RNA–Protein interactions for RNA: ENST00000266671.9

PHLDA1-201, Transcript of pleckstrin homology like domain family A member 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PHLDA1, Length 8,069 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDA1-201ENST00000266671 DCAF8L2P0C7V8 631 aa25.58■■□□□ 1.69
PHLDA1-201ENST00000266671 SUPT5HO00267 1087 aaKnown RBP23.91■■□□□ 1.42
PHLDA1-201ENST00000266671 PELP1Q8IZL8 1130 aaKnown RBP23.63■■□□□ 1.37
PHLDA1-201ENST00000266671 EHMT2Q96KQ7 1210 aa23.57■■□□□ 1.36
PHLDA1-201ENST00000266671 SHROOM4Q9ULL8 1493 aa23.42■■□□□ 1.34
PHLDA1-201ENST00000266671 APLP2Q06481 763 aa23.34■■□□□ 1.33
PHLDA1-201ENST00000266671 FAM9AQ8IZU1 332 aaPredicted RBP23.28■■□□□ 1.32
PHLDA1-201ENST00000266671 NISCHQ9Y2I1 1504 aa23.21■■□□□ 1.31
PHLDA1-201ENST00000266671 TTBK1Q5TCY1 1321 aaPredicted RBP22.78■■□□□ 1.24
PHLDA1-201ENST00000266671 ERICH6Q7L0X2 663 aa22.69■■□□□ 1.22
PHLDA1-201ENST00000266671 ATP1B4Q9UN42 357 aaPredicted RBP22.61■■□□□ 1.21
PHLDA1-201ENST00000266671 CCER1Q8TC90 406 aaPredicted RBP22.59■■□□□ 1.21
PHLDA1-201ENST00000266671 RANGAP1P46060 587 aaPredicted RBP22.59■■□□□ 1.21
PHLDA1-201ENST00000266671 PCGF6Q9BYE7 350 aa22.5■■□□□ 1.19
PHLDA1-201ENST00000266671 CENPBP07199 599 aaPredicted RBP22.35■■□□□ 1.17
PHLDA1-201ENST00000266671 UBTFP17480 764 aaKnown RBP22.17■■□□□ 1.14
PHLDA1-201ENST00000266671 TRIM41Q8WV44 630 aa22.16■■□□□ 1.14
PHLDA1-201ENST00000266671 NEFLP07196 543 aa22.16■■□□□ 1.14
PHLDA1-201ENST00000266671 ZEB1P37275 1124 aaPredicted RBP22.15■■□□□ 1.14
PHLDA1-201ENST00000266671 MYT1LQ9UL68 1186 aa21.97■■□□□ 1.11
PHLDA1-201ENST00000266671 YTHDC1Q96MU7 727 aaKnown RBP21.86■■□□□ 1.09
PHLDA1-201ENST00000266671 DAXXQ9UER7 740 aaPredicted RBP21.81■■□□□ 1.08
PHLDA1-201ENST00000266671 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.73■■□□□ 1.07
PHLDA1-201ENST00000266671 HNRNPUL2Q1KMD3 747 aaKnown RBP21.73■■□□□ 1.07
PHLDA1-201ENST00000266671 POLR3GLQ9BT43 218 aa21.71■■□□□ 1.07
PHLDA1-201ENST00000266671 CHIC1Q5VXU3 224 aa21.62■■□□□ 1.05
PHLDA1-201ENST00000266671 PPARGC1BQ86YN6 1023 aaKnown RBP21.61■■□□□ 1.05
PHLDA1-201ENST00000266671 ITGAEP38570 1179 aa21.56■■□□□ 1.04
PHLDA1-201ENST00000266671 SLC4A1APQ9BWU0 796 aaKnown RBP21.55■■□□□ 1.04
PHLDA1-201ENST00000266671 MYT1Q01538 1121 aa21.53■■□□□ 1.04
PHLDA1-201ENST00000266671 CNGB1Q14028 1251 aaPredicted RBP21.45■■□□□ 1.02
PHLDA1-201ENST00000266671 TRIM26Q12899 539 aaPredicted RBP21.3■■□□□ 1
PHLDA1-201ENST00000266671 CLSPNQ9HAW4 1339 aa21.25■□□□□ 0.99
PHLDA1-201ENST00000266671 ZNF316A6NFI3 1004 aaPredicted RBP21.23■□□□□ 0.99
PHLDA1-201ENST00000266671 RTL5Q5HYW3 569 aaPredicted RBP21.03■□□□□ 0.96
PHLDA1-201ENST00000266671 HRCP23327 699 aa20.98■□□□□ 0.95
PHLDA1-201ENST00000266671 FAM50AQ14320 339 aaKnown RBP20.98■□□□□ 0.95
PHLDA1-201ENST00000266671 ZBTB47Q9UFB7 747 aaPredicted RBP20.95■□□□□ 0.94
PHLDA1-201ENST00000266671 SLC24A1O60721 1099 aa20.94■□□□□ 0.94
PHLDA1-201ENST00000266671 TRIM52Q96A61 297 aa20.92■□□□□ 0.94
PHLDA1-201ENST00000266671 LOC105371045A0A1W2PR82 267 aa20.87■□□□□ 0.93
PHLDA1-201ENST00000266671 BCANQ96GW7 911 aa20.8■□□□□ 0.92
PHLDA1-201ENST00000266671 NEUROD1Q13562 356 aa20.76■□□□□ 0.91
PHLDA1-201ENST00000266671 BCL11AQ9H165 835 aa20.74■□□□□ 0.91
PHLDA1-201ENST00000266671 DIEXFQ68CQ4 756 aaKnown RBP20.74■□□□□ 0.91
PHLDA1-201ENST00000266671 ZNF326Q5BKZ1 582 aaKnown RBP20.72■□□□□ 0.91
PHLDA1-201ENST00000266671 FBLN2P98095 1184 aa20.71■□□□□ 0.91
PHLDA1-201ENST00000266671 NEFMP07197 916 aa20.7■□□□□ 0.9
PHLDA1-201ENST00000266671 CANXP27824 592 aaKnown RBP20.67■□□□□ 0.9
PHLDA1-201ENST00000266671 ANP32CO43423 234 aa20.61■□□□□ 0.89
PHLDA1-201ENST00000266671 CDK11AQ9UQ88 783 aaPredicted RBP20.53■□□□□ 0.88
PHLDA1-201ENST00000266671 PABPN1Q86U42 306 aaKnown RBP eCLIP20.53■□□□□ 0.88
PHLDA1-201ENST00000266671 ABCC9O60706 1549 aa20.49■□□□□ 0.87
PHLDA1-201ENST00000266671 ESF1Q9H501 851 aaKnown RBP20.45■□□□□ 0.86
PHLDA1-201ENST00000266671 STAG3Q9UJ98 1225 aa20.32■□□□□ 0.84
PHLDA1-201ENST00000266671 PLPPR3Q6T4P5 718 aa20.32■□□□□ 0.84
PHLDA1-201ENST00000266671 ARID3CA6NKF2 412 aa20.31■□□□□ 0.84
PHLDA1-201ENST00000266671 ZNF777Q9ULD5 760 aaPredicted RBP20.28■□□□□ 0.84
PHLDA1-201ENST00000266671 ANP32AP39687 249 aaKnown RBP20.26■□□□□ 0.83
PHLDA1-201ENST00000266671 HSP90AA1P07900 732 aaKnown RBP20.26■□□□□ 0.83
PHLDA1-201ENST00000266671 P3H3Q8IVL6 736 aa20.25■□□□□ 0.83
PHLDA1-201ENST00000266671 ANP32BQ92688 251 aaKnown RBP20.24■□□□□ 0.83
PHLDA1-201ENST00000266671 CHGAP10645 457 aaKnown RBP20.19■□□□□ 0.82
PHLDA1-201ENST00000266671 GTF3C3Q9Y5Q9 886 aa20.18■□□□□ 0.82
PHLDA1-201ENST00000266671 NPM2Q86SE8 214 aaKnown RBP20.15■□□□□ 0.82
PHLDA1-201ENST00000266671 UPF2Q9HAU5 1272 aaKnown RBP20.12■□□□□ 0.81
PHLDA1-201ENST00000266671 NPM1P06748 294 aaKnown RBP eCLIP20.1■□□□□ 0.81
PHLDA1-201ENST00000266671 SCAF1Q9H7N4 1312 aaKnown RBP20.06■□□□□ 0.8
PHLDA1-201ENST00000266671 A0A0G2JS52 829 aa19.99■□□□□ 0.79
PHLDA1-201ENST00000266671 TONSLQ96HA7 1378 aa19.98■□□□□ 0.79
PHLDA1-201ENST00000266671 CDK11BP21127 795 aaKnown RBP19.92■□□□□ 0.78
PHLDA1-201ENST00000266671 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.91■□□□□ 0.781e-6■□□□□ 8.9
PHLDA1-201ENST00000266671 SALL2Q9Y467 1007 aaPredicted RBP19.91■□□□□ 0.78
PHLDA1-201ENST00000266671 SCRIBQ14160 1630 aa19.91■□□□□ 0.78
PHLDA1-201ENST00000266671 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.88■□□□□ 0.77
PHLDA1-201ENST00000266671 EIF5BO60841 1220 aaKnown RBP19.87■□□□□ 0.77
PHLDA1-201ENST00000266671 FAM9BQ8IZU0 186 aa19.86■□□□□ 0.77
PHLDA1-201ENST00000266671 TMC1Q8TDI8 760 aa19.85■□□□□ 0.77
PHLDA1-201ENST00000266671 WDR43Q15061 677 aaKnown RBP eCLIP19.84■□□□□ 0.77
PHLDA1-201ENST00000266671 HNRNPUQ00839 825 aaKnown RBP eCLIP19.84■□□□□ 0.77
PHLDA1-201ENST00000266671 CSRNP3Q8WYN3 585 aa19.82■□□□□ 0.76
PHLDA1-201ENST00000266671 MYH16Q9H6N6 1097 aa19.81■□□□□ 0.76
PHLDA1-201ENST00000266671 FKBP8Q14318 412 aa19.8■□□□□ 0.76
PHLDA1-201ENST00000266671 PLEKHG5O94827 1062 aa19.77■□□□□ 0.76
PHLDA1-201ENST00000266671 C14orf37Q86TY3 774 aa19.77■□□□□ 0.75
PHLDA1-201ENST00000266671 ZBTB7CA1YPR0 619 aa19.76■□□□□ 0.75
PHLDA1-201ENST00000266671 KDM2AQ9Y2K7 1162 aa19.74■□□□□ 0.75
PHLDA1-201ENST00000266671 ARXQ96QS3 562 aa19.74■□□□□ 0.75
PHLDA1-201ENST00000266671 CCDC136Q96JN2 1154 aa19.72■□□□□ 0.75
PHLDA1-201ENST00000266671 DDX10Q13206 875 aaKnown RBP19.71■□□□□ 0.75
PHLDA1-201ENST00000266671 CHIC2Q9UKJ5 165 aa19.7■□□□□ 0.74
PHLDA1-201ENST00000266671 TSPY4P0CV99 314 aa19.7■□□□□ 0.74
PHLDA1-201ENST00000266671 TSPY10P0CW01 314 aa19.7■□□□□ 0.74
PHLDA1-201ENST00000266671 GLIPR1L2Q4G1C9 344 aa19.69■□□□□ 0.74
PHLDA1-201ENST00000266671 ACIN1Q9UKV3 1341 aaKnown RBP19.68■□□□□ 0.74
PHLDA1-201ENST00000266671 HAP1P54257 671 aaPredicted RBP19.66■□□□□ 0.74
PHLDA1-201ENST00000266671 SENP3Q9H4L4 574 aaPredicted RBP19.65■□□□□ 0.74
PHLDA1-201ENST00000266671 PPP1R15AO75807 674 aaPredicted RBP19.64■□□□□ 0.74
PHLDA1-201ENST00000266671 NBR1Q14596 966 aa19.63■□□□□ 0.73
PHLDA1-201ENST00000266671 CHMP7Q8WUX9 453 aaPredicted RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms