RNA–Protein interactions for RNA: ENST00000426910.1

CROCCP1-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 1, humanhuman

BASIC

Gene CROCCP1, Length 5,675 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP1-201ENST00000426910 DCAF8L2P0C7V8 631 aa29.03■■■□□ 2.24
CROCCP1-201ENST00000426910 NISCHQ9Y2I1 1504 aa28.45■■■□□ 2.14
CROCCP1-201ENST00000426910 SUPT5HO00267 1087 aaKnown RBP28.11■■■□□ 2.09
CROCCP1-201ENST00000426910 SHROOM4Q9ULL8 1493 aa27.71■■■□□ 2.03
CROCCP1-201ENST00000426910 EHMT2Q96KQ7 1210 aa27.38■■□□□ 1.97
CROCCP1-201ENST00000426910 PCGF6Q9BYE7 350 aa26.7■■□□□ 1.86
CROCCP1-201ENST00000426910 PELP1Q8IZL8 1130 aaKnown RBP26.56■■□□□ 1.84
CROCCP1-201ENST00000426910 FAM9AQ8IZU1 332 aaPredicted RBP26.54■■□□□ 1.84
CROCCP1-201ENST00000426910 TTBK1Q5TCY1 1321 aaPredicted RBP26.49■■□□□ 1.83
CROCCP1-201ENST00000426910 APLP2Q06481 763 aa26.26■■□□□ 1.79
CROCCP1-201ENST00000426910 RANGAP1P46060 587 aaPredicted RBP25.91■■□□□ 1.74
CROCCP1-201ENST00000426910 CCER1Q8TC90 406 aaPredicted RBP25.88■■□□□ 1.73
CROCCP1-201ENST00000426910 TRIM41Q8WV44 630 aa25.83■■□□□ 1.73
CROCCP1-201ENST00000426910 CENPBP07199 599 aaPredicted RBP25.82■■□□□ 1.72
CROCCP1-201ENST00000426910 ZEB1P37275 1124 aaPredicted RBP25.8■■□□□ 1.72
CROCCP1-201ENST00000426910 PPARGC1BQ86YN6 1023 aaKnown RBP25.68■■□□□ 1.7
CROCCP1-201ENST00000426910 ERICH6Q7L0X2 663 aa25.67■■□□□ 1.7
CROCCP1-201ENST00000426910 YTHDC1Q96MU7 727 aaKnown RBP25.67■■□□□ 1.7
CROCCP1-201ENST00000426910 ATP1B4Q9UN42 357 aaPredicted RBP25.51■■□□□ 1.67
CROCCP1-201ENST00000426910 HRCP23327 699 aa25.45■■□□□ 1.66
CROCCP1-201ENST00000426910 UBTFP17480 764 aaKnown RBP25.44■■□□□ 1.66
CROCCP1-201ENST00000426910 TRIM26Q12899 539 aaPredicted RBP25.33■■□□□ 1.65
CROCCP1-201ENST00000426910 LOC105371045A0A1W2PR82 267 aa25.3■■□□□ 1.64
CROCCP1-201ENST00000426910 CHIC1Q5VXU3 224 aa25.1■■□□□ 1.61
CROCCP1-201ENST00000426910 NEFLP07196 543 aa25.08■■□□□ 1.61
CROCCP1-201ENST00000426910 MYT1Q01538 1121 aa24.91■■□□□ 1.58
CROCCP1-201ENST00000426910 ITGAEP38570 1179 aa24.86■■□□□ 1.57
CROCCP1-201ENST00000426910 HNRNPUL2Q1KMD3 747 aaKnown RBP24.81■■□□□ 1.56
CROCCP1-201ENST00000426910 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.78■■□□□ 1.56
CROCCP1-201ENST00000426910 MYT1LQ9UL68 1186 aa24.76■■□□□ 1.55
CROCCP1-201ENST00000426910 POLR3GLQ9BT43 218 aa24.63■■□□□ 1.53
CROCCP1-201ENST00000426910 ABCC9O60706 1549 aa24.61■■□□□ 1.53
CROCCP1-201ENST00000426910 DIEXFQ68CQ4 756 aaKnown RBP24.59■■□□□ 1.53
CROCCP1-201ENST00000426910 DAXXQ9UER7 740 aaPredicted RBP24.55■■□□□ 1.52
CROCCP1-201ENST00000426910 CNGB1Q14028 1251 aaPredicted RBP24.55■■□□□ 1.52
CROCCP1-201ENST00000426910 GTF3C3Q9Y5Q9 886 aa24.35■■□□□ 1.49
CROCCP1-201ENST00000426910 PABPN1Q86U42 306 aaKnown RBP eCLIP24.3■■□□□ 1.48
CROCCP1-201ENST00000426910 SLC4A1APQ9BWU0 796 aaKnown RBP24.3■■□□□ 1.48
CROCCP1-201ENST00000426910 BCANQ96GW7 911 aa24.23■■□□□ 1.47
CROCCP1-201ENST00000426910 FAM50AQ14320 339 aaKnown RBP24.1■■□□□ 1.45
CROCCP1-201ENST00000426910 NEUROD1Q13562 356 aa24.09■■□□□ 1.45
CROCCP1-201ENST00000426910 CLSPNQ9HAW4 1339 aa24■■□□□ 1.43
CROCCP1-201ENST00000426910 ACIN1Q9UKV3 1341 aaKnown RBP23.94■■□□□ 1.42
CROCCP1-201ENST00000426910 ZNF316A6NFI3 1004 aaPredicted RBP23.94■■□□□ 1.42
CROCCP1-201ENST00000426910 RTL5Q5HYW3 569 aaPredicted RBP23.9■■□□□ 1.42
CROCCP1-201ENST00000426910 TRIM52Q96A61 297 aa23.87■■□□□ 1.41
CROCCP1-201ENST00000426910 ANP32CO43423 234 aa23.76■■□□□ 1.39
CROCCP1-201ENST00000426910 ZNF326Q5BKZ1 582 aaKnown RBP23.7■■□□□ 1.38
CROCCP1-201ENST00000426910 CDK11AQ9UQ88 783 aaPredicted RBP23.67■■□□□ 1.38
CROCCP1-201ENST00000426910 FBLN2P98095 1184 aa23.66■■□□□ 1.38
CROCCP1-201ENST00000426910 CCDC180Q9P1Z9 1646 aa23.65■■□□□ 1.38
CROCCP1-201ENST00000426910 SCRIBQ14160 1630 aa23.61■■□□□ 1.37
CROCCP1-201ENST00000426910 SLC24A1O60721 1099 aa23.6■■□□□ 1.37
CROCCP1-201ENST00000426910 BCL11AQ9H165 835 aa23.58■■□□□ 1.36
CROCCP1-201ENST00000426910 P3H3Q8IVL6 736 aa23.55■■□□□ 1.36
CROCCP1-201ENST00000426910 ZCCHC6Q5VYS8 1495 aaKnown RBP23.54■■□□□ 1.36
CROCCP1-201ENST00000426910 ZBTB47Q9UFB7 747 aaPredicted RBP23.54■■□□□ 1.36
CROCCP1-201ENST00000426910 DCAF1Q9Y4B6 1507 aa23.52■■□□□ 1.36
CROCCP1-201ENST00000426910 CSRNP3Q8WYN3 585 aa23.5■■□□□ 1.35
CROCCP1-201ENST00000426910 SCAF1Q9H7N4 1312 aaKnown RBP23.5■■□□□ 1.35
CROCCP1-201ENST00000426910 ARID3CA6NKF2 412 aa23.46■■□□□ 1.35
CROCCP1-201ENST00000426910 FKBP8Q14318 412 aa23.44■■□□□ 1.34
CROCCP1-201ENST00000426910 MYO15BQ96JP2 1530 aa23.42■■□□□ 1.34
CROCCP1-201ENST00000426910 NPM2Q86SE8 214 aaKnown RBP23.34■■□□□ 1.33
CROCCP1-201ENST00000426910 CANXP27824 592 aaKnown RBP23.33■■□□□ 1.32
CROCCP1-201ENST00000426910 RB1CC1Q8TDY2 1594 aa23.3■■□□□ 1.32
CROCCP1-201ENST00000426910 DDX10Q13206 875 aaKnown RBP23.28■■□□□ 1.32
CROCCP1-201ENST00000426910 ANP32AP39687 249 aaKnown RBP23.23■■□□□ 1.31
CROCCP1-201ENST00000426910 MIER1Q8N108 512 aa23.23■■□□□ 1.31
CROCCP1-201ENST00000426910 NEFMP07197 916 aa23.21■■□□□ 1.31
CROCCP1-201ENST00000426910 HNRNPUQ00839 825 aaKnown RBP eCLIP23.2■■□□□ 1.3
CROCCP1-201ENST00000426910 FAM9BQ8IZU0 186 aa23.15■■□□□ 1.3
CROCCP1-201ENST00000426910 ZNF777Q9ULD5 760 aaPredicted RBP23.15■■□□□ 1.3
CROCCP1-201ENST00000426910 TONSLQ96HA7 1378 aa23.11■■□□□ 1.29
CROCCP1-201ENST00000426910 HIRIP3Q9BW71 556 aaPredicted RBP23.09■■□□□ 1.29
CROCCP1-201ENST00000426910 IRX6P78412 446 aaPredicted RBP23.07■■□□□ 1.28
CROCCP1-201ENST00000426910 SALL2Q9Y467 1007 aaPredicted RBP23.06■■□□□ 1.28
CROCCP1-201ENST00000426910 NPM1P06748 294 aaKnown RBP eCLIP23.06■■□□□ 1.28
CROCCP1-201ENST00000426910 NBR1Q14596 966 aa23.03■■□□□ 1.28
CROCCP1-201ENST00000426910 NACADO15069 1562 aa23.02■■□□□ 1.28
CROCCP1-201ENST00000426910 ESF1Q9H501 851 aaKnown RBP23.02■■□□□ 1.28
CROCCP1-201ENST00000426910 PLPPR3Q6T4P5 718 aa23■■□□□ 1.27
CROCCP1-201ENST00000426910 CHIC2Q9UKJ5 165 aa22.97■■□□□ 1.27
CROCCP1-201ENST00000426910 EIF5BO60841 1220 aaKnown RBP22.94■■□□□ 1.26
CROCCP1-201ENST00000426910 CCDC136Q96JN2 1154 aa22.86■■□□□ 1.25
CROCCP1-201ENST00000426910 CHGAP10645 457 aaKnown RBP22.83■■□□□ 1.24
CROCCP1-201ENST00000426910 CHMP7Q8WUX9 453 aaPredicted RBP22.82■■□□□ 1.24
CROCCP1-201ENST00000426910 STAG3Q9UJ98 1225 aa22.82■■□□□ 1.24
CROCCP1-201ENST00000426910 MRS2Q9HD23 443 aa22.82■■□□□ 1.24
CROCCP1-201ENST00000426910 CLIP1P30622 1438 aa22.79■■□□□ 1.24
CROCCP1-201ENST00000426910 SENP3-EIF4A1A0A087X0R7 540 aa22.79■■□□□ 1.24
CROCCP1-201ENST00000426910 HSP90AA1P07900 732 aaKnown RBP22.79■■□□□ 1.24
CROCCP1-201ENST00000426910 TMC1Q8TDI8 760 aa22.77■■□□□ 1.24
CROCCP1-201ENST00000426910 ARXQ96QS3 562 aa22.76■■□□□ 1.23
CROCCP1-201ENST00000426910 CEP162Q5TB80 1403 aa22.76■■□□□ 1.23
CROCCP1-201ENST00000426910 BAZ1BQ9UIG0 1483 aaKnown RBP22.75■■□□□ 1.23
CROCCP1-201ENST00000426910 ANP32BQ92688 251 aaKnown RBP22.73■■□□□ 1.23
CROCCP1-201ENST00000426910 KDM2AQ9Y2K7 1162 aa22.71■■□□□ 1.23
CROCCP1-201ENST00000426910 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.67■■□□□ 1.22
CROCCP1-201ENST00000426910 MTUS2Q5JR59 1369 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms