CFTRP13569 1480 aa31.75■■■□□ 2.67
IFIH1-202ENST00000421365 PDS5BQ9NTI5 1447 aa31.57■■■□□ 2.64
IFIH1-202ENST00000421365 PRDM2Q13029 1718 aa31.52■■■□□ 2.64
IFIH1-202ENST00000421365 ERCC6Q03468 1493 aa31.52■■■□□ 2.64
IFIH1-202ENST00000421365 KIF21AQ7Z4S6 1674 aa31.49■■■□□ 2.63
IFIH1-202ENST00000421365 FANCD2Q9BXW9 1451 aa31.48■■■□□ 2.63
IFIH1-202ENST00000421365 CEP164Q9UPV0 1460 aa31.39■■■□□ 2.62
IFIH1-202ENST00000421365 THOC2Q8NI27 1593 aaKnown RBP31.24■■■□□ 2.59
IFIH1-202ENST00000421365 MRC2Q9UBG0 1479 aa31.23■■■□□ 2.59
IFIH1-202ENST00000421365 URB2Q14146 1524 aaKnown RBP31.15■■■□□ 2.58
IFIH1-202ENST00000421365 WDR62O43379 1518 aa31.11■■■□□ 2.57
IFIH1-202ENST00000421365 ABCC8Q09428 1581 aa31.08■■■□□ 2.57
IFIH1-202ENST00000421365 TOPBP1Q92547 1522 aa31.04■■■□□ 2.56
IFIH1-202ENST00000421365 DNMBPQ6XZF7 1577 aa31.03■■■□□ 2.56
IFIH1-202ENST00000421365 CUX1P39880 1505 aa31.02■■■□□ 2.56
IFIH1-202ENST00000421365 WRNQ14191 1432 aaPredicted RBP eCLIP30.99■■■□□ 2.55
IFIH1-202ENST00000421365 CUX2O14529 1486 aa30.95■■■□□ 2.55
IFIH1-202ENST00000421365 SYNJ1O43426 1573 aa30.91■■■□□ 2.54
IFIH1-202ENST00000421365 TOP2BQ02880 1626 aa30.85■■■□□ 2.53
IFIH1-202ENST00000421365 BIVM-ERCC5R4GMW8 1640 aa30.84■■■□□ 2.53
IFIH1-202ENST00000421365 POLA1P09884 1462 aaPredicted RBP30.83■■■□□ 2.53
IFIH1-202ENST00000421365 FGD5Q6ZNL6 1462 aa30.83■■■□□ 2.53
IFIH1-202ENST00000421365 RAD54L2Q9Y4B4 1467 aa30.72■■■□□ 2.51
IFIH1-202ENST00000421365 SOGA1O94964 1423 aa30.69■■■□□ 2.5
IFIH1-202ENST00000421365 IFT140Q96RY7 1462 aa30.69■■■□□ 2.5
IFIH1-202ENST00000421365 TARBP1Q13395 1621 aaKnown RBP30.66■■■□□ 2.5
IFIH1-202ENST00000421365 TRIM41Q8WV44 630 aa30.62■■■□□ 2.49
IFIH1-202ENST00000421365 CHIC1Q5VXU3 224 aa30.61■■■□□ 2.49
IFIH1-202ENST00000421365 ZNF608Q9ULD9 1512 aaPredicted RBP30.58■■■□□ 2.49
IFIH1-202ENST00000421365 ABCA10Q8WWZ4 1543 aa30.52■■■□□ 2.48
IFIH1-202ENST00000421365 WDR97A6NE52 1622 aa30.52■■■□□ 2.48
IFIH1-202ENST00000421365 TDRD9Q8NDG6 1382 aaKnown RBP30.49■■■□□ 2.47
IFIH1-202ENST00000421365 AQRO60306 1485 aaKnown RBP eCLIP30.47■■■□□ 2.47
IFIH1-202ENST00000421365 EIF4G3O43432 1585 aaKnown RBP30.45■■■□□ 2.47
IFIH1-202ENST00000421365 ABCA5Q8WWZ7 1642 aa30.36■■■□□ 2.45
IFIH1-202ENST00000421365 GAPVD1Q14C86 1478 aa30.34■■■□□ 2.45
IFIH1-202ENST00000421365 KIF27Q86VH2 1401 aa30.29■■■□□ 2.44
IFIH1-202ENST00000421365 GRIN2BQ13224 1484 aa30.26■■■□□ 2.43
IFIH1-202ENST00000421365 RUSC2Q8N2Y8 1516 aa30.25■■■□□ 2.43
IFIH1-202ENST00000421365 PBRM1Q86U86 1689 aa30.24■■■□□ 2.43
IFIH1-202ENST00000421365 SNAPC4Q5SXM2 1469 aa30.18■■■□□ 2.42
IFIH1-202ENST00000421365 ERICH3Q5RHP9 1530 aa30.15■■■□□ 2.42
IFIH1-202ENST00000421365 IGF1RP08069 1367 aa30.12■■■□□ 2.41
IFIH1-202ENST00000421365 MAGI1Q96QZ7 1491 aaPredicted RBP30.11■■■□□ 2.41
IFIH1-202ENST00000421365 ADAMTS12P58397 1594 aa30.04■■■□□ 2.4
IFIH1-202ENST00000421365 FAM9AQ8IZU1 332 aaPredicted RBP30.04■■■□□ 2.4
IFIH1-202ENST00000421365 SYNJ2O15056 1496 aa30■■■□□ 2.39
IFIH1-202ENST00000421365 EEA1Q15075 1411 aa30■■■□□ 2.39
IFIH1-202ENST00000421365 FBLN2P98095 1184 aa30■■■□□ 2.39
IFIH1-202ENST00000421365 FHAD1B1AJZ9 1412 aa30■■■□□ 2.39
IFIH1-202ENST00000421365 CHD1O14646 1710 aa29.97■■■□□ 2.39
IFIH1-202ENST00000421365 CHMP7Q8WUX9 453 aaPredicted RBP29.96■■■□□ 2.39
IFIH1-202ENST00000421365 CUL7Q14999 1698 aa29.96■■■□□ 2.39
IFIH1-202ENST00000421365 CSRNP3Q8WYN3 585 aa29.95■■■□□ 2.38
IFIH1-202ENST00000421365 CARMIL1Q5VZK9 1371 aa29.95■■■□□ 2.38
IFIH1-202ENST00000421365 GRIN2AQ12879 1464 aa29.88■■■□□ 2.37
IFIH1-202ENST00000421365 PRXQ9BXM0 1461 aa29.85■■■□□ 2.37
IFIH1-202ENST00000421365 RAPGEF2Q9Y4G8 1499 aa29.81■■■□□ 2.36
IFIH1-202ENST00000421365 OSCARQ8IYS5 282 aa29.79■■■□□ 2.36
IFIH1-202ENST00000421365 CEP170Q5SW79 1584 aa29.73■■■□□ 2.35
IFIH1-202ENST00000421365 NUP160Q12769 1436 aa29.72■■■□□ 2.35
IFIH1-202ENST00000421365 KIF21BO75037 1637 aa29.69■■■□□ 2.34
IFIH1-202ENST00000421365 EHMT2Q96KQ7 1210 aa29.66■■■□□ 2.34
IFIH1-202ENST00000421365 CLASP1Q7Z460 1538 aa29.64■■■□□ 2.34
IFIH1-202ENST00000421365 GOLGA3Q08378 1498 aa29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms