RNA–Protein interactions for RNA: ENST00000216083.6

CBX6-201, Transcript of chromobox 6, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CBX6, Length 3,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-201ENST00000216083 NISCHQ9Y2I1 1504 aa32.59■■■□□ 2.81
CBX6-201ENST00000216083 CCDC180Q9P1Z9 1646 aa28.17■■■□□ 2.1
CBX6-201ENST00000216083 ZCCHC6Q5VYS8 1495 aaKnown RBP27.36■■□□□ 1.97
CBX6-201ENST00000216083 DCAF8L2P0C7V8 631 aa27.34■■□□□ 1.97
CBX6-201ENST00000216083 SHROOM4Q9ULL8 1493 aa27.08■■□□□ 1.93
CBX6-201ENST00000216083 ABCC9O60706 1549 aa26.99■■□□□ 1.91
CBX6-201ENST00000216083 DCAF1Q9Y4B6 1507 aa26.73■■□□□ 1.87
CBX6-201ENST00000216083 MYO15BQ96JP2 1530 aa26.33■■□□□ 1.81
CBX6-201ENST00000216083 NACADO15069 1562 aa26.29■■□□□ 1.8
CBX6-201ENST00000216083 SCRIBQ14160 1630 aa26.26■■□□□ 1.79
CBX6-201ENST00000216083 RB1CC1Q8TDY2 1594 aa26.09■■□□□ 1.77
CBX6-201ENST00000216083 SUPT5HO00267 1087 aaKnown RBP26.07■■□□□ 1.76
CBX6-201ENST00000216083 UNC13AQ9UPW8 1703 aa25.66■■□□□ 1.7
CBX6-201ENST00000216083 PABPN1Q86U42 306 aaKnown RBP eCLIP25.6■■□□□ 1.69
CBX6-201ENST00000216083 CECR2Q9BXF3 1484 aa25.5■■□□□ 1.67
CBX6-201ENST00000216083 BICRAQ9NZM4 1560 aa25.41■■□□□ 1.66
CBX6-201ENST00000216083 RSF1Q96T23 1441 aaPredicted RBP25.4■■□□□ 1.66
CBX6-201ENST00000216083 MROH2BQ7Z745 1585 aa25.3■■□□□ 1.64
CBX6-201ENST00000216083 WIZO95785 1651 aa25.11■■□□□ 1.61
CBX6-201ENST00000216083 BAZ1AQ9NRL2 1556 aaPredicted RBP25.1■■□□□ 1.61
CBX6-201ENST00000216083 SMARCA4P51532 1647 aa25.03■■□□□ 1.6
CBX6-201ENST00000216083 CHIC1Q5VXU3 224 aa24.84■■□□□ 1.57
CBX6-201ENST00000216083 TOP2AP11388 1531 aaKnown RBP24.69■■□□□ 1.54
CBX6-201ENST00000216083 ATAD2BQ9ULI0 1458 aa24.64■■□□□ 1.53
CBX6-201ENST00000216083 EIF4G1Q04637 1599 aaKnown RBP24.63■■□□□ 1.53
CBX6-201ENST00000216083 PEG3Q9GZU2 1588 aa24.58■■□□□ 1.53
CBX6-201ENST00000216083 CCDC88BA6NC98 1476 aa24.57■■□□□ 1.52
CBX6-201ENST00000216083 SMARCA2P51531 1590 aa24.53■■□□□ 1.52
CBX6-201ENST00000216083 BAZ1BQ9UIG0 1483 aaKnown RBP24.51■■□□□ 1.51
CBX6-201ENST00000216083 TRIM41Q8WV44 630 aa24.35■■□□□ 1.49
CBX6-201ENST00000216083 NCAPD3P42695 1498 aa24.33■■□□□ 1.49
CBX6-201ENST00000216083 CC2D2AQ9P2K1 1620 aa24.28■■□□□ 1.48
CBX6-201ENST00000216083 HMGXB3Q12766 1538 aa24.24■■□□□ 1.47
CBX6-201ENST00000216083 ABCC8Q09428 1581 aa24.19■■□□□ 1.46
CBX6-201ENST00000216083 FAM9AQ8IZU1 332 aaPredicted RBP24.14■■□□□ 1.46
CBX6-201ENST00000216083 LOC105371045A0A1W2PR82 267 aa24.09■■□□□ 1.45
CBX6-201ENST00000216083 DNAJC5BQ9UF47 199 aa24.01■■□□□ 1.43
CBX6-201ENST00000216083 EHMT2Q96KQ7 1210 aa23.98■■□□□ 1.43
CBX6-201ENST00000216083 WRNQ14191 1432 aaPredicted RBP eCLIP23.9■■□□□ 1.42
CBX6-201ENST00000216083 CFTRP13569 1480 aa23.85■■□□□ 1.41
CBX6-201ENST00000216083 SYNJ1O43426 1573 aa23.82■■□□□ 1.4
CBX6-201ENST00000216083 CADPSQ9ULU8 1353 aa23.79■■□□□ 1.4
CBX6-201ENST00000216083 SOGA1O94964 1423 aa23.76■■□□□ 1.39
CBX6-201ENST00000216083 NESP48681 1621 aa23.74■■□□□ 1.39
CBX6-201ENST00000216083 RUSC2Q8N2Y8 1516 aa23.71■■□□□ 1.39
CBX6-201ENST00000216083 CUX1P39880 1505 aa23.62■■□□□ 1.37
CBX6-201ENST00000216083 TOP2BQ02880 1626 aa23.59■■□□□ 1.37
CBX6-201ENST00000216083 PRDM2Q13029 1718 aa23.58■■□□□ 1.37
CBX6-201ENST00000216083 FANCD2Q9BXW9 1451 aa23.56■■□□□ 1.36
CBX6-201ENST00000216083 BIVM-ERCC5R4GMW8 1640 aa23.52■■□□□ 1.36
CBX6-201ENST00000216083 CSRNP3Q8WYN3 585 aa23.52■■□□□ 1.36
CBX6-201ENST00000216083 HRCP23327 699 aa23.52■■□□□ 1.36
CBX6-201ENST00000216083 PPARGC1BQ86YN6 1023 aaKnown RBP23.51■■□□□ 1.35
CBX6-201ENST00000216083 LAMC3Q9Y6N6 1575 aa23.45■■□□□ 1.34
CBX6-201ENST00000216083 EEA1Q15075 1411 aa23.41■■□□□ 1.34
CBX6-201ENST00000216083 CEP164Q9UPV0 1460 aa23.36■■□□□ 1.33
CBX6-201ENST00000216083 FGD5Q6ZNL6 1462 aa23.36■■□□□ 1.33
CBX6-201ENST00000216083 UBTFP17480 764 aaKnown RBP23.35■■□□□ 1.33
CBX6-201ENST00000216083 PDS5BQ9NTI5 1447 aa23.34■■□□□ 1.33
CBX6-201ENST00000216083 PCGF6Q9BYE7 350 aa23.33■■□□□ 1.32
CBX6-201ENST00000216083 KIF21AQ7Z4S6 1674 aa23.31■■□□□ 1.32
CBX6-201ENST00000216083 TOPBP1Q92547 1522 aa23.3■■□□□ 1.32
CBX6-201ENST00000216083 URB2Q14146 1524 aaKnown RBP23.28■■□□□ 1.32
CBX6-201ENST00000216083 DNMBPQ6XZF7 1577 aa23.27■■□□□ 1.32
CBX6-201ENST00000216083 RAD54L2Q9Y4B4 1467 aa23.26■■□□□ 1.31
CBX6-201ENST00000216083 CUX2O14529 1486 aa23.25■■□□□ 1.31
CBX6-201ENST00000216083 KIF27Q86VH2 1401 aa23.24■■□□□ 1.31
CBX6-201ENST00000216083 GOLGA3Q08378 1498 aa23.23■■□□□ 1.31
CBX6-201ENST00000216083 RAPGEF2Q9Y4G8 1499 aa23.23■■□□□ 1.31
CBX6-201ENST00000216083 POLA1P09884 1462 aaPredicted RBP23.22■■□□□ 1.31
CBX6-201ENST00000216083 RANGAP1P46060 587 aaPredicted RBP23.2■■□□□ 1.3
CBX6-201ENST00000216083 TNIKQ9UKE5 1360 aa23.17■■□□□ 1.3
CBX6-201ENST00000216083 KIF21BO75037 1637 aa23.16■■□□□ 1.3
CBX6-201ENST00000216083 CEP162Q5TB80 1403 aa23.15■■□□□ 1.3
CBX6-201ENST00000216083 IGF1RP08069 1367 aa23.09■■□□□ 1.29
CBX6-201ENST00000216083 PRXQ9BXM0 1461 aa23.09■■□□□ 1.29
CBX6-201ENST00000216083 TDRD9Q8NDG6 1382 aaKnown RBP23.06■■□□□ 1.28
CBX6-201ENST00000216083 ERCC6Q03468 1493 aa23.05■■□□□ 1.28
CBX6-201ENST00000216083 ABCA10Q8WWZ4 1543 aa23.04■■□□□ 1.28
CBX6-201ENST00000216083 MRC2Q9UBG0 1479 aa23.04■■□□□ 1.28
CBX6-201ENST00000216083 CARMIL1Q5VZK9 1371 aa22.98■■□□□ 1.27
CBX6-201ENST00000216083 ERICH3Q5RHP9 1530 aa22.96■■□□□ 1.27
CBX6-201ENST00000216083 CLIP1P30622 1438 aa22.95■■□□□ 1.26
CBX6-201ENST00000216083 TTBK1Q5TCY1 1321 aaPredicted RBP22.93■■□□□ 1.26
CBX6-201ENST00000216083 WDR97A6NE52 1622 aa22.92■■□□□ 1.26
CBX6-201ENST00000216083 TARBP1Q13395 1621 aaKnown RBP22.89■■□□□ 1.26
CBX6-201ENST00000216083 GAPVD1Q14C86 1478 aa22.88■■□□□ 1.25
CBX6-201ENST00000216083 WDR62O43379 1518 aa22.87■■□□□ 1.25
CBX6-201ENST00000216083 AQRO60306 1485 aaKnown RBP eCLIP22.87■■□□□ 1.252e-6■■■■□ 22.4
CBX6-201ENST00000216083 ABCA5Q8WWZ7 1642 aa22.84■■□□□ 1.25
CBX6-201ENST00000216083 ZNF608Q9ULD9 1512 aaPredicted RBP22.82■■□□□ 1.24
CBX6-201ENST00000216083 THOC2Q8NI27 1593 aaKnown RBP22.82■■□□□ 1.24
CBX6-201ENST00000216083 TRIM26Q12899 539 aaPredicted RBP22.8■■□□□ 1.24
CBX6-201ENST00000216083 IFT140Q96RY7 1462 aa22.74■■□□□ 1.23
CBX6-201ENST00000216083 CUL7Q14999 1698 aa22.72■■□□□ 1.23
CBX6-201ENST00000216083 P3H3Q8IVL6 736 aa22.7■■□□□ 1.22
CBX6-201ENST00000216083 ARAP1Q96P48 1450 aa22.7■■□□□ 1.22
CBX6-201ENST00000216083 VPS8Q8N3P4 1428 aa22.69■■□□□ 1.22
CBX6-201ENST00000216083 ARHGAP35Q9NRY4 1499 aa22.68■■□□□ 1.22
CBX6-201ENST00000216083 PBRM1Q86U86 1689 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms