RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-222ENST00000585867 NISCHQ9Y2I1 1504 aa41.87■■■■■ 4.29
RBFOX1-222ENST00000585867 CCDC180Q9P1Z9 1646 aa36.94■■■■□ 3.5
RBFOX1-222ENST00000585867 ABCC9O60706 1549 aa35.72■■■■□ 3.31
RBFOX1-222ENST00000585867 ZCCHC6Q5VYS8 1495 aaKnown RBP34.97■■■■□ 3.19
RBFOX1-222ENST00000585867 DCAF8L2P0C7V8 631 aa34.9■■■■□ 3.18
RBFOX1-222ENST00000585867 NACADO15069 1562 aa34.63■■■■□ 3.13
RBFOX1-222ENST00000585867 DCAF1Q9Y4B6 1507 aa34.63■■■■□ 3.13
RBFOX1-222ENST00000585867 MYO15BQ96JP2 1530 aa34.56■■■■□ 3.12
RBFOX1-222ENST00000585867 RB1CC1Q8TDY2 1594 aa34.55■■■■□ 3.12
RBFOX1-222ENST00000585867 SCRIBQ14160 1630 aa33.8■■■■□ 3
RBFOX1-222ENST00000585867 UNC13AQ9UPW8 1703 aa33.78■■■■□ 3
RBFOX1-222ENST00000585867 PABPN1Q86U42 306 aaKnown RBP eCLIP33.51■■■□□ 2.95
RBFOX1-222ENST00000585867 BICRAQ9NZM4 1560 aa33.49■■■□□ 2.95
RBFOX1-222ENST00000585867 SHROOM4Q9ULL8 1493 aa33.48■■■□□ 2.95
RBFOX1-222ENST00000585867 CECR2Q9BXF3 1484 aa32.59■■■□□ 2.81
RBFOX1-222ENST00000585867 EIF4G1Q04637 1599 aaKnown RBP32.56■■■□□ 2.8
RBFOX1-222ENST00000585867 BAZ1AQ9NRL2 1556 aaPredicted RBP32.41■■■□□ 2.78
RBFOX1-222ENST00000585867 SMARCA4P51532 1647 aa32.36■■■□□ 2.77
RBFOX1-222ENST00000585867 DNAJC5BQ9UF47 199 aa32.33■■■□□ 2.77
RBFOX1-222ENST00000585867 CC2D2AQ9P2K1 1620 aa32.31■■■□□ 2.76
RBFOX1-222ENST00000585867 MROH2BQ7Z745 1585 aa32.29■■■□□ 2.76
RBFOX1-222ENST00000585867 RSF1Q96T23 1441 aaPredicted RBP32.12■■■□□ 2.73
RBFOX1-222ENST00000585867 ATAD2BQ9ULI0 1458 aa32.07■■■□□ 2.72
RBFOX1-222ENST00000585867 SMARCA2P51531 1590 aa32.04■■■□□ 2.72
RBFOX1-222ENST00000585867 PEG3Q9GZU2 1588 aa32.01■■■□□ 2.72
RBFOX1-222ENST00000585867 WIZO95785 1651 aa31.98■■■□□ 2.71
RBFOX1-222ENST00000585867 NCAPD3P42695 1498 aa31.96■■■□□ 2.71
RBFOX1-222ENST00000585867 BAZ1BQ9UIG0 1483 aaKnown RBP31.84■■■□□ 2.69
RBFOX1-222ENST00000585867 HMGXB3Q12766 1538 aa31.82■■■□□ 2.69
RBFOX1-222ENST00000585867 SUPT5HO00267 1087 aaKnown RBP31.79■■■□□ 2.68
RBFOX1-222ENST00000585867 TOP2AP11388 1531 aaKnown RBP31.63■■■□□ 2.65
RBFOX1-222ENST00000585867 CCDC88BA6NC98 1476 aa31.3■■■□□ 2.6
RBFOX1-222ENST00000585867 CADPSQ9ULU8 1353 aa31.08■■■□□ 2.57
RBFOX1-222ENST00000585867 NESP48681 1621 aa31.07■■■□□ 2.56
RBFOX1-222ENST00000585867 LAMC3Q9Y6N6 1575 aa31.02■■■□□ 2.56
RBFOX1-222ENST00000585867 CFTRP13569 1480 aa30.99■■■□□ 2.55
RBFOX1-222ENST00000585867 PDS5BQ9NTI5 1447 aa30.82■■■□□ 2.52
RBFOX1-222ENST00000585867 PRDM2Q13029 1718 aa30.77■■■□□ 2.52
RBFOX1-222ENST00000585867 ERCC6Q03468 1493 aa30.73■■■□□ 2.51
RBFOX1-222ENST00000585867 FANCD2Q9BXW9 1451 aa30.72■■■□□ 2.51
RBFOX1-222ENST00000585867 KIF21AQ7Z4S6 1674 aa30.68■■■□□ 2.5
RBFOX1-222ENST00000585867 CEP164Q9UPV0 1460 aa30.62■■■□□ 2.49
RBFOX1-222ENST00000585867 MRC2Q9UBG0 1479 aa30.46■■■□□ 2.47
RBFOX1-222ENST00000585867 THOC2Q8NI27 1593 aaKnown RBP30.43■■■□□ 2.46
RBFOX1-222ENST00000585867 URB2Q14146 1524 aaKnown RBP30.37■■■□□ 2.45
RBFOX1-222ENST00000585867 ABCC8Q09428 1581 aa30.33■■■□□ 2.45
RBFOX1-222ENST00000585867 WDR62O43379 1518 aa30.33■■■□□ 2.45
RBFOX1-222ENST00000585867 TOPBP1Q92547 1522 aa30.29■■■□□ 2.44
RBFOX1-222ENST00000585867 DNMBPQ6XZF7 1577 aa30.28■■■□□ 2.44
RBFOX1-222ENST00000585867 WRNQ14191 1432 aaPredicted RBP eCLIP30.27■■■□□ 2.44
RBFOX1-222ENST00000585867 CUX1P39880 1505 aa30.25■■■□□ 2.43
RBFOX1-222ENST00000585867 CUX2O14529 1486 aa30.17■■■□□ 2.42
RBFOX1-222ENST00000585867 SYNJ1O43426 1573 aa30.15■■■□□ 2.42
RBFOX1-222ENST00000585867 TOP2BQ02880 1626 aa30.12■■■□□ 2.41
RBFOX1-222ENST00000585867 CHIC1Q5VXU3 224 aa30.11■■■□□ 2.41
RBFOX1-222ENST00000585867 BIVM-ERCC5R4GMW8 1640 aa30.11■■■□□ 2.41
RBFOX1-222ENST00000585867 FGD5Q6ZNL6 1462 aa30.08■■■□□ 2.41
RBFOX1-222ENST00000585867 POLA1P09884 1462 aaPredicted RBP30.05■■■□□ 2.4
RBFOX1-222ENST00000585867 TRIM41Q8WV44 630 aa29.98■■■□□ 2.39
RBFOX1-222ENST00000585867 SOGA1O94964 1423 aa29.98■■■□□ 2.39
RBFOX1-222ENST00000585867 IFT140Q96RY7 1462 aa29.96■■■□□ 2.39
RBFOX1-222ENST00000585867 RAD54L2Q9Y4B4 1467 aa29.96■■■□□ 2.39
RBFOX1-222ENST00000585867 TARBP1Q13395 1621 aaKnown RBP29.9■■■□□ 2.38
RBFOX1-222ENST00000585867 ABCA10Q8WWZ4 1543 aa29.79■■■□□ 2.36
RBFOX1-222ENST00000585867 ZNF608Q9ULD9 1512 aaPredicted RBP29.79■■■□□ 2.36
RBFOX1-222ENST00000585867 WDR97A6NE52 1622 aa29.76■■■□□ 2.35
RBFOX1-222ENST00000585867 TDRD9Q8NDG6 1382 aaKnown RBP29.76■■■□□ 2.35
RBFOX1-222ENST00000585867 AQRO60306 1485 aaKnown RBP eCLIP29.72■■■□□ 2.35
RBFOX1-222ENST00000585867 EIF4G3O43432 1585 aaKnown RBP29.67■■■□□ 2.34
RBFOX1-222ENST00000585867 GAPVD1Q14C86 1478 aa29.62■■■□□ 2.33
RBFOX1-222ENST00000585867 ABCA5Q8WWZ7 1642 aa29.61■■■□□ 2.33
RBFOX1-222ENST00000585867 KIF27Q86VH2 1401 aa29.6■■■□□ 2.33
RBFOX1-222ENST00000585867 GRIN2BQ13224 1484 aa29.53■■■□□ 2.32
RBFOX1-222ENST00000585867 RUSC2Q8N2Y8 1516 aa29.53■■■□□ 2.32
RBFOX1-222ENST00000585867 PBRM1Q86U86 1689 aa29.5■■■□□ 2.31
RBFOX1-222ENST00000585867 ERICH3Q5RHP9 1530 aa29.43■■■□□ 2.3
RBFOX1-222ENST00000585867 IGF1RP08069 1367 aa29.43■■■□□ 2.3
RBFOX1-222ENST00000585867 SNAPC4Q5SXM2 1469 aa29.42■■■□□ 2.3
RBFOX1-222ENST00000585867 FAM9AQ8IZU1 332 aaPredicted RBP29.39■■■□□ 2.29
RBFOX1-222ENST00000585867 MAGI1Q96QZ7 1491 aaPredicted RBP29.38■■■□□ 2.29
RBFOX1-222ENST00000585867 EEA1Q15075 1411 aa29.36■■■□□ 2.29
RBFOX1-222ENST00000585867 CSRNP3Q8WYN3 585 aa29.32■■■□□ 2.28
RBFOX1-222ENST00000585867 FBLN2P98095 1184 aa29.3■■■□□ 2.28
RBFOX1-222ENST00000585867 ADAMTS12P58397 1594 aa29.29■■■□□ 2.28
RBFOX1-222ENST00000585867 FHAD1B1AJZ9 1412 aa29.29■■■□□ 2.28
RBFOX1-222ENST00000585867 CHMP7Q8WUX9 453 aaPredicted RBP29.28■■■□□ 2.28
RBFOX1-222ENST00000585867 SYNJ2O15056 1496 aa29.27■■■□□ 2.28
RBFOX1-222ENST00000585867 CARMIL1Q5VZK9 1371 aa29.27■■■□□ 2.28
RBFOX1-222ENST00000585867 CUL7Q14999 1698 aa29.26■■■□□ 2.28
RBFOX1-222ENST00000585867 CHD1O14646 1710 aa29.21■■■□□ 2.27
RBFOX1-222ENST00000585867 GRIN2AQ12879 1464 aa29.16■■■□□ 2.26
RBFOX1-222ENST00000585867 PRXQ9BXM0 1461 aa29.14■■■□□ 2.26
RBFOX1-222ENST00000585867 RAPGEF2Q9Y4G8 1499 aa29.14■■■□□ 2.26
RBFOX1-222ENST00000585867 OSCARQ8IYS5 282 aa29.1■■■□□ 2.25
RBFOX1-222ENST00000585867 KIF21BO75037 1637 aa29.01■■■□□ 2.24
RBFOX1-222ENST00000585867 NUP160Q12769 1436 aa28.99■■■□□ 2.23
RBFOX1-222ENST00000585867 CEP170Q5SW79 1584 aa28.99■■■□□ 2.23
RBFOX1-222ENST00000585867 EHMT2Q96KQ7 1210 aa28.98■■■□□ 2.23
RBFOX1-222ENST00000585867 GOLGA3Q08378 1498 aa28.91■■■□□ 2.22
RBFOX1-222ENST00000585867 CLASP1Q7Z460 1538 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms