RNA–Protein interactions for RNA: ENST00000450894.7

ITGB4-203, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,645 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-203ENST00000450894 DCAF8L2P0C7V8 631 aa22.97■■□□□ 1.27
ITGB4-203ENST00000450894 PELP1Q8IZL8 1130 aaKnown RBP22.78■■□□□ 1.24
ITGB4-203ENST00000450894 NISCHQ9Y2I1 1504 aa22.7■■□□□ 1.22
ITGB4-203ENST00000450894 SUPT5HO00267 1087 aaKnown RBP22.36■■□□□ 1.17
ITGB4-203ENST00000450894 MYT1Q01538 1121 aa22.34■■□□□ 1.17
ITGB4-203ENST00000450894 ZEB1P37275 1124 aaPredicted RBP21.95■■□□□ 1.1
ITGB4-203ENST00000450894 SHROOM4Q9ULL8 1493 aa21.88■■□□□ 1.09
ITGB4-203ENST00000450894 CENPBP07199 599 aaPredicted RBP21.85■■□□□ 1.09
ITGB4-203ENST00000450894 ERICH6Q7L0X2 663 aa21.82■■□□□ 1.08
ITGB4-203ENST00000450894 CCER1Q8TC90 406 aaPredicted RBP21.69■■□□□ 1.06
ITGB4-203ENST00000450894 PCGF6Q9BYE7 350 aa21.68■■□□□ 1.06
ITGB4-203ENST00000450894 EHMT2Q96KQ7 1210 aa21.63■■□□□ 1.05
ITGB4-203ENST00000450894 APLP2Q06481 763 aa21.48■■□□□ 1.03
ITGB4-203ENST00000450894 HRCP23327 699 aa21.27■■□□□ 1
ITGB4-203ENST00000450894 NEFLP07196 543 aa21.17■□□□□ 0.98
ITGB4-203ENST00000450894 TTBK1Q5TCY1 1321 aaPredicted RBP21.06■□□□□ 0.96
ITGB4-203ENST00000450894 FAM9AQ8IZU1 332 aaPredicted RBP21.04■□□□□ 0.96
ITGB4-203ENST00000450894 TRIM26Q12899 539 aaPredicted RBP21.03■□□□□ 0.96
ITGB4-203ENST00000450894 YTHDC1Q96MU7 727 aaKnown RBP21.03■□□□□ 0.96
ITGB4-203ENST00000450894 TRIM41Q8WV44 630 aa20.9■□□□□ 0.94
ITGB4-203ENST00000450894 DAXXQ9UER7 740 aaPredicted RBP20.61■□□□□ 0.89
ITGB4-203ENST00000450894 RANGAP1P46060 587 aaPredicted RBP20.53■□□□□ 0.88
ITGB4-203ENST00000450894 UBTFP17480 764 aaKnown RBP20.46■□□□□ 0.87
ITGB4-203ENST00000450894 CHIC1Q5VXU3 224 aa20.42■□□□□ 0.86
ITGB4-203ENST00000450894 RTL5Q5HYW3 569 aaPredicted RBP20.41■□□□□ 0.86
ITGB4-203ENST00000450894 PPARGC1BQ86YN6 1023 aaKnown RBP20.34■□□□□ 0.85
ITGB4-203ENST00000450894 DIEXFQ68CQ4 756 aaKnown RBP20.33■□□□□ 0.85
ITGB4-203ENST00000450894 ATP1B4Q9UN42 357 aaPredicted RBP20.32■□□□□ 0.84
ITGB4-203ENST00000450894 ZNF316A6NFI3 1004 aaPredicted RBP20.15■□□□□ 0.82
ITGB4-203ENST00000450894 GTF3C3Q9Y5Q9 886 aa20.15■□□□□ 0.82
ITGB4-203ENST00000450894 LOC105371045A0A1W2PR82 267 aa20.13■□□□□ 0.81
ITGB4-203ENST00000450894 CLSPNQ9HAW4 1339 aa20.1■□□□□ 0.81
ITGB4-203ENST00000450894 ACIN1Q9UKV3 1341 aaKnown RBP20.07■□□□□ 0.8
ITGB4-203ENST00000450894 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.96■□□□□ 0.79
ITGB4-203ENST00000450894 POLR3GLQ9BT43 218 aa19.93■□□□□ 0.78
ITGB4-203ENST00000450894 HNRNPUL2Q1KMD3 747 aaKnown RBP19.89■□□□□ 0.78
ITGB4-203ENST00000450894 CDK11AQ9UQ88 783 aaPredicted RBP19.87■□□□□ 0.77
ITGB4-203ENST00000450894 ITGAEP38570 1179 aa19.86■□□□□ 0.77
ITGB4-203ENST00000450894 MYT1LQ9UL68 1186 aa19.84■□□□□ 0.77
ITGB4-203ENST00000450894 BCANQ96GW7 911 aa19.83■□□□□ 0.77
ITGB4-203ENST00000450894 DCAF1Q9Y4B6 1507 aa19.83■□□□□ 0.76
ITGB4-203ENST00000450894 CNGB1Q14028 1251 aaPredicted RBP19.72■□□□□ 0.75
ITGB4-203ENST00000450894 ANP32CO43423 234 aa19.67■□□□□ 0.74
ITGB4-203ENST00000450894 ANP32AP39687 249 aaKnown RBP19.58■□□□□ 0.72
ITGB4-203ENST00000450894 EIF5BO60841 1220 aaKnown RBP19.57■□□□□ 0.72
ITGB4-203ENST00000450894 GLIPR1L2Q4G1C9 344 aa19.57■□□□□ 0.72
ITGB4-203ENST00000450894 SCAF1Q9H7N4 1312 aaKnown RBP19.47■□□□□ 0.71
ITGB4-203ENST00000450894 NEUROD1Q13562 356 aa19.39■□□□□ 0.69
ITGB4-203ENST00000450894 SLC4A1APQ9BWU0 796 aaKnown RBP19.38■□□□□ 0.69
ITGB4-203ENST00000450894 FAM50AQ14320 339 aaKnown RBP19.33■□□□□ 0.68
ITGB4-203ENST00000450894 ZBTB47Q9UFB7 747 aaPredicted RBP19.32■□□□□ 0.68
ITGB4-203ENST00000450894 NPM2Q86SE8 214 aaKnown RBP19.3■□□□□ 0.68
ITGB4-203ENST00000450894 ANP32BQ92688 251 aaKnown RBP19.29■□□□□ 0.68
ITGB4-203ENST00000450894 FKBP8Q14318 412 aa19.28■□□□□ 0.68
ITGB4-203ENST00000450894 CCDC180Q9P1Z9 1646 aa19.26■□□□□ 0.67
ITGB4-203ENST00000450894 TRIM52Q96A61 297 aa19.24■□□□□ 0.67
ITGB4-203ENST00000450894 CANXP27824 592 aaKnown RBP19.22■□□□□ 0.67
ITGB4-203ENST00000450894 ANP32EQ9BTT0 268 aa19.19■□□□□ 0.66
ITGB4-203ENST00000450894 NBR1Q14596 966 aa19.13■□□□□ 0.65
ITGB4-203ENST00000450894 CSRNP3Q8WYN3 585 aa19.11■□□□□ 0.65
ITGB4-203ENST00000450894 ZNF326Q5BKZ1 582 aaKnown RBP19.05■□□□□ 0.64
ITGB4-203ENST00000450894 UPF2Q9HAU5 1272 aaKnown RBP19.03■□□□□ 0.64
ITGB4-203ENST00000450894 HSP90AA1P07900 732 aaKnown RBP19■□□□□ 0.63
ITGB4-203ENST00000450894 HNRNPUQ00839 825 aaKnown RBP eCLIP18.99■□□□□ 0.63
ITGB4-203ENST00000450894 TONSLQ96HA7 1378 aa18.98■□□□□ 0.63
ITGB4-203ENST00000450894 MIER1Q8N108 512 aa18.97■□□□□ 0.63
ITGB4-203ENST00000450894 ZCCHC6Q5VYS8 1495 aaKnown RBP18.97■□□□□ 0.63
ITGB4-203ENST00000450894 BCL11AQ9H165 835 aa18.93■□□□□ 0.62
ITGB4-203ENST00000450894 CCDC136Q96JN2 1154 aa18.92■□□□□ 0.62
ITGB4-203ENST00000450894 DDRGK1Q96HY6 314 aa18.91■□□□□ 0.62
ITGB4-203ENST00000450894 NEFMP07197 916 aa18.89■□□□□ 0.61
ITGB4-203ENST00000450894 DDX10Q13206 875 aaKnown RBP18.87■□□□□ 0.61
ITGB4-203ENST00000450894 MYO15BQ96JP2 1530 aa18.84■□□□□ 0.61
ITGB4-203ENST00000450894 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.83■□□□□ 0.61
ITGB4-203ENST00000450894 ARXQ96QS3 562 aa18.82■□□□□ 0.6
ITGB4-203ENST00000450894 FAM9BQ8IZU0 186 aa18.8■□□□□ 0.6
ITGB4-203ENST00000450894 EEA1Q15075 1411 aa18.78■□□□□ 0.6
ITGB4-203ENST00000450894 TNNT2P45379 298 aaPredicted RBP18.77■□□□□ 0.6
ITGB4-203ENST00000450894 PPM1GO15355 546 aaPredicted RBP18.77■□□□□ 0.6
ITGB4-203ENST00000450894 PABPN1Q86U42 306 aaKnown RBP eCLIP18.75■□□□□ 0.59
ITGB4-203ENST00000450894 TRIM44Q96DX7 344 aaPredicted RBP18.74■□□□□ 0.59
ITGB4-203ENST00000450894 SLC24A1O60721 1099 aa18.7■□□□□ 0.58
ITGB4-203ENST00000450894 ERICH6BQ5W0A0 696 aa18.7■□□□□ 0.58
ITGB4-203ENST00000450894 ABCC9O60706 1549 aa18.7■□□□□ 0.58
ITGB4-203ENST00000450894 SUPT16HQ9Y5B9 1047 aaKnown RBP18.7■□□□□ 0.58
ITGB4-203ENST00000450894 BECN1Q14457 450 aa18.69■□□□□ 0.58
ITGB4-203ENST00000450894 MRS2Q9HD23 443 aa18.68■□□□□ 0.58
ITGB4-203ENST00000450894 TMC1Q8TDI8 760 aa18.66■□□□□ 0.58
ITGB4-203ENST00000450894 IRX6P78412 446 aaPredicted RBP18.65■□□□□ 0.58
ITGB4-203ENST00000450894 PPP4R2Q9NY27 417 aa18.64■□□□□ 0.57
ITGB4-203ENST00000450894 P3H3Q8IVL6 736 aa18.63■□□□□ 0.57
ITGB4-203ENST00000450894 NOP58Q9Y2X3 529 aaKnown RBP18.63■□□□□ 0.57
ITGB4-203ENST00000450894 CLIP1P30622 1438 aa18.62■□□□□ 0.57
ITGB4-203ENST00000450894 GOLGA3Q08378 1498 aa18.61■□□□□ 0.57
ITGB4-203ENST00000450894 CEP162Q5TB80 1403 aa18.59■□□□□ 0.57
ITGB4-203ENST00000450894 NAP1L5Q96NT1 182 aaPredicted RBP18.58■□□□□ 0.56
ITGB4-203ENST00000450894 SALL2Q9Y467 1007 aaPredicted RBP18.58■□□□□ 0.56
ITGB4-203ENST00000450894 EIF4G2P78344 907 aaKnown RBP eCLIP18.56■□□□□ 0.56
ITGB4-203ENST00000450894 RTN4Q9NQC3 1192 aaKnown RBP18.55■□□□□ 0.56
ITGB4-203ENST00000450894 GOLGA6L22H0YM25 854 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms