Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 SIGLEC30P-201ENST00000455569 941 ntBASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 Z69720.1-201ENST00000601483 472 ntBASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 CROCCP1-201ENST00000426910 5675 ntBASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 AC006538.1-201ENST00000567905 1585 ntBASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 AL020989.1-201ENST00000422979 469 ntBASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 DRAXINP1-201ENST00000437611 948 ntBASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 MINOS1P3-201ENST00000457048 203 ntBASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-7A0A0A0MS04 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
TRBV6-7A0A0A0MS04 KRT18P1-202ENST00000452408 1331 ntBASIC14.15□□□□□ -0.15
TRBV6-7A0A0A0MS04 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.15□□□□□ -0.15
TRBV6-7A0A0A0MS04 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 AL391256.1-201ENST00000443260 1855 ntBASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 NUS1P1-201ENST00000446295 882 ntBASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 BNIP3P18-201ENST00000593976 575 ntBASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms